Gene detail

Detail information of Am08G001880.1 Annotation

Gene ID	Annotation
Am08G001880.1	Leucine-rich receptor-like protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am08G001880.1	mRNA	Chr08	11020446	11023970	+

Sequences

CDS:

>Am08G001880.1
ATGATGACAAGTTTTCATCACTTTCACTTGAAAGTAGTGTTGTTAACTTTGCTGATTTCATTGCTGACATGTTATGGAAACAACAATGATATGGCTATTCAGTTGAATGATGATGTTCTTGGTTTGATTGTGTTTAAATCTGACCTTCAAGACCCTTCTTCTTATCTATCTTCATGGAATGAAGATGATCTAAATCCATGTTCATGGAAGTTTGTGCAGTGCAATCCAAAGAATGGAAGAGTTTCACAAGTGTCATTAGATGGCTTGAATTTATCTGGTAAGATAGGAAGAGGTCTTGAGAAGTTACAACATCTAATGGTATTGTCTCTTTCTCATAACAATTTGAGTGGTAATATTAGTCCTTCTCTCACTCTTTCTACTACTCTTCAAAGACTAAACCTTAGTCATAATTCTCTTTCTGGTCCTATTCCTACTTCTTTTGTTAACATGAGTTCAATGAGATTTCTTGATCTATCTAAGAATTCATTCTCAGGAACAATTCCTGACAACTTTTTTGAGATTTGCTTTTCACTTCATCAACTTTCTTTAGCTTGGAATATGTTTGAAGGACCAATTCCTAGTACAATATCTAGATGTTCCTCATTGAATAGTCTTAGTCTTTCTAATAACCATTTCAGTGGTAATGTGGATTTTACTGGAATTTGGTCATTGAATAGGCTTAGGAATTTGGATCTATCCAACAATATTTTATCTGGTAACTTGGTTAATGGAATTTCAGCTATACATAACTTGAAAGAGATTTCATTACACAACAATCAGTTTTCAGGTTCATTACCTAATGATATTGGACTATGCTTGCATTTGAATAAGTTGGATTTTGGAAATAATCAGTTTAGTGGAGAACTACCAGAATCACTTAAGAGCCTTAATTCTCTAAGGTATTTAAAGGCATCAAGAAATCTTTTCTCTGGTGAATTTCCTAAGTGGATTAGTGAAATGACTAGTTTGGAATACTTAGAGCTTTCAAATAATCAATTCCATGGACTCATTCCACAGTCAATAGGGGAGCTGAGATCATTGACTTACTTCAGTGTTTCAAATAACAAACTTGTTGGAAACATTCCAGAGGGTTTGTTTGGTTTAGGATTGGAGGAAATGGATTTTTCTCATAATGATTTGATAGGTTCAGTTCCAGCAGGCTCAAGTAGGCTATTAGAAACTCTCACAAAATTGGATCTTTCGGATAATCATCTCCAAGGGAATATTCCTGCAGAAATAGGCCTACTTTCAAAACTAAGATATTTGAATTTGTCTTGGAATGATCTTCATTCACAGATTCCTCCTGAGTTTGGCTTACTTCAGAATCTAACAGTTTTGGATCTTCGAAACAGCGCCTTGTTTGGTTCTATTCCAGCTGATACATGTGATTCAGGCAACTTAGCTGTTCTTCAACTTGATGGAAATTTATTGAAAGGGTCTATTCCTGAAGAGATTGGGAATTGCACATCACTTTATTTGCTGAGTTTGTCACACAACAATTTGAGTGGTTCAATACCAAAGTCAATGGCAAAGCTAAGCAAGCTCAAAATCCTCAAATTGGAATTCAATGAACTAAGTGGCGAGTTACCAATGGAACTTGGAATGCTTCAAAATCTTCTTGCTGTAAATATATCACATAACATGCTCACAGGAAGGCTTCCAACTAGTACTATATTTCAAAACTTGGACAAAAGTTCCTTAGAAGGAAACTTTGGTCTTTGCTCACCATTGCTAAAAGGTCCATGTAAGATGAATGTCTCCAAGCCTCTAGTTCTTGATCCACATGCCTTTAACAACCAAATGGGTTCTCAAAGGCAAAGAAATGAATCTGATGTGTCTAGTCCAATTCATCACCACAGGTTCCTTAGTATTTCTGCTCTTATAGCAATTTGTGCAACATTTGTCATTTTATTAGGAGTTATTGCTGTTAGCCTACTCAATGTTTCTGTAAGGAGAAGGTTATCATTTGTGGATAATGCTTTGGAAAGCATGTGTTCAAGCTCTTCTAGATCAGGAACTACACCAACAGGAAAACTTATTCTGTTTGATTCTCAATCCTCACCAGAATGGATCAGCAATCCAGAATCATTACTCAACAAGGCATCAGAGATTGGAGAAGGAGTTTTTGGAACAGTTTACAAGGTTTCATTAGGATCACAAGGTAGAATGGTAGCAATCAAGAAGCTAATCACATCAAACATACTTCAATATCCAGAAGATTTTGATAGAGAAGTTAGAATCCTAGGCAAAGCAAGGCACCCAAATTTGATAACACTTAAAGGATACTATTGGACTCCTCAACTACAGCTTTTAGTATCTGAATATGCACCAAATGGTAACTTGCAATCCAAGTTACATGAAAGGCTTCCTTCAAGTCCTCCACTTTCTTGGGCTACAAGATTCAAGATTTTACTTGGAACAGCAAAGGGTCTTGCACATATACACCATTCGTTTCGTCCACCGATAATTCATTACAACATAAAGCCAAGCAACATCTTACTTGACGAGAACTTCAACCCGAAGATATCGGATTTCGGGTTGGCTCGGCTTCTGACAAAGCTGGATAGACATGTGATGAGCAATAGGTTCCAAAGTGCATTAGGATATGTGGCACCAGAATTAGCATGCCAAAGCTTAAGAGTGAATGAGAAATGTGATGTATATGGATTTGGGGTAATGATTCTTGAGCTAGTAACAGGTAGAAGGCCAATAGAGTATGGAGAGGACAATGTGTTGATATTGAATGATCATGTAAGGGTTTTGCTTGAACATGGAAATGTTTTGGAATGTGTGGATCCAAGCATGAGTGAATATCTTGATGATGAGGTTTTGCCAGTTCTGAAGCTAGCAATGGTTTGCACTTCTCAAATACCTTCTAGCAGGCCTACTATGTCAGAAGTTGTGCAAATATTGCAGGTCATCAAAACTCCAGTTCCTCAAAGGATGGAAGTATTTTGA

Protein:

>Am08G001880.1
MMTSFHHFHLKVVLLTLLISLLTCYGNNNDMAIQLNDDVLGLIVFKSDLQDPSSYLSSWNEDDLNPCSWKFVQCNPKNGRVSQVSLDGLNLSGKIGRGLEKLQHLMVLSLSHNNLSGNISPSLTLSTTLQRLNLSHNSLSGPIPTSFVNMSSMRFLDLSKNSFSGTIPDNFFEICFSLHQLSLAWNMFEGPIPSTISRCSSLNSLSLSNNHFSGNVDFTGIWSLNRLRNLDLSNNILSGNLVNGISAIHNLKEISLHNNQFSGSLPNDIGLCLHLNKLDFGNNQFSGELPESLKSLNSLRYLKASRNLFSGEFPKWISEMTSLEYLELSNNQFHGLIPQSIGELRSLTYFSVSNNKLVGNIPEGLFGLGLEEMDFSHNDLIGSVPAGSSRLLETLTKLDLSDNHLQGNIPAEIGLLSKLRYLNLSWNDLHSQIPPEFGLLQNLTVLDLRNSALFGSIPADTCDSGNLAVLQLDGNLLKGSIPEEIGNCTSLYLLSLSHNNLSGSIPKSMAKLSKLKILKLEFNELSGELPMELGMLQNLLAVNISHNMLTGRLPTSTIFQNLDKSSLEGNFGLCSPLLKGPCKMNVSKPLVLDPHAFNNQMGSQRQRNESDVSSPIHHHRFLSISALIAICATFVILLGVIAVSLLNVSVRRRLSFVDNALESMCSSSSRSGTTPTGKLILFDSQSSPEWISNPESLLNKASEIGEGVFGTVYKVSLGSQGRMVAIKKLITSNILQYPEDFDREVRILGKARHPNLITLKGYYWTPQLQLLVSEYAPNGNLQSKLHERLPSSPPLSWATRFKILLGTAKGLAHIHHSFRPPIIHYNIKPSNILLDENFNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPIEYGEDNVLILNDHVRVLLEHGNVLECVDPSMSEYLDDEVLPVLKLAMVCTSQIPSSRPTMSEVVQILQVIKTPVPQRMEVF*

Promoter(3k):

>AM08G001880.1
CCATGCATAAAAGGCTTTAAATTCTGCAAACCAGTGGTCTCTGTTGATGGAACATGGTTGTATGGTAGGTACAAAGAGGTTCTTCTTTTGGCAATCGCACAAGACGGAAGAAACGGAACCTTCCCAATTGCGTATGCAGTTGTCGAGGGTGAGACAATGGAGGCTTGGTATTTCTTCCTATCTCGTTTAAGAGAGTTTGTGACACCACAGGAGGGTCTTTGTTTGATATCGGATAGACACGAGTCTATCAAAAGTGCTGTTAGGCGTCTAAACACCAACTGGAAACACGTCTTTTGTATTCGCCACATAGCACAGAACTTCATGAGACACTTCAAAAACACTCCTGCCAGGAAAGATCTCATCAATATGGGTCAGTATCTTTGAAACTTTTTTAATTTTTTATTCTCTATTTTCCATTCCATAATTACCAACATCTTACTTTACTTGCTTCAGCATACTCAATGACGGAAAGATCTGCCATTCACTACAAAAATAAAATTGCTGACGAACTAGGTCCTGATGGGGTGGCTTGGGTTGAAGACATTAACCCAGAACAATTGTTGCTGTGGTGCGATGGAGGTTCCCGTTGGGGGCACATGACAACAAACCTTGCAGAGTGCATCAACAATGTCCTTAAGGGGGTGCGTAATCTCCCTATCTGTTCATTGATACATGCAACATATTTCAGGATGAACGAGATTTTTGTCAAACGGGGAACACAGGCACAGGCGATGATGACATCCGGAACAATGTTGTTTGAAAAATTGTTGAAAAACATTGCCGAAAACATTAAAGTCTCAAAAACGCATGGCGTTGCAATTCACGATCGTGCCAACCAATTGTTCCGAGTTCAGGAACTTGCACGACCACAAAGTGGTAGACCTTCTAGCACATTTGTGGTCGACTTTAGAGCAAAAACCTGTGAGTGTGGGGAATTCCAGGCACTTCATTACCCTTGTTCACATGCAATCGCAGCATGCGCAAAATGCAATTTCGACCATATGAAGTTTGTGGATCCACCGTACACAATGCATAATGTTTTCAATACTTACATTGTGGTGTTCCCACCCTTGCCAACTGAGACCTCATGTCCTGATTTCAATAGTATTGAACTACAGCATGATCCAACTAAACGAAGAGATAAAAAAGGCCGTCCACAGTCTACCCGTATTCGTACAGAGATGGATCAAAGAGAAACGGGTACCCGCACCAAAAGATGCGGAATTTGTAGAAATGAGGGTCACAACAAAAATAACTGCCCTAACCGCAATGTCAACTAGTCACATTTACTACTACTGTTATTTTCGTATTAGTCTTTTAAATCAATTCATGTCTTTTAATGTGACAGTTAAATTTATATTTTTTTTAAATAATTAAATTTAGTATAAATAAGTTTACTAATTATTCTAATTATTTAAATTAATTATTGTAATTAAATTAAATTAATTTATATATTAATCAAATTAAATATAAGAAATTTAAAAAAATAAAAAAACGCAGTGCAGAACTCACCCTGGTGGGGGGGGGGGGGGCGAGTTCTACACTAGAAATAAAAAAATTTTGCAAAATTTTAGTTTAGAACTCGGTTTGGTGGGGGCGAGTTCTCCACTTAAAAAAAAAGTGGGTTACTTTGGTATATAATGTAGAAAGTGTAGTATTTAGGTAAAAAATTTTTTTTTTTTGGTATGGAATGGTTTTTTTGCCTATTTTTGTATATATAGTCTGCACATCATAGCAAATAGAATATTTTTTTGAAATTGAACACCTCACTCTCACTCTCTATCTCTTTCTCTCTCTCATAAACCAGAAACGAAATTGACTCTACCAGACCAAAGATTCCTTTTCTCTAGATAGAAGGACTAAACCACATGAAAATTTGCAAAGACAAGACTTGGAAGTTGGAAGTATATTAATTTGCACAGAGTATGCATTATTTTTATTTTTCCAGCTAAAAAAAACCACCTTACTACAACACTCAAAGATCCTCTTTATAGAAGAAGCATCATCAAAATCAATGCACCATATCATATCATTCCTAAAATAATTGTCTCACAAATAAAATACTATTTCCCATTTGGATATGATAGTAAAAGCACAAAAACTCACAAGCAAGCATCAACACATATACATGTATGTACACAAAATTATTAAAAAGTGACTGAAATGATGTGGCAAAAGTGGTAGGTACTTGGGTCACTTAATCATTTTGGTCCTGGATTCGATCCTTGGCCGGTGCATATGAAAAAACATTTGTTGGGAGAGGTCAACCCTTAAATGGATCTCCGATACTACAAAAGATTAGTCTCCACAATTGACATGGAGAATACAATGGTTTACCAAAAAAAAGTTATTAAAAAGTGCAAACCATACCAACATTACACAATCAAGTAGGGATCTGGTTTGCGTGCGGTCAGAAAATCCATGCAGTCATGCAGCCAATAGTTTGCGGTCGTCTGATTTTGATCGGAAGGTCCAGATTTCCAATTCAAATATAATATTAAGCAAAAATAAGCAAAAATAAAAAAAAAATTGTTCTTAAAATCCGGACTGTCTGATCTTAATCGGACAACTACTATCTCGCTGACTGCATGCAACTTCGACCGCACCTTATCCAAATTCATCAAGTAGTGAGAGCGAAAGCACAAGGAGCTAGAGGTTCCAAGACACGACAAAGCCTTATGTTTTGACAACAACCTTGTAAGTTGTAATGGGTTGGCAATTTGTCAGTAGCTTAACCATGTTTGTCACGGACTACACACTATAACTTTACCATATTCACACAAAATTAACTTTCTCAATAGCCTATCATATCTTACACTATTTTAGTAAAAGTAACCCTTTCTCCTTCTCGTGAATAATCACACATGTAATATCATTTTCAATGAGTTGGTTTAACTGTAATAAGTAACAGATATCTACCATTCTTTACATTTTTCACATATCATACATCATACACTATCTTTAAGAAAGAAAAAAAGAAGAAACTAAACTATAGTCTTC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	700	969	1.80E-44
PF07714.20	PK_Tyr_Ser-Thr	700	971	9.20E-38
PF13855.9	LRR_8	104	162	6.40E-37
PF13855.9	LRR_8	314	357	6.40E-37
PF13855.9	LRR_8	370	429	6.40E-37
PF13855.9	LRR_8	466	525	6.40E-37
PF08263.15	LRRNT_2	36	75	2.60E-11

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.3:RLK-Pelle_LRR-VII-1

Gene Ontology

GO term	Description	Category
GO:1990904	ribonucleoprotein complex	Cellular Component
GO:0005840	ribosome	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0006412	translation	Biological Process
GO:0003735	structural constituent of ribosome	Molecular Function

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR046959	Pollen receptor-like kinase 1-6/SFR4-like
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0AAN9JB15	_

SwissProt

SwissProt term	Description
Y3804_ARATH	Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G28040	Leucine-rich receptor-like protein kinase family protein
Medicago sativa L.	MsG0380016713.01.T01	_
Oryza sativa L.	LOC_Os01g72700.1	expressed protein
Cucumis sativus L.	Csa002958	_
Glycyrrhiza uralensis Fisch.	Glyur000039s00004228.1	_
Codonopsis lanceolata	Cl_chr08_29880T	_
Arachis hypogaea L.	AH14G39120.1	Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 like

Expression pattern