Gene detail

Detail information of Am07G015870.1 Annotation

Gene ID	Annotation
Am07G015870.1	heat shock transcription factor C1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G015870.1	mRNA	Chr07	112573210	112574564	-

Sequences

CDS:

>Am07G015870.1
ATGGAGCAGAACAACGTGATCGCACCGTTCGTTTTGAAGACTTATCACATGGTTAACGATCCCACCACCGATAGCCTCATCACGTGGGGCCCAGCTAACAACAGTTTCATCGTCCTCGACCCCCTCGATTTCTCTCACTCTCTCCTCCCTATTTTCTTCAAACACAACAACTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGTTTCAGAAAGGTTGATCCGGATCGATGGGAGTTTGCTAACGAGTGGTTCCTACGAGGACAAAAGCACTTATTGAAAAACATCGTTAGAAGGAAGCACGGTGGAGGAGGAAGTGTAAGGATTAATAATAATAGTAATTCTCTGTCTTGTATTAAGTTTGAGGATTTTGATGATGAGGATATGGTGATGGAGATAGCTAAGCTAAAAGAGGAACAAAGAGCATTAGAAGAAGAGCTTCAAGGGATGAACAAGAGATTGGAAACAACGGAAAAACGACCACAACAAATGATGTCTTTTCTCTGCAATGTCGTGGAGGATCCTCAAGTTCTATCTAGGATACTTCTTGAGAGAGAGAAGAAACAACTTGCTGAGAAGAAGAAACCACGGTTGATATCGGCGGAAACTGTGGCGACGGCCTCCACGTCTTCTTCCTCGTCGTCCGGTTTGGCGGTTGTCAATTATGTTAAGACTGAGTTCGAGGAAGACGAGGCAACTGTTGGGAATAATATGATGTCTTCTTCGCCGGAGACGGGGTTTGAAATTGATTATTTCCGCCGTGCGCCGCTGAGGGAGGAGACACCTACGGCGGGTTGGTGGGGGAAGATGCAGGATGGGCAGCGTGGTTTTTTTGGGTATGAATATGATTGCGTTAATGTTCCGACGCCATTAACGGTGGTGTCTCCGACGATTTCGCCGCCCCCGTTAATGGGGCGTGTGGGCATTTTTAGTGAAATGGCGGCGGATAATAGTTCGCTGCCACCTTATCCGTTTTCGCTGTTAGAAGGTGGCTTTTAG

Protein:

Promoter(3k):

>AM07G015870.1
CAAATTTTGACATTTGTCACAATTTAGGGGCAAAACAGACAATTCAGCACATAAAGACAAAATGATACAGTATCACTACAGTGCGCTACAGTGACGTTTCTGACGTGCTACAGTATCACTTATGTCACTCTACAGTACGCTACAGTGACGTTTCTGACGCGCTACAGTACCAATACAGTTTTTTTTTTTAAATTCAATTTTTTTTAAAAAAACTGATTTTTTTTAAAAAATTATACACTTCTTTTTTTAATTTTTTTTTAAAAAAACGGTTGTCAATATTTTTATAAAAATAATTAGTCACTATAAATCAATTTTCACTATTTTTATAATCTACTCAAACTATTAAAATTAATAAAATAATTAGTCACTATAAATCAATTAGGCACTATCCATTGTCAAAAAAAGAATTGTAAAAAAACTTTAACCCCTACCAAAAACTACAAAATAACTACTAAAACTAATCAATTTAACTACTTTTGTTAAAATCAATCAATTTAACCACTACAAAAAATTACCAAATAACTATTTTATAATTACTAAAAAAGAGTAAAATGCCAACGGGAATGCCAACGAGAGTGGCAACGAGAGCGCCAATGGGAGTGGTAACGAGAGCTCCAACGGGAGAGGCCACAGAAATGGCAACGATAGAGGGACAAAAAAGTGAGGGACAAAAACCAACTTTTTTTCCAATTTTTTTTTCAGTTTTTCTTTCCATAAAAAAACACTTTTTTGTCAATTTTTTTACTAAAAACATAATTTTTTTAACTATTTCTATAATTTACTTAGACTACTAAAATTAATCAATTTAACTACTATCAATTGTCAAAAAAACCATCCCTCTAACAATAGTTTCAAAATTATTTATTCCAAAAAAATAAATTATTAAATTAATATCACACTCAATAATTAAATAATTTAAAATTTACTATTTACTATTATCTCTCTATTAAAACTACCAAAATCAATCAATTTTTCATGTAATAAATAAAATCAATCAATTTAACCACTAACAATTGTAATATTAAATCATATAGAAAAAAAGAGAAAACATGTGGCAACGGGAGCGGCAACGAGAGTCTGACAATGAGATCGGCAACGGGAGTGCCAACAAGAGAGGGAACGAGAGCGCCAGCGAGAGTGCCAACAAGAGAGGGAACGAGAGCGACGTGGCTGCATATTTTACCTTTTACTCCATTATTAATATTATAAGAAGATACCGATTTTGTTTCTTCATTTTTACTCCGTCTAAAATTTATTATTTACTATTATCTCTTTATTAAAACTATTAAAATCAATCAATTTAACCACTGAAAATTATAAAAATACAACTTTAGCCACTACCAAACATTACAAAATAATTTACTTATAATTAAACGAATATGATTTAATTAATATTAAATCATATAGAATAATATGAGTTAACATGTGGCAACGGGAGCGACAACGAGAGACTGGCAATGGGTGCTGCAACGGGAGTGGCAACGAGAAAGGTAACAAGAGCGCCAACGGGAGTGCCAACGGGCAGTGACGGATCCAGAAATTTTCACTAGTGGGGACAAAAAAATATATAGCCTATAAAATTTTCTTAAAAAATTTATTAAACTTTCCAAAGAACATAATTTCATTACAAAGAAACATTAAAATACCTAAATTTCTATAAATACATAGCTAAAAAGACAAAATTAGTACCAATTTATTTTCTTTTTTATTTATGTCTTGTGAATTTCTACATTTAATTTATCTTATGGGGGCAACCTTTATTTTTTTATGGGGGCAAAATAAATTTGTTATATATATTCCCAACCAAAATAATTTTTCAAGTGGGGGCAAATGCCCCCAATTAACAACAAGTGGATCCGTCCCTGCCAACGGGAAGGTCAACGAGTATGCAAACGAGAGTGTCAACGGGGATGCATATTTTACCTCTAATGTCCAAATACATTATTATAGATCAATGTAATTCTGATTGTCAATCTCCTTTATTTTCTTCGACTCAATATAATTTTCATTTGTATGTTATATGACATAATACCTATCTCTTTACACTTTGCATTTCAAATCATACATTTTGGACATTGTTCACAACTTATGATTATCTTCCAAATTACTATTATGACTTCATGGCAATACACCGACCATACAATATCACCTGTGCGTATGCACAGGTAAAATACTAGTACAAGAATTAAAGGAAAAACTATGTATATTGTAGGGTAAAAAAACTAAAAATTATATATATATATATATATATATATATATATATATATATATATACACACACAGAAAAAGATAACTTCCATATTCGTAAAGATGAAAAATATAGATTGTCAAAAAAAAAAGATGAAAAATATATTATAGCTTTATTTAATTGTTATACAATTGTGGTGCGTATTTATTTTTTAATAATTTGTATTAAAAAGAATTAAGTGAAAAGAAAATACGTGAAAGTTTTTTTTTTTTTGTCAAAAAAATACGTGAAAGTTAAGTGACAGATCCAGCACTAAAAAGCTGCCTCATTCTCAATTTTAGATCAAAACACTCTGTCGTTTTGCTCCCGCTGGCCGCTTGTCCACAACCCGGGGACCATCGCCACCTCGCTTAGCGACCAACCTTCCACGCGCCTACCAAGCACGTGCCTTGTCCCCTCTTCGAAAATATCTACGTGACGTGTACAAAGCGATGCCACGTAGACTCCATCCCACAATCCTCGCTCAAATACCTCTCCCCGTCCGATGTTCGCCACGTACCCCTAATTTACTGTTCACACACCCCCTTTATATATTCAGCGCCCCCCTCCTGAAAAAGAAAAAGACCCTCTTTCAGAGTCACAGCACACCTCTTCTCTCTCTCTCTCTCCACAAACTCTCACAGAGTGAGAGTCTCACTGTCACGGACAGAAAAGAAGTTCAGACACTCACTCACGTTAAAACTTTCAGAAAATACAAAAGGCAAAAGCTGAGACTGTGAGTGGTGGTTGTCTTGTTCTTTTTTCTTAATGGG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00447.20	HSF_DNA-bind	10	99	7.90E-30

Gene family

Gene family	Subfamily
Transcription Factors Family	HSF

Gene Ontology

GO term	Description	Category
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function

InterPro

InterPro term	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR027725	Heat shock transcription factor family
IPR000232	Heat shock factor (HSF)-type, DNA-binding

trEMBL

trEMBL term	Description
A0A1S2Z0S8	_

SwissProt

SwissProt term	Description
HSFC1_ARATH	Heat stress transcription factor C-1

KEGG

KO	Description	Enzyme
K09419	heat shock transcription factor, other eukaryote

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G24520	heat shock transcription factor C1
Medicago sativa L.	MsG0680035659.01.T01	_
Oryza sativa L.	LOC_Os02g13800.1	HSF-type DNA-binding domain containing protein, expressed
Cucumis sativus L.	Csa021238	_
Glycyrrhiza uralensis Fisch.	Glyur000350s00020061.1	_
Codonopsis lanceolata	Cl_chr08_03650T	_
Arachis hypogaea L.	AH05G26500.1	Heat stress transcription factor C-1 like

Expression pattern