Gene detail

Detail information of Am07G013590.1 Annotation

Gene ID	Annotation
Am07G013590.1	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G013590.1	mRNA	Chr07	104786200	104792563	+

Sequences

CDS:

>Am07G013590.1
ATGAAAACTCATTCTCAACCTGACGGTGGCGCCTCCTCCACCTCCACTGCACCATCCAATCCCTCCGACGAGAAGAACATAAACCCAGAGCTATGGCAAGCATGTGCAGGTCCATTGGTGAATCTTCCTCCAGCAGGTAGCCACGTCATCTACTTCCCTCAAGGTCATAGTGAACAAGTTGCCGCTTCTTTGAAGAAAGATGTTGATGCTCAAATCCCTAACTACCCTAATCTTCCTTCTAAGTTACTTTGTCTCCTTCAAAGTCTCACCTTGCATGCTGATCCAGAAACAGATGAAGTTTATGCACAGATGACACTTCAACCTGTTCCTTCGTTTGATAAGGATACTTTAGTGAGATCAGATCTTGCTCTTAAGTCAAATAAGCCACAACCTGAGTTTTTCTGTAAACAACTCACTGCAAGTGATACAAGTACTCATGGTGGTTTCTCTGTTCCTCGTCGCGCAGCTGAGAAGATTTTTCCCTCTCTTGATTATTCTTTGCAACCTCCTGCTCAAGAACTTGTAGCCAGGGACTTGCATGATACTGTTTGGACATTCCGCCATATATACCGTGGGCAACCCAAACGCCATTTGCTTACAACTGGATGGAGTCTATTTGTCAGTGGAAAGAAGCTTTTTGCTGGTGATTCTGTTTTGTTTATAAGAGATGAAAAACAGCAACTTCTTTTGGGAATCAGACGAGCGAACAGGCAACCGACCAATGTATCATCGTCAGTACTATCAAGTGATAGTATGCACATCGGAATCCTTGCTGCGGCAGCTCATGCTGTGGCAAACAATAGTTCCTTCACTGTCTATTATAATCCCAGGGCTAGTCCCTCGGAATTTGTTATTCCTTTAGCCAAGTACTACAAGGCAGTGTACAGCCACCAAATATCACCTGGCATGCGGTTCCGAATGATGTTTGAAACTGAAGATTCAGGAACAAGAAGATACATGGGTACAATTACAGGCATCACTGATCTGGATCCTGTGAGATGGAAAAATTCTCAATGGCGTAATTTACAGGTTGGTTGGGACGAGTCAACTGCTGGGGAAAAACGAAGCAGGGTCTCAATCTGGGAAATTGAACCGGTGACTGCTCCTTTTTTCATCTGTCCTTCTCCGTTCTTTAGATCCAAGAGGCCAAGACAGCCGGGAATGCCCGATGATGAATCTTCCGATTTTGATAACCTTTTTAAGCGAACAATGCCTTGGCTCGGTGATGACATGTGCATGAAAGATCCCCAAGGTCTCCCCGGCCTAAGCCTAGTTCAATGGATGAACATGCAACAAAATTCTGCTCTTTCTAGCTCATTGCAGCAAAATTATGTTCCTTCCTTGTCAGGATCTGTTTTGCAAAATCTTCCCGGTGCAGATATTTCCCGTCAGTTAGGATTTTCTTCTCCACAAATTTCTCAACCGCAGAATGCATCTTTCAATGCTCAAAGGCTACTTCAAACTGCAAAACAACTCGATCACCTTCAGAAACTACCGTCCTCTTCTAGCACGATGGCAACTGTCCTCCAGCCACAACAACAGTCGAGCGATATCGCACAACATAGGCAGAACATGGTAAATCAAACTCTTTCTCAGAATCAAGTTCAGGCTCAATTCTTGCATTCCCAGAATCTTGTCCAAACCAACAATATTCTTCAACAACAGCAGCAAGTGCAACCATCTATCCAAAGCCATCAACTCCATAGAAGCCTCTCTCAGAACCCGCAACAACAACAACAACAACAACAACAACAACAGCAGCAGCAGCAGCAGCAGACAATTATGTGTCAAAATCAACAACAAAGTTTTAACCAAACCGCTATGTCTGATCATCATCAACAACTACAGATGTCGGATAATCAAATTCAGTTTCAATTATTACAGAAGCTTCAACAGCAAAAGCAAATGCTCTTGGCACAACAATCTTCACTACAACATCAGCATCCTTCTCAACTTACTCAAATTCAGGATCAGCAGAGGCAGATTTTAGATAAAGCACAAAATTTATCTCGAGCACTAATGCCTAGTCAAGCGCTCGAGGTCCTTCCAGCAAATCAAAACTCACTTCCTGAGGTCAATTCTATCGCACATCAGATGACAAATGCTAATAGTCGAAACAATATTGAATTTTCTCATCTGCCTCAACAGCCAAAGCTTCAACAGCAGCAATCAAACTTGCTATCTGAGATGTCTGGCCACATCGGCAACAGTATGCTAAACGGAGTAGCGATTGCGGGGCAATCTGTAGTTACTGATGAGGTTCCGTCATGTTCCACCTCGCCTTCTACAAATAACTGTGCAAATGGCCATACACTTGCACCACTAATGAATTCTCAATTCCATAGGAGCACGATATTAGGGGATGATGTGGCTCAGTCTGCTGCTAGAATCTTGAGTTCAAATGCCTTGGAAACCATGTCATCAAATGCAAACTTGTTAAAAGACTCGCATTCAAAACCTGAAGTTAAGCCTTCTATTAACATTTCCAAAAATCAGAATCAAGGAAATTTTGGTCCTCAGACATACTTAAATGGCGGTGCTGCATACACTGATTATTTGGATACATCGTCTTCTACAACATCGGTTTGTATATCTCAGAGTGATGCTCATATGCATCAGAATAACAATCCATTATCTTACAATCCACCGTCTATGTTGTTTAGAGACAATTCTCAAGATAGGGAAGCACAGGTAGATGTTAGGAGCAATATTCCATATTGCAGTAACATTGATAGCCAAATGGGAATGCCACTGAATCCAGATTCCATTTTAACCAAAGGCGGCACCTCGGGGCTTGTGAAGGATTTGTCTAATAATTTCTCTTCAGGAAGTATGCTTGGTAACTTTGAAAATAATAGAGATGCTCAGCAGGAACTTTCTTCTTCAATAGTTTCGCAGACATTTGAAGTCCCTGATATGACCTTTAATTCAATTGATTCCACAATAGATGATAGTAGCTTCCTGAATAGGGATCCATGGGCTGCACCACCACCGCCCGTGCTGCCACCAGCTCAATTTCAACGGATGAGGACGTATACTAAGGTATATAAACGGGGAGCCGTGGGAAGGTCCATAGACATAACACGGTATTCTGGTTATGAGGAGCTCAAACAGGATCTGGCTCGTAGGTTTGGCATCGAAGGACAATTGGAGGATCGGCAAAGGATAGGTTGGAAACTTGTCTACGTAGATCATGAGAATGATGTTCTACTAGTCGGAGATGACCCTTGGGAGGAGTTCGTTAATTGCGTTCGATGTATCAAAATACTTTCACCTCAAGAAGTGCAACAAATGAGCTTGGATGGAGATTTTGGAAACGGCGGTCTCACAAATCAAGCTTGCAGCAGCTCCGACGGTGGAAATACTTAA

Protein:

>Am07G013590.1
MKTHSQPDGGASSTSTAPSNPSDEKNINPELWQACAGPLVNLPPAGSHVIYFPQGHSEQVAASLKKDVDAQIPNYPNLPSKLLCLLQSLTLHADPETDEVYAQMTLQPVPSFDKDTLVRSDLALKSNKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPSLDYSLQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSGKKLFAGDSVLFIRDEKQQLLLGIRRANRQPTNVSSSVLSSDSMHIGILAAAAHAVANNSSFTVYYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPSPFFRSKRPRQPGMPDDESSDFDNLFKRTMPWLGDDMCMKDPQGLPGLSLVQWMNMQQNSALSSSLQQNYVPSLSGSVLQNLPGADISRQLGFSSPQISQPQNASFNAQRLLQTAKQLDHLQKLPSSSSTMATVLQPQQQSSDIAQHRQNMVNQTLSQNQVQAQFLHSQNLVQTNNILQQQQQVQPSIQSHQLHRSLSQNPQQQQQQQQQQQQQQQQQTIMCQNQQQSFNQTAMSDHHQQLQMSDNQIQFQLLQKLQQQKQMLLAQQSSLQHQHPSQLTQIQDQQRQILDKAQNLSRALMPSQALEVLPANQNSLPEVNSIAHQMTNANSRNNIEFSHLPQQPKLQQQQSNLLSEMSGHIGNSMLNGVAIAGQSVVTDEVPSCSTSPSTNNCANGHTLAPLMNSQFHRSTILGDDVAQSAARILSSNALETMSSNANLLKDSHSKPEVKPSINISKNQNQGNFGPQTYLNGGAAYTDYLDTSSSTTSVCISQSDAHMHQNNNPLSYNPPSMLFRDNSQDREAQVDVRSNIPYCSNIDSQMGMPLNPDSILTKGGTSGLVKDLSNNFSSGSMLGNFENNRDAQQELSSSIVSQTFEVPDMTFNSIDSTIDDSSFLNRDPWAAPPPPVLPPAQFQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGGLTNQACSSSDGGNT*

Promoter(3k):

>AM07G013590.1
CTTTTGTTTTTTTGTTCTGTTAAGTGACAGGGATTTTTTGTGTGTTTAATTTGCTTTGTGGATGAATGGGATGTATTTGTGCCATTTTGTTTATATTGTTGCTGAACTGAATAGGAAAAAATGTTTGCTCAGATTTCCATTATTTAGGAAGCACATTGAACCAGATCCTTTTTAGTTCTGTTAAGTGACAGGTTTTTTTTTTTTGTGTGTTTTTTTTGAGTTTGATAATTTAGTATATATTGTTTTTGTTTGTTGTTCACAAAACAAAATTATAATGTAGACAAGTTTTATTTTTTGCTCATGTATACCAGCATTGGCATATTGTTTCTGTTTTTTATCCATGAGGTTTGGGGAGGACAATGGGAGGAACCATCTCTATTAGCAGAAGGTATGTGTATATTTAGCCAAAACAAAATAAAAAGGAAATACTTCATTCTTTTGGTCATTTTATTATCTGTGATTTTATTTGAATTTAATGTTGTCAAATGGTACAAAATTAGTGTTGATGAGTGCATGTGTGTTGATATCATTTGATTTGTTTTCTAACAAAGTTGATTACAGGGGTCTTGCTCCCATGTCTGACTTTTAAAATCCATGTGAATTATGCTTTGTACAGGTATTAAATCAGTATACGAGTGCAGCAGAGCAGCCATCCGTGCTCACGGTGGGGGTTTTAAGCTTGGCAGATTTTGAGCACAACTCCAATAACAAGGGTAAGATTCAATCCCTTTTTCCTTTATATTATTTACCAATTCTTTTATCTATACTCATAAATTCTTGCTCAATTTCCTCTAATCTAATTTTATTACTCAGTTTTTTTCTCTAATATATTTTACTGCTCAGTTTTTCTCTAATTTGATTATGTTATCCCCTTTTTAGCATGTTATGTGTTTCCCTCTTGCTTTGTGTTTGTAATTTTCTGCCTATTAATTTAACTCTTTTTTTGATTTTTTGTTTTCTCAGTTAAACTGATTTGCTTGCTGCTAAATGTCAATATATGATTAGTAGTACACTGATGTTGATTTCCTTAGGAAATCAAAATTAGTGTCTTTTGCACAATATTCCTCACAGATGCGCATGCTTTACTTTATGTTTCATGAACTTTGGTACTTCACTAAAATATGCATCATGTTATGTTTATGTTCATTTTCATTGCAGGTAAAAAGGCCTATTCTCTCACATGGGTTCTGCAGTATATCAATCTTTTCATGATAAATACCGGTTACATCATTTTGGCCGGTTCAGCCTTGAAAGTAAGCATTGCTGTTTGTGTTTAATTTTAGACTTATTCTGTTACTTTCACTTATAACATTGTGTTTCTTTCCATTTTATACTTAGCTTTTCCATTTGTATTAGTTGGTTTTGTATAATTTGGTCTCAGCTTACTCCACTTTGTTCTACAGGTGGAAGAAAGTTGCAGTGATTGGTTATCATAGTGTAAGCAACAAGTCTTTATTTTCATATTTGATTTGTTTCTTTTTATCTCATCTTTTTGCTAGCACCACAAACTCAGAGTACATTAACTCTTCTTCCACTAAGCAATACAAATGTATAATCTTTGGTGCCTTATTTTCAGCATTAATAACTTGAACACAAATGAGTGTTGTTGGAAGAACTAATGCATTTATTCTTCTGCAGAATGAACAAAAAGTCAAGTGACTCGGTAGGAGAATCTCAAGTGTGTGTCAGTTTCTCACTTTCATCCATTCACAAGTTAGTCATCTTAGAATGAGCACTGCATTCATTAAGTTACTAATTTTGGTAAACTTGGAAACTTCACCTAAGTTCTAAGTTCAGTATATAAAAAAACTATTATGTAAATGGACATTCTTCCTATTAACATTGAAAGGTCTTCCTGGAACAATGATTCTTGCTGATGTGCTTGCTGATTGTATTCAGGTATTGTTACTTATGTGGTTAAGTTTTTTTATGAAAAAATTAGAATGATAAGTTACTACTCTATCAAATGTTGCTGCTGAAAAGATAAGAGAAAAGATGTAGTAATCTGACTCAGACTACATCTTTTAGCAATCTGACTCACATAGAAATTAATTGTTTGATGAAATTATCAGTTAAATGGTTTGGATGAGGAGAGCAAAATACCTTAAGGTAGAAATTCCTCTTTTTTTATTCATTTGCTGCAATTTTTCATATTTATTTGCCTTAGTTTTCATTTTTTAGTGATTGTTCTATTCCTCAGGATCATATTTTGTGGCTGCTACTCAGAAAGAAAACATTCAGCACATGTTCTAAGGTGGCATTAGTATTGCAGTAATGATTGTCACGTGGTATTTGTTTGTCAGCTTATATTTTATGTATAATAAGAGATCATTCAGATACGAGTTTGGTTGGATTTAATTCCAAATTCCAAATTTGAAGTGTAAAGCAGTATTTGTTACTTCCTTTCTCAGTTTTTATTTGTTTTGTTGCATATGTTGTTTGTGTAGGTATTAGTTTCTGGTGAACCTTCAATTTGGGTATTTCTGTTGATTCCAGAAATTTAAAATTAAAGCCCAACTTTGCATTTTCATTAAGCTAATTTTAGTATTATAATGATTGTGCGGTTCCTAAAACTTTGGCCCTGTGCATCGCACGAGTCACGGCACTCGTAAGTAGTAAGTACCGTGGTAAACGGTGAAGAAGCGTGGGAATGCAAAGCAACAGCATAGATATATGTGGAGAGGTCAACTCAAATCAACTCAATAAGGCATCTCTGTCTCATCGTCTATTCCATTAGTCAGCTCATCTCAAAGCCTATTTGGTTAATTGGGATTGCAGACAGAAAAAAAAAGAAAGAGAAAAGAAACACAAACACAACACAACACAAACAACTGTGTCTCTCTCCGACCATTGTTTTTGCAAGAGTGGAAACATTAGGTCCATTACCATTTGGTCTCTGTCTCTCTCTCTTACCCACTTTCTGTCTTCCCTTTTTCCCTCCCTTCTTTCATCTCTCTTTCTCTCTCCATGAACTCATGACCCATTGTTGAAGAAAGAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF06507.16	Auxin_resp	260	343	4.30E-35
PF02362.24	B3	134	235	3.80E-20
PF02309.19	AUX_IAA	1009	1095	4.80E-07

Gene family

Gene family	Subfamily
Transcription Factors Family	B3
Transcription Factors Family	B3-ARF

Gene Ontology

GO term	Description	Category
GO:0009734	auxin-activated signaling pathway	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0003677	DNA binding	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR000270	PB1 domain
IPR015300	DNA-binding pseudobarrel domain superfamily
IPR003340	B3 DNA binding domain
IPR010525	Auxin response factor domain
IPR044835	Auxin response factor
IPR033389	AUX/IAA domain

trEMBL

trEMBL term	Description
A0AAN9KCS8	_

SwissProt

SwissProt term	Description
ARFE_ORYSJ	Auxin response factor 5

KEGG

KO	Description	Enzyme
K14486	auxin response factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G20730	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related
Medicago sativa L.	MsG0480023746.01.T01	_
Oryza sativa L.	LOC_Os02g04810.1	auxin response factor 5, putative, expressed
Cucumis sativus L.	Csa012237	_
Glycyrrhiza uralensis Fisch.	Glyur001170s00029947.1	_
Codonopsis lanceolata	Cl_chr08_23950T	_
Arachis hypogaea L.	AH15G30770.1	Auxin response factor 5 like

Expression pattern