Detail information of Am08G004980.1 Annotation
Gene IDAnnotation
Am08G004980.1 FAR1-related sequence 5
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am08G004980.1mRNAChr084530937645311678+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF03101.18FAR1241092.10E-20
PF10551.12MULE2442962.60E-13
Gene family
Gene familySubfamily
Transcription Factors FamilyFAR1

Gene Ontology
GO termDescriptionCategory
GO:0008270zinc ion bindingMolecular Function
GO:0005634nucleusCellular Component
GO:0006355regulation of DNA-templated transcriptionBiological Process

InterPro
InterPro termDescription
IPR007527Zinc finger, SWIM-type
IPR006564Zinc finger, PMZ-type
IPR018289MULE transposase domain
IPR031052FHY3/FAR1 family
IPR004330FAR1 DNA binding domain

trEMBL
trEMBL termDescription
A0A1S2XKF4 _

SwissProt
SwissProt termDescription
FRS5_ARATHProtein FAR1-RELATED SEQUENCE 5

KEGG
KODescriptionEnzyme
K17604zinc finger SWIM domain-containing protein 3

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G38180 FAR1-related sequence 5
Medicago sativa L.MsG0880041924.01.T01 _
Oryza sativa L.LOC_Os11g19030.1FAR1 family protein, expressed
Cucumis sativus L.Csa013491 _
Glycyrrhiza uralensis Fisch.Glyur000215s00017003.1 _
Codonopsis lanceolataCl_chr01_43410T _
Arachis hypogaea L.AH13G55230.1Protein FAR1-RELATED SEQUENCE 5 like

Expression pattern