Gene detail

Detail information of Am07G015460.1 Annotation

Gene ID	Annotation
Am07G015460.1	CDK-activating kinase 1AT

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G015460.1	mRNA	Chr07	111463637	111465993	+

Sequences

CDS:

>Am07G015460.1
ATGGATCCTCCAACAAAGAGTTGGAGTATCCATACCCGATCCGAAATAACAGCCAAATACGAAGTTCTCGAACATATCGGCTCGGGTTCCTACGCTGACGTCTACCGTGGACGGCGACTTTCCGACGGAGATACGGTGGCACTGAAAGAAGTTCACGATCACCAATCAGCTTCTAGAGAGATCGAAGCTTTGAAAATTCTTCGGGGCTCCGAAAACGTCGTCGTCATGCACGAGTTCTTCTGGCGTGAAGATGAAGACGCCGTGCTTGTTCTTGAGTTTCTGAGGACTGACCTCGCCGCCATGATCCGAGAAGCAGCCGGCGACGGCGGCGGTCATGGTGGGGGGATGGGTATTGCTGTTGGGGAAGTTAAGAGGTGGATGATGCAGGCTCTTAATGCGGTTCATGTGTGCCATCGGAATAAGATCGTGCATAGAGATTTGAAGCCTGGAAATTTGTTGATTTCTGATGATGGGGTTCTCAAGTTAGCAGATTTTGGACAGGCAAGGATACTTGTGGAGCCTGGATTTGATGCTTCAAATCGCGAAAGTTCACCTCAACTTTCTGATTCTACTCCCTTTTCAGATTCAGACAACACAAACCAAACTGGATTTGAAAATCTAGAGGAAGGAACAATGAATCATGATGAGTATTTTAGAGTATTGGATGAGCTAAAAATTAAGAGCCATGCATATGACACTGATAAAGACACAAACACACATGATGGTAATAACTCATGTCTTGCAACATGCACAACAAGTGATATAGATGATGATCCTTGGAAAGGTTCTTTTACATATGAAGCAGCTGAAGAGGATGGTGGCAATGAACTTGGTCCTCTCACATCATGTGTTGGAACTCTATGGTTCCGAGCACCGGAATTGCTTTACGGATCGACAAACTATGGTATGGAGATTGATCTTTGGTCACTGGGGTGTATCTTTGCTGAGCTATTAGCATTGAAGCCATTGTTTCCTGGAACAGCTGATATAGATCAAATTAGTAGAATCATTAGTGTTTTGGGTAACCTTAATGAGGAAGCTTGGCTTGGTTGTTCTAACCTTCCTGATTATGCAATAATTTCTTTTACTAAGGTGGATAAACCTACTGGTCTTGAAGCTTGTATGCCCAATTGCTCGGATGATGAAGTTTCTTTAGTTAAAAGATTGGTTTGTTATGATCCAGCTAAGAGAGCCACTGCAATGGAGTTGCTTCATGACAAGTACTTCGGTGAAGAACCTCTTCCTGTTTCGGTTTCTCAGCTATGGGTTCCTTTTGGAAATGGACAAAGTGGCGGGGATTCCCTTGGTGAGTTTCGTGGTAAAAATGAAATGGGTTCTGAATTTTGA

Protein:

Promoter(3k):

>AM07G015460.1
TTAATAGCATTAGGATTAGGATATTCATGTGATATGCCATGTGTGATTTTTATTTAATGATTTTTCCATAAAACACTCTCCTTGAGCCACATCAGATTTTTGGCTTTGAAGAGCTAGCTACTTTGTATTATTAATAGATAGATTGGCCTATTTTTACAATAAACACCTCCAAAAATAGAATATCGCAATATTTGCTCTCAAAGGGGATGCGGCACTCTATTTTTACAATAAACACCTCCGGTCGAGGAATGCTGATCCAAATGAACCAGTTATGACATTTGTATGACAATCCCTTTTTTCGATGATTTGTATGTACAATTTATATGTTAACATAATAACTACGTATTCAATTTGTAAATATCTAAACCATATGTCTTGGACGGAAATTACAAACAAACATATTTTTTAAGGTCGATTGCATTAACAAGCATACAATGCATGATCAGAATGTATTCGTTGTTCATGGTATATGCATGTAGAGCTGTCAATTTGGCCCACGTGGGCCAGCCCACCCTAGGCCCACATGGCCCATGGGCCAAAAAGCCCATCATCCTAAGGCCCCACATAGGCCCCAAGCCCATAAGGCCCATGTGGGCCCAGCCCCACCCATAGGCCCTGAATATTTATTTTGCAAAAAATGACCCACTCAACTTTGATGGCCTAGTTTAGCCCATGGGCACTGAATATTTATTTTGCAAATAATGACCCACTCTTGGTGGTGGTGGTGGTGGTGGTGAGTGTGAGATAGTGATGATGGTGGTTGTGGTGAGAGGGAGAAGGAGGTGGTGGTGAGTGAGGGAGAAGAGGAAGGGGGTGAAAGAATGAAAGTGGATGTGTAAATAGTGGAAAAATAGGTGGTGGTGGTGGTGGTGGTGGTTGGTGAGAGGAAAAAGGAGGTGGTGGTTGTTGTGTGATGATGGTGAGATGGAAAAGGAGGTGGTGGTGGTGGTGAGAGAGAAAAGAAGGTGGTGGTGAGTCGAAGATGGTGGTGGTGGTTGTGGTGAAAGGGAAAAGGAGGTTGTGGTGAGAGTGAAAGAGAAGAGGAAGAGGGTGAAAGAATGAAAGTAGATGTGTAAATAGTGGGAAAATAGGTGGTGGTGGTGGTGGTGGTAGTGAGAGGAAAATGAAGGTGATGGTGGTGAGAGGGAAAATGAGGTGGTGGTGGTGGTGGTGGGAGTGAGAGAGAAGAGGAAGTGGGTGAAAGAATGAAAGTAGAGGTATAAATAGTGGGAAAAGAAGTGGGGTGGTGGTGGCGAGAGGGATAAGGAGGTGGTGGTGGCGAGAGGGATAAGGAGGTGGTGGTGGTGGGAGGGAAAATGAGGTGGTGGTGGTGAGTGGGAGATGGTGGTGGTGGTTGTGGTGAGAGGGAGAAGAATGTGGTGGTAAGAGGGAGGGAGAAGAGGAATGGGGGTGAAAGAATGAAAGTAGAGATGTAAATAGTGGGAAAAAAATGAGAATTAAATTTGGGGGCCAGCCCACAAAGCCCTGGCCCCAACCCACTAAAAAATTTAAAAGTGTGGGCTGGGGCTAAAAAAAGCCCCATTAATAGGGGGCTTCATTTTTATGGGGCTTGATTGGGGGCCAATGGGGCTGGGCTTGGGAGCTTGGGCCAAATTGACACCTCTATATGCATGGATCAATCCATCGTTGACCATTTTCTTCTATACAAAATGAATGAGAAGGTAATCGGGCTATAATATTTTGAAAAAAAGGCATTTATTGATACGGAATTTTCAATATCAATAGGTGTATTGTTGTATCACATTAACCAATACTGATTTGAAAGTGTATACATTTTTTTTCGTTAAGACAGGCATATCTCTTTCCTATCCTCAAGCAACAGCTAGCTAATGCCATGGCAGTTTGTTTTTACCCCCCATTGTAACCCATAACTGACCAAAATACCCTTAAAAAATGTTAAAAACGAATTCATTTCTTATTCCATCATATTTCTGAAAATACTTCAAAAAGAGGTATTTTTGGAATTCCCTAAAATTAACCTTCCGAAAATACCGTAAAAAATGGTATTTCTGGAAGGCAGAAATATTGGTTTTTCGGAAATACCTCAAAAAGAGGTATTTTCGGAAGCCAAAATTCTGAAAATACCTCTTTTTGAGGTATTTCCAGAAAACCCATATTTCTGCATTCCCGAAATATGTGTATTTCCAAAAAATTTTAAAAAATATTTTTTTTTAACAAAAAATTAGGGTATTTTGAGGATTTATGGTAAAATTGGGTTACGGGGTCTAATGAGGGGGGCAAAAAAAAAGTACCCATTTGGATGAGCACAACAACATATACTTGGCAGTATTTTTTGGTACCCCCCATTATACCCTATACACCCCAAATTGACCAAACGGACCAAAATACCCCTAAGAAAATGTTAAAAAATGAATTCATTCCTCATTCCATCATATTTCCAGAATTTCCTGGAAATTAACCTTCCGAAAATACCGTAAAAAATGGTATTATGGCTTCCGAAAATACCTCTTTTTGAGGTATTTTCAGAAAACCCATATTTTTGCCTTCCAGAAATATGTGTATATCCAGAAATTTTTAAAAAATATTTTTTTAAACAAAAATTTAGGGATATTTTAGAGATTTACGGTAAAATGGGGGTATGGGTTCTATCGAAGGGGTAAAAAGAAAGTGCCCATATACTTTTGTTGCCAATATAGACGGAGCTGGCCCATGTTTTCATGACGTTAACATAGGATAAACACATATATATATATATATATATATATATATATATATATACTACATATCAACACCATTAAAATATGAATATAATTTGAAAAATAAAATAAAAAATAAAGAGAAATGACAAAATGTGACACTCATTAAGACATACTACAGTTGAAAACGAAAAGAGAAAACAAGCAAACGTTGCTGGTAGCTGCAATTTGCAAACCAGTTGCAGTCACAAAAAAAACTCAGAACTCAAAACCCTTTTTTCAATTTTATTAACATTTTTTTATATTCAAACAGTGAAAGTGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	20	174	1.80E-54
PF00069.28	Pkinase	280	409	1.80E-54
PF07714.20	PK_Tyr_Ser-Thr	22	171	4.30E-16

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.2:CMGC_CDK-CCRK

Gene Ontology

GO term	Description	Category
GO:0005524	ATP binding	Molecular Function
GO:0051726	regulation of cell cycle	Biological Process
GO:0051301	cell division	Biological Process
GO:0097472	cyclin-dependent protein kinase activity	Molecular Function
GO:0106310	protein serine kinase activity	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A8B8LNG1	_

SwissProt

SwissProt term	Description
CDKF1_ARATH	Cyclin-dependent kinase F-1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G28980	CDK-activating kinase 1AT
Medicago sativa L.	MsG0680035697.01.T01	_
Oryza sativa L.	LOC_Os06g22820.1	cyclin-dependent kinase F-1, putative, expressed
Cucumis sativus L.	Csa006577	_
Glycyrrhiza uralensis Fisch.	Glyur000357s00018131.1	_
Codonopsis lanceolata	Cl_chr05_05290T	_
Arachis hypogaea L.	AH02G02200.1	Cyclin-dependent kinase F-1 like

Expression pattern