Gene detail

Detail information of Am08G004060.1 Annotation

Gene ID	Annotation
Am08G004060.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am08G004060.1	mRNA	Chr08	30828706	30833191	-

Sequences

CDS:

>Am08G004060.1
ATGAGATATTTTCATCTCAATTTTGTTTTTCTTTCATTGTTTTTGTCTATCACTACTACACATGAGCTACAACTAGCTCAAACTGAAGTTCTATTACAGTTAAGGAAGCATCTAGAATACCCTATTTCCTTACAAATCTTAGAAAATTACAATGGAGACCTTTGTACCCTTTCTCCATCTCAACATCTGAGTATTAAGTGTGAGGCCAATTCAGTAACTGAGCTTAAAATCATGGGGAACACTAAGCCTATGAAGGTCAAAAACTTCAATGGATTTGGAATTCCCAATCAAACACTGTCAATGAGTTTCTCTATTGATTCTTTTGTCACCACATTAACTAGGTTAACAAGCTTAAGAGTCCTCAGTTTAGTCTCCTTAGGAATTTGGGGCCCACTCCCTAACAAAATTCATAGGTTGTCTTTGCTTGAAGTTTTGGATATGAGTTCAAATTTCTTATTTGGTTCTATTCCACCAAGGATAGTTACATTAGTGAAGCTTCAAACACTAACACTTGATGACAATTATTTTAATAGTACATTATCTAATGTGTTTGATAAATTGTCTAGTCTAAATATCTTGAGTTTGAAGAACAATCACTTTAAAGGTTCATTCCCTTCCTCACTTTGCCAAATCAAGAGACTTGCTGATATTTCATTGTCACATAATGAACTTTCTGGTGGATTGCCTGATCTTATCACTCTTTCTGGTTTACATGTATTGGATTTAAGAGAAAATAGTCTGGATTCTGAATTACCATTGATGCCTAAGTCAGTGGTCACAATATTGCTAAGTGGAAATTCATTCTCAGGTGAGGTGCCTTTTCAGTTTGGTGAATTGAATCAGCTTCAACATTTAGATATTTCATCAAATCATCTAAGTGGGATTCTTCCATCTGGTTTATTTTCTTTGCCAAACATTAGTTATTTGAATTTGGCTAATAACGTGCTAAGTGGTGAACTTCCAAAGAAACTAGAATGTGGAAGTAAACTTGGATTTGTGGATGTTTCTAGTAACAAGTTAAGTGGTGTACCTCCGTCTTGTTTGGAAAGTGGCTCTGATAGAAGAGTTTTTAGATATGGTGGAAATTGTTTATCTGCTGATTCTCAACCTCAGAAGAAAGGTTCTTATTGTGAAGAGTCTAGTTCAGGAAGGAAGAAGTTTTGGAGATGGGGAATAGCTGCAGCGGTTGTCGTTGTCGTCGTTGTAGTTGTTGTTTTTGTGGTTGCATTTGGAGTTTTGTTTTACAGAAAAAAATGTGATTCAAAAGAGATATATAGGCATGAGATGTTGCCAAAGATTGTTCAAGATAACTCAACAACTGGAGTTTCCTCTGAAATACTTGCTAGTGCAAGATTCATTTCTCAAACAATGAAGCTAGGGACACAAGCGAATCCGAGCTGTCGACAGTTTTCAATTGAAGAGTTGAAGGAAATCACAAGAAACTTTGATTTCTCAACTTATATTGGTGAAGGATCCATAGGAAAGCTGTACAAAGGCAAACTAGAGAATGGATCTTACGTGGTGATACGATCAGTGGCTCTGAAAAAGAAGTTCTCAATGCAAAATCTTACAGTTAAGTTGGATTTACTCACAAAGCTTCACCATCCAAATTTGGTTAGTCTATTGGGTCATTGTATTGATGGTAGTGGACAAGATGATACTACTAGTACCCACAAACTTCATCTTGTATACGAGTATGTGCCAAACGGGAATTATCGTACGCACCTCTCAGAATTTTCAGCAGACAAGGCACTAAAATGGCCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCTGTGCATTTTTTGCATACTGGATGTATACCTGGTTGTTTTAGAAACCAATTAAAGACGGACAATATTTTACTAGATGAACATCACATTCCCAAACTAAGTGATTATGGTATGTCCTTGATTGCTGAAGAGATTGAAAACTTTGAGGCGAAGGGAGAGAATCCAAAATTTCGCCAAAGAGAAATAGTAGATGATGATGATGTTTATAATTTTGGATTCATATTGTTTGAATCACTTGCTGGACCCATAGCAAGTGAGAAAGGTGAAGCATTTTTTCTTGATGAAAAGGCATCCTTTGACAGTCAAGATGGTAGAAAAAGAATTGTAGATCCAGTAGTGTTAACCACTTGCTGTCAAGAATCTTTATCAATTGCAATATCTATTACAACCAAATGCATATCTCAAGAACCTTCATCTCGTCCCTCTTTTGCGGATGTCCTTTGGAATTTACAATATGCAGCTCAAGTTCAAGCTGCAGCAGATGCAGATTCTATATCCTAG

Protein:

Promoter(3k):

>AM08G004060.1
TGCATATAATGCACTTCATCATAAGTCTTGGAGACAGCATCTCAAAATCGCTCAGTCACGCATTCCAATTCAATTACTTCCAAAATCATGTTATTATGGGAACCGCTTCCGAAATCCAAAAACGGACATGTGACTGCAATGGCATATCATTTGAGTGTTTGTTTTTTAGATTTCATAAGTCTAGAAAAGTAAAAGCAACACTACTTTCTTTTTAGGTAACAAACTTCATTCGGTTGATAATGAAATCATGGATACAAGTTATATGAAGTGAGTTAGGTTAAATATTTCCAAACCACATACTAAAATTAACAACTCTAAGTGAAACTACTACACATGAATAATGAACATTGAAGCCATTACACTTAGAATGTGTAGAGACCATAAGGACATAACCAACCTAAACATGACGACCTAACATCCAAATTATCAGTAACTTCCACTCCTTAGTAGAGGTAATCAGTAATTAAGATGCCATAGTATTTCTCCCAAGCCAGTTACAAATGATAAATTTGCCTTGTGTATACTCTATTCGATTATTGTTGATCTCAAGATTAACCTAGCTTGTCCTGAGAACCAGAGGCCCTATGGTAATTAGAGAGGGCATCGAAAGAGGTGTCAGCCCCAAAAGTCTTAACACTCACCATATAATACAACAAAGTCCGCCACCAAGTGCTTAGGCAGTCAGAAGTTCTATGAGGACTTTCAGAAAACATCATATATGCATCTTTAGGCCAAAAAAAATGCTGGAACACAACATAGAGCAGAACTCCCATATATACACCAGAAAGATGCACAACGACCAGAAAACCAGGAAAATCGTGGTGAAGCCATTGGTGGCCAAAGGGGAGCCAAGAAGATAGATAAAGGATAAGCCATGACTGACCTGAACTGTATAAGGATTTGCGGAGGCAGAGGATCAATTCAGGGCTTCCTCACTAGGGGATGGTGGTGGCTCGGACGGGGCTGTGGTTAAGGGTAGTATTGAGTTGAGGGTTATGTTGGGGAAATGATAGGGAGGGGTTGCGGTGGTGGCTTTGCAGTGACAAGCCCCCCAAGCAATGGAAAAGGGGTCTGATGAAGGGTTTAGGGAGGAGAGGGATGAAGTGGATGGGTGAGACGAGGAGGAGGTGGCGAGGTGTAGGAAGTGAAGTTACTTACAAAATGGAGAATGGCCAAGGACCTACCAGCGAAGCCCACACAAGGAGGGAGATGGCCTCCACAGAGGGAGGGAAAGCGACCTTCACAGAGGGAGAGGAAAGACCCATGGCATGAAGGTAGGAACCCTCGGCATGCATATAAAAGCAAGACTAGTTAAGTGATAGAATTATGGTGATAAAATTGATTTTTGTTATCAATTCATAAAATTCTAGCAAATGTGATAGAAGTGAAAATTCTTAATTTTTGTGTTAAATAAAATTAATCCTAACCGTCAATTCATAAAATTCTTTATATTTATACATTAAAATGGATTCTATTTTTGTTATCAAAAAAATTAGTTTTTCTGAAGTTATTTTTAAAATATCATTATCAAACACAAATAATTTTTCTAAATTTCAGTCTTTTTAAAATTGATTCTTTCAAAATCAATTATATTAAAATCTAAAACCAAGACCTAAAATCATAAGAAATGAAGGCTACCAAAGAAACAAAAGCATAAGACAAACAAACGATGTGCATATATTTTAAGTTTGGGCACATGAGCCATCACAAGTGGATTAGGTTATTTTATGGCTTCACTCACGAGTCAGGTGCACCAAATAAAAAAAATAGATACACCCATACCTACATATATACTATTTAAAAATAGTTGTACCATACTCTAACTACTTTGAAACTTCAACTTGCATGATTCCAAAGTATCTAATTTTTTTATTTCTAAGATTAATCCAAATCCAAAACCTTAGTATTAATCAAATTGTGACCACCACCACCAACGGCGTTGATTCGAGCGGTAATTGAGTTAGGATTTCACTCGAAAGTTTCGAGTTTGAATCTTAAGTGTGGTAGAAACTCTATTGATTCTAATTGTAAATGCAAGTATACTAAATGAGCTCAGTTTTCGAAATAAATTAGTTACTAACAAGTTGATTGATATTACGCACCGATGTCACGGTAAAAAAGAAAACGAATTGTGAAGTAGGGGTGGACACCGGTCAGTTACAGATCTACCCATTTAAACCGACAACCTATTAAACCGACTTGATCTACCCGTTTTTGCATTTTATAGATCAGATTGTTCGGATTCCGGGCGGGTCGGATGCTTTTGTCCACCCTCTATGAAGGTGAGAGACGGTGTTATTTGTTGTTGTTGTTGACGTTTCCCACACGACCGTCCAGTATTTCATGGTCTCCTCCTGCTGTCTCATTCTCCCATTAATAGCCAGTTCACAAGATGCAATGAGGCACAGTAAATGCATAATAGTATAAAATGCATTTAATTCAATGCTTCTTTCCTTCAACTACTTCCATTCTCATCCTTCACACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATTCAACACCACTTTTCATTCTTCAAGCAATAATTTCCACCCTAATCCAACACCACTCCTTGTTTCCCAAAATTCTCTACTTCATTGCTTCTTTTGTTAGCTTCCAAATGGTGGGTCTTTCTTAGTTTTTCTTTGTTCACTTTTATGTTCTTTCCTTTCTAAGCTTTGCTTAATGGTCCATGTGATATAATTCTCTCTTTTCTTTCTCATGGTTTTTTTTAATAGCCAACACCCCATTAGGCATCTTTCAAAGTCTTTCTCTTTTCATCAATGAAGCTATGCCTCTTGTATATCTAAGAACTTCAACCTTGGAGCAAATGATGCATTGTTTTTAACCTCTAGTTCAATACCAAATTTCTCAAAAAAAAAGTGGCCTTTTCAGGGTAATTTGAAAGTTCAAGCTTTTTTTTTGTTTTTAATTTTCTTATTTGTCTTGTTGAATTTGTTAGCTAAAGTTGTTGTTCAAAGTTAGATCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	484	747	9.50E-22
PF00069.28	Pkinase	485	746	2.60E-21
PF13855.9	LRR_8	165	224	6.20E-16
PF13855.9	LRR_8	259	316	6.20E-16

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.5:RLK-Pelle_LRR-VI-1

Gene Ontology

GO term	Description	Category
GO:0005524	ATP binding	Molecular Function
GO:0000165	MAPK cascade	Biological Process
GO:0009755	hormone-mediated signaling pathway	Biological Process
GO:0033612	receptor serine/threonine kinase binding	Molecular Function
GO:0038023	signaling receptor activity	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
G7L4A4	_

SwissProt

SwissProt term	Description
Y3037_ARATH	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G14210	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0780037281.01.T01	_
Oryza sativa L.	LOC_Os11g20360.2	expressed protein
Cucumis sativus L.	Csa005983	_
Glycyrrhiza uralensis Fisch.	Glyur002283s00035200.1	_
Codonopsis lanceolata	Cl_chr05_02520T	_
Arachis hypogaea L.	AH16G31110.1	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 like

Expression pattern