| Gene ID | Annotation |
|---|---|
| Am08G004470.1 | zinc finger (C3HC4-type RING finger) family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am08G004470.1 | mRNA | Chr08 | 36715451 | 36717994 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13923.9 | zf-C3HC4_2 | 157 | 195 | 8.00E-08 |
| PF00097.28 | zf-C3HC4 | 157 | 195 | 3.40E-07 |
| PF13920.9 | zf-C3HC4_3 | 154 | 200 | 3.80E-06 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
| GO term | Description | Category |
|---|---|---|
| GO:0006302 | double-strand break repair | Biological Process |
| GO:0004842 | ubiquitin-protein transferase activity | Molecular Function |
| GO:0005634 | nucleus | Cellular Component |
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR017907 | Zinc finger, RING-type, conserved site |
| IPR001841 | Zinc finger, RING-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| trEMBL term | Description |
|---|---|
| A0A072TYL1 | _ |
| SwissProt term | Description |
|---|---|
| TRI65_HUMAN | E3 ubiquitin-protein ligase TRIM65 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G27330 | zinc finger (C3HC4-type RING finger) family protein |
| Medicago sativa L. | MsG0780037741.01.T01 | _ |
| Oryza sativa L. | LOC_Os12g16690.1 | zinc finger, C3HC4 type domain containing protein, expressed |
| Cucumis sativus L. | Csa015055 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur002171s00034486.1 | _ |
| Codonopsis lanceolata | Cl_chr05_06390T | _ |
| Arachis hypogaea L. | AH06G25310.1 | Tripartite motif-containing protein 65 like |