Gene detail

Detail information of Am07G014080.1 Annotation

Gene ID	Annotation
Am07G014080.1	isocitrate dehydrogenase V

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G014080.1	mRNA	Chr07	106747237	106751363	-

Sequences

CDS:

>Am07G014080.1
ATGGCTTCTCAGTTCTTAAGACGAACACTTGGAAGCCGTTACCTTGTCAATTCTAGAGCCTTCTCTTCCGCTTCCACTCCGATCCGTGCTACTCTTTTTCCCGGTGATGGTATTGGTCCTGAAATCGCTGAGTCCGTCAAACAGATATTTCAAGCTGCTGAAGTGCCAATAGAATGGGAAGAGCATTATGTGGGGACTGAAATTGACCCTAGAACACAGAGCTTTCTGACATGGGAAAGTTTAGAATCAGTGAGGCGAAATAGGGTTGGTTTGAAAGGGCCAATGGCTACCCCTATTGGAAAAGGGCATCGTTCATTAAACCTTACCTTAAGAAAGGAACTCAATTTATATGCCAATGTTCGACCTTGCTACAGCCTTCCTGGCTATAAAACTCGATATGATAACGTGGATCTCATCACAATTCGTGAAAATACCGAAGGCGAGTACAGCGGACTTGAGCATCAGGTTGTGAGGGGTGTTGTAGAAAGTCTCAAAATCATTACACGTCATGCAAGTTTAAGGGTGGCTGAGTATGCTTTCCATTATGCCAAGGCACATGGAAGAGAGAGGGTGTCTGCTATTCACAAAGCCAATATTATGCAAAAGACCGATGGTCTTTTCCTCAAGTGTTGCCGAGAGGTTGCAGAGAAATATCCAGAGATAACGTACGAAGAAGTTGTCATTGACAATTGCTGCATGATGCTTGTGAAGAATCCTGCACTTTTTGATGTATTGGTGATGCCTAACCTTTATGGTGATATAATCAGTGACCTTTGTGCTGGCTTGATCGGGGGATTGGGCTTGACACCAAGCTGCAACATTGGTGAGGGAGGTATTGCTCTTGCTGAGGCTGTACATGGTTCAGCACCCGATATCGCTGGAAAGAATTTGGCTAATCCAACTGCTTTGCTGCTGAGTGGTGTTACAATGTTGCGCCATTTGGATCTCCACGACAAAGCAGATCGGATTCAAAGTGCCATCCTCAACACAATTGCAGAAGGGAAGTACCGAACTGCTGATCTTGGTGGCAACTCAAAGACAACTGAATTTACAAAAGCAATTATTGATCATCTTTAA

Protein:

Promoter(3k):

>AM07G014080.1
GCAACCAGACATAAAACTCACACGATTTTCAGCTGAAATTCTGCAGTTTGCAACTGCCCCCATAACGTGGCAAGTTTTTTACGCCTTAACAACTGCATCACAACTACAATGATGCCCGTAATTTCAGGCATGTAATGGTTTTTGAGGCCTCTACAACTAGACACAAAACTCGCGGGATTTTCAGCCGAAACATCTACTCAATTTTTTTTGAAGATTAAATCTGCTCAATTTTGATAACCATCATCATTGCAATCTGCAACCGCGATTTTCCCTGCAAGGTAGCAGTTTTCAGGCCTTGGCAACTGCATCACAACAGCAATGAAGGTTGCCTTGAATACAATTTCACGCATGTAACAATTTTTGAGGTCTCTACAACAACAACATAAAAAGTTGATAACAATTTTCGAGGTCTCTACAACTACAACATAAAAAGTTGAGAAGGATTCAACAGTCACTGTTATATTAATGTAACTTTACCATTAAAGGACGAGGAGTTAAACAAAGGCGAAACTCATGCATAGTCCACCTAGTCTTCTCAAAATGGTCTTTGGATACCTATTAGATTCATTTTGAAGGCTTGCTTGGGATGGAAAAGTAGCAGATGTTCTTGGGTACCTTATGATTCCTTGAAAATATGTTCCCGAAAAGAATTCTGCAATTGAGTTTGAAAATTCTCGTGGTTTCATTTGTGTGAAAGCTATTTATTCTCTTATAGTTCTATATTTTTTCTAAAGACTTCCTTGAAGTAAACTTTAAATTAAGAACATTTTTGAGAACAAGTTATTCAAATAACCACTACGGAGATATACTCTCATTTAGTAGCGAATCCCGAAAACTAAGTAAAACAGCTAAGAGTATACTGTATACCCATCCAGCGCAAATCCATAAATCAACATCCCTTTCTTAACCAAATAAGCAGTACTTAACTTATCAGCTCTCAGAAAAACATAAATCAAAGCATTGTAAGTAATGGGAGAGATTGGATCCTTAACATATGGGTATCAATTTGGGGATTCATGTTTGGGTTGCTGGGTATGCAAGCAGGGGGTCTCAGGTTTAAACGGGGGCCCACTAGCATTTTCCCTCCCCCACTAACATTCGCCTATCAAAAAAAAGCTTTAGCCCTAATATTTTTTTAATAGAAAAATAAATGAAAAAAATAAATCGAATTTGGAAACTGTGTAACGGTGTTAACATTTTGAAACTTAAAGGATTGGATTGGGAAAAAATATAAAGGGCTTGAAATTTGAAATTATGTTAAAGGACCTCGGGAGCAATTTTGCATATTTATGATTTTTGTCCATCCTCCCTACAGACTAGGAATGAATGATGGTTGTCAATATGTTCTTTGGTGACTCTTACACATTTCCTCTGTTTCACAATACACGACGTTTTAAGGATTATCTTTTTCCTAAAATATCTTAATTATTTATTGTTTCATTCTACATATTTCCCTAATTCTCTACGTGCAATATATAATTAAGGGTACTATTAACAAAATAATATTTAATATTGCATTGGACTTTAAAAACGAAATGTAAAATGAAACAAAATTATTCTTAAAATACAACTTGGATTGTGAAATGAAAATAGTAGCTCATTAACAATGAGGTTATTCTTTAAATCTCAACTAATCATGTCTTATTTCTACATTAGTAATTGACTGATAGATACTAATATGATTTAGTTAATTTTATGATTTGTATGCTATTTATAATTTCTGATCCCTATTTAATAAAAGGTTAAACGATACATGCATGTATTAAAAAGCTTCATTCATGCTTGATCTTTTAAGAACTTAAACATATAGAGAAGAAACAAAGAATCAAAAAGATGATATTTAAAGTGGAATATCTTTTTCCATATAAATGAATTTATAAATATTTGTTTTAAAGTGGAGAAGAAAATAGGGCAAATATAAGTCAAGTACAAAGGAGTAATTTGGCCTAAAATTGAAAATATTAAGAACTTACGTGGGTATTTTAAAATCTCATTCACTAATATTACTATATAAACGACCTTAACGCTCACATCATCATCCTAACGTGACACATAAGCACTCAAACAAAACTTAGTCTCAATAGAAATTGATAGAGGGACCCACTAACGTGTCCCCCCTTTGTAATTGTAATTTAACAATGAGGTTATTCTTTAAATCTCAACTAATCATGTCTTATTTCTACATTAGTAATTGACTGATAGATACTAATATGATTTAGTTAATTTTATGATTTGTATGCTATTTATAATTTCTGATCCCTATTTAATAAAAGGTTAAACGATACATGCATGTATTAAAAAGCTTCATTCATGCTTGATCTTTTAAGAACTTTAACACATAGAGAAGAAACAAAGAATCAAAAAGATGATATTTAAAGTGGAATATCTTTTTCCATATAAATGAATTTATAAATATTTGTTTTAAAGTGGAGAAGAAAATAGGGCAAATATAAGTCAAGTACAAAGGAGTAATTTGGCCTAAAATTGAAAATATTAAGAACTTACGTGAGTATTTTAAAATCTCATTCACTAATATTACTACATAAACGACCTTAACGCTCACATCATCATCCTAACGTGACACATAAGCACTCAAACAAAACTTAGTCTCAATAGAAATTGATAGAGGGACCCACTAACGTGTCCCCCGTTTGTAATTGTCATTAAGTTTGATTTGATATTAATTATTCTCGGAACCAAATTAAGCACCAAATTTTCTGTGAGAGACGCAATTGAGAATTGACTCTACAAATAATGGAGGTGTATTTAATAAAACCCATATGAAAAACACGCCTCTGGTCCGTATCACAAACCCAACCTTCAATTTCTGAACACTTCACCAATCGATTGCTTCTTTGTGACGCTGATTCTTCTCTCCGATTCTCATTTCCAGCAAATTCGCTACATGTTTTCTCAGATCTGTGGAAAGATATCAATTTCATTGACCATACACGCATTTCCAGTTAGAAATTGAATCAAAGTGCAAGACCGATCATTAGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00180.23	Iso_dh	31	354	5.60E-106

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005739	mitochondrion	Cellular Component
GO:0006102	isocitrate metabolic process	Biological Process
GO:0051287	NAD binding	Molecular Function
GO:0000287	magnesium ion binding	Molecular Function
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR024084	Isopropylmalate dehydrogenase-like domain
IPR019818	Isocitrate/isopropylmalate dehydrogenase, conserved site
IPR004434	Isocitrate dehydrogenase NAD-dependent

trEMBL

trEMBL term	Description
A0A1S2Y9P7	_

SwissProt

SwissProt term	Description
IDH5_ARATH	Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial

KEGG

KO	Description	Enzyme
K00030	isocitrate dehydrogenase (NAD+)	[EC: 1.1.1.41]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G03290	isocitrate dehydrogenase V
Medicago sativa L.	MsG0180003541.01.T01	_
Oryza sativa L.	LOC_Os01g16900.2	dehydrogenase, putative, expressed
Cucumis sativus L.	Csa011943	_
Glycyrrhiza uralensis Fisch.	Glyur000327s00026460.1	_
Codonopsis lanceolata	Cl_chr05_28000T	_
Arachis hypogaea L.	AH19G05360.1	Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial like

Expression pattern