Detail information of Am08G003720.1 Annotation
Gene IDAnnotation
Am08G003720.1 Pentatricopeptide repeat (PPR) superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am08G003720.1mRNAChr082852683928530144-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF01535.23PPR1992286.30E-43
PF01535.23PPR2993286.30E-43
PF13041.9PPR_21962443.60E-35
PF13041.9PPR_22963463.60E-35
PF12854.10PPR_12963253.80E-23
PF20431.1E_motif4174763.20E-16
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0043231intracellular membrane-bounded organelleCellular Component
GO:0008270zinc ion bindingMolecular Function
GO:0008233peptidase activityMolecular Function
GO:0051301cell divisionBiological Process
GO:0006508proteolysisBiological Process

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR046960Pentatricopeptide repeat-containing protein At4g14850-like, plant
IPR002885Pentatricopeptide repeat
IPR046848E motif

trEMBL
trEMBL termDescription
A0A072TZ27 _

SwissProt
SwissProt termDescription
PP367_ARATHPentatricopeptide repeat-containing protein At5g06540

KEGG
KODescriptionEnzyme
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Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G06540 Pentatricopeptide repeat (PPR) superfamily protein
Medicago sativa L.MsG0780037457.01.T01 _
Oryza sativa L.LOC_Os11g29360.1pentatricopeptide, putative, expressed
Cucumis sativus L.Csa001542 _
Glycyrrhiza uralensis Fisch.Glyur001569s00034159.1 _
Codonopsis lanceolataCl_chr01_11820T _
Arachis hypogaea L.AH11G25680.1Pentatricopeptide repeat-containing protein At5g06540 like

Expression pattern