| Gene ID | Annotation |
|---|---|
| Am08G000160.1 | plant U-box 13 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am08G000160.1 | mRNA | Chr08 | 1985251 | 1990715 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF04564.18 | U-box | 613 | 683 | 5.50E-15 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | U-box |
| GO term | Description | Category |
|---|---|---|
| GO:0004842 | ubiquitin-protein transferase activity | Molecular Function |
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0008270 | zinc ion binding | Molecular Function |
| GO:0016874 | ligase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR007527 | Zinc finger, SWIM-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR003613 | U-box domain |
| IPR045210 | PUB protein, U-box domain, plant |
| IPR016024 | Armadillo-type fold |
| trEMBL term | Description |
|---|---|
| A0A072U6K1 | _ |
| SwissProt term | Description |
|---|---|
| LIN1_LOTJA | Putative E3 ubiquitin-protein ligase LIN-1 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G46510 | plant U-box 13 |
| Medicago sativa L. | MsG0780035953.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g49500.1 | U-box domain-containing protein, putative, expressed |
| Cucumis sativus L. | Csa019424 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000797s00025506.1 | _ |
| Codonopsis lanceolata | Cl_chr06_04820T | _ |
| Arachis hypogaea L. | AH14G39430.1 | Putative E3 ubiquitin-protein ligase LIN-1 like |