Gene detail

Detail information of Am07G011400.1 Annotation

Gene ID	Annotation
Am07G011400.1	beta-galactosidase 7

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G011400.1	mRNA	Chr07	94219272	94221740	+

Sequences

CDS:

>Am07G011400.1
ATGGGTTCTCCATCTTGTGTTGGAATTATCTTATTAAGTCTAACTATTATATACTCATGTCTTGCCGTGGAGGTTACTTATGATGCTAACGCTCTCATTATTAATGGAGACAGGCGTCTTATTTTTTCTGGTGCAATCCATTATCCACGAAGCACTGTGGAGATGTGGCCTGACCTTGTTCAAAAGGCCAAGGATGGTGGCCTTGATGCCATTGAAACTTATATATTTTGGAATAGTCATGAACCTGTTCGGGGTGAATATAATTTCTCGGGAAATTTAGATTTTGTCAAATTTTTCAAGGTCATCCAAGAAGCTGGACTATATGGCATTTTAAGGATAGGTCCTTATGCTTGTGCAGAATGGAATTATGGAGGCTTCCCATTGTGGTTGCATAATATGCCTGGGATTGAGATGAGAACCGATAACCCGGTTTACAAGAAAGAAATGCAAATTTTCACCACAAAGATTGTGAGCTTGGCCAAAGAAGCAAAGTTGTTTGCGTCACAAGGAGGACCCATTATTCTCGCTCAAATTGAGAATGAATATGGAGACGTCATGTGGGGTTATGGAGATGCTGGGAAGGCATATGTCAAATGGTCTGCACAAATGGCTCTAGCACAAAACATCGGTGTTCCATGGATCATGTGTCAGCAGAAAGATGCTCCTCAGCCTATCATCAATACTTGCAATGGATATTATTGTAAAGATTTTACACCCAATAACCCAAAAAGTCCAAAAATGTTCACTGAAAATTGGATTGGTTGGTATCAAAAATGGGGCGAAAGGGCTCCCCATAGAAGTGCCGAAGATTCGGCTTACTCTGTTGCACGCTTTTTCCAAAATGGTGGAGTATTAAATAATTACTACATGTACCATGGTGGAACCAACTTTGGCCGCACAGCAGGAGGACCGTATATGACAACTTCTTATGACTACGATGCGGCGCTTGATGAGTATGGGAATTTGAATCAACCTAAATGGGGACATCTTAAGAGTCTTCATGAAGCAATAAAATTAGGTGAAAATATTCTTACTAATGGAACAAGGAATGACAAGGATCTTGGTAATGGAATCACACTAACAACATACACTAATGCTGCTGGAGCAAGATTTTGTTTCTTGAGCAATATCAACGACAAAAACGATGCAAATGTTGACCTACAAGGGGATGGAAAATATTTTGTGCCCGCCTGGTCTGTGACCATCCTTCAGGGTTGCAATAAAGAAACTTTTAATACTGCAAAGATTACCAGTCAAACCTCTGTGATGGTGAAACGTAGTGATGATGCTTCTACTAAGCTCACTTGGGCGTGGAAAGAGGAGCCAAAGAAAGACACCATGAATGGAAAGGGAAGCCTCACATCACATCAGCTTCTCGAGCAGAAGGAATTGACCTTGGATGCTAGCGACTACTTGTGGTATATGACTAGTGTCGATATCAATGACACTTCCATTTGGAGCAACGCAACTCTTCGTGTGAAGACTATGGGGCATACACTTCATGGATATGTTAACAAGAGGTATATAGGATACCAATTTAGCAAATGGGGAAGTAATTTCACATATGAAAAACAAGTTTCTCTAAAGAAGGGAACTAACATCATAACTTTGCTTAGTGCCACTGTTGGGCTTGCAAATTATGGCGTTGGGTATGATAAGATAAAAACAGGCATAGCAGGTGGTCCTATTCAATTGATCGGGAAGAATGATGTGACTATGGATTTGTCGGCCAACCTTTGGTCTTACAAGGTTGGTTTGAATGGTGAGAGAAAACGATTCTATAATTTGCAACCACATGTTGGTGTATCGTGGAAAACAAATTCATCGTATCCTGTTGGAAAACCCATGACTTGGTATAAGGCAAACTTCAAAGCCCCATCTGGCACAAACCCCGTGGTGGTGGACTTTCAAGGTTTGGGTAAAGGACATGCTTGGGTGAATGGACATAGTATAGGTCGTTATTGGCCTTCATATATTGCTCCCACGAATGGGTGCAGCGACACGTGTGACTACCGTGGAGATTATAAAACGGAAAAATGCAACACCAATTGTGGCGTTTCATCACAAAGATGGTACCACGTACCAAGGTCATTTTTGAATAATGACATGAACACATTGATTTTGTTTGAAGAAATAGGTGGAAATCCTCAAAATGTTTCTTTCCAAACTACTACAACGGGAATGATTTGCGCTAATGTATACGAAGGTGCACTGCTAGAACTATCTTGCCAAAGTGGACAAATAATCTCACAAATCCAATTTGCTAGCTTTGGAAACCCAAAAGGACAGTGTGGTTCCTTTGAGAAAGGATCTTGGGAGGCTACCGGTAGCCATTCTGTGGTCGAAGCAGCATGCGTAGGAAAAAATAGTTGTGGATTTACCGTGACAAGAGAAATGTTTGGTGTACCGGTTGGGTTAACAAGCACTACCAATGGTATACCTACATTAGCGGTACAAGCGACATGTTGA

Protein:

Promoter(3k):

>AM07G011400.1
TATTCTCAATTATGCAATTCAATACTATTGGAATTCATCTATATATGGCTTCTCAGACACCCATATCTTTGTGATTGTGAAGCTCTCTTGTTAGTTATTTCTTAACAGGGCAAACAAATGGAAATTCAAACCACAATACATATTTTATGGTGAAATTATAGCAAATTGGTTTGAGGCTGTGGTCCTACCTTGTGTACCTTTGAGCCATGAGCCCCCCCCCCCCCCCCCCCCCAACATGTGTTTCGTGCTACCACCTATTTTTTCTAAAGTACTTTTCTGAACAATAGTGGTTCGATTTTTAAGTAGTACATGCCTCTTTCTGCATGTAAACCCAAAGAAAGTTAAGTATAACCTTCCATGGTTAATTTGGGTCATATGATGAAACTGTTATGTCAATTAGCATGTCTTTAGGGGATTACTTGATAACAGAATATATTGGTATTGACAACCACTACCCATATTAACCATTGAGATCGATTTATAAACCATGTTGGAATCTATAAATAATACTTATATTCAGCTGATCAATTCTAAAATAAGAATTGGAAACATTTTCACACAAAGGTTAAAACACTAACATCAAACATTACATTAAAACTATTAAAATATCATTACATAGCTTCAAGCATTCCAACTACTAGGAGGTTAGCTCATGATGAGCATCACAAAAGAAATATGCACGAAAATGATATCTAAAGTCATGGTACTGAGATTACAAAGAAAAGAAAATAGCATAATAGATTACACTATTTAAGCTTTCACGTAGTGACAGTCCATGTGATGCTGCAACATTGCTGTCCAGAATTTCCACTTGATGATGAACACTAGCTTATAACGAAAATGGAGGGAAAATTATTTCTATCTTTCTCTCCTTTGAACGGGCATCAGTTTTGAATGAATGAGGAAGAAGGTTGTGTTTTTCTATTTATCCAAATATGTCAAAAAGGGTTGACAAGGTACTTCACCAAATATTTTCATCCTCACTCCAAAATAGACAAGTGTCCCAATAAAGTACATTGATTGGTGGCTGCTGCAGGAAAAGTCTGTACTACTCTACGCTAATGTGACATAATGCAAAAACTTCTTTTAGTGCGTCAGTGTTTTTTCTCTCATTTGTCGCAGAACACCAATGATATAGCATCTGGTGCTGCAGTATACTAAACAAACACATTAAACATGGGGCACCAAAGTGCCAAATGATCACAAATTAGTTCATAACCCTCTTTTACTCTAAACAACACATATTAACTAATTAAACAACAATATTACTTTAAAAATCACATTGGATTAGGTCTAGGAAGCATAAATAACTCTTATAAATTAGAGTTATCATACCAATGTATCATATGGTACCCAGATGTAGAATTTTTTGTGTGTGAAGAAAACAGAGAAGGTGAAGAAGGGAGAAAGAGGTGGTGGTGGTGGCGGCGGAGGAGGGATAGGGAGGTTCGACGCAAAGAAGGGAGAAGGAGATGGACCAAATGATGGTGGTGGTAGTGGTTAGAGGGAGAAGGAAGTGGCGGTGGTTTTGGTGAGAGGAAGAAGGAGGTCATAGTGAGTGAGAGAGAAGAGGAAGTGGAAGTGAAAGTGAAAGAGTGGGAGAGGGGGTATTTTGGGGTTTTAGAAAAATTGGGGAGTGGGGGGGAGTGTGAAAGGAATTGGCCCTTGTGTAGGCTGTTATTCTCGTGTGTCTGGGCTTCTTTTTTTTTGAGCCCATGCTTTTGGCTTGTTATCCCTTTGAGTAGGCCAAGAAACTAGAGTGTAGAGGATAAACTTGGTGTACATGTTTGGTACTACTAATTTATAACACTTTATTTTTGCAAATTTATAGTAGTTTTTGAGCTTATAGCTTATAACATTTCATTTTTCTCTTGTTTTTATTCTTATTATTACTTCAGTAAAATTCTTCATTATTCTCTATTAGATGAATATATTCTCTCTCATTTTTAAACATTAATTACAAATGTCCATTTATGTTATTTAAATTAAGCAATACCCAAAAAAATATAAGAAAGACTAATATTAATAAAGTATATATTTAATATTATCCAACAATTCCCCCATGAATTATATATTGCTACCAATATTTTCTTTTAAAATAATATTAAATTTATATTTATTTATCTGAGTAAATTTAATAATCTGATTAACACAAAATGTTTGTAACATACTTAAAACTCGGTTTAAATTGAAAAATGTCATGAATAATGAATTTTTATCAAAATAAATAAAATTCTAAAATAAAGTCATGTCATTGCGATATTCGGGTTGACTTTTTCTGCATATTCAGGTTGTCAGTCTCATATGTAAGACAACACTTAAACCTAAATTCGTAAACTATTCTGAACACCCATGTCTTATTCGTCTCTTCAATATTTATGACACCTATAGCTGCTAGAGTTAAACTCCAACCTTATTAATTCAAGTCTCACGTTGTGTTTGTAATTATTACACAAGCTCAAATGACAATGGATAAAAGAATAAGAGTTTGGTAACAAGATAACGATACCAACACGAGGTTGCTTCTATTTAGTTAGAAGAGTTAACGTGTGACATGTGATTAAGGGAATTCAAACAAATCATGGGTGGTTAAAAAATAGGGGAGGTAATAAAAGATACAATTTAAATAGTTAAGCCTCAATTAACAAATGACAAGTGTAGGTCCTATACTTTTGTTAGTTTCTTTCTTGCGATATAGTTTTTCCATTAATAGAATCAAAATATAAGAATTTAACTCGTATATGATCCTTCTCATGGACAACTAGATAGATAAGAATAAATGTCAACAAAGCTATGAGATATATTGTGTCCATATTTATCAAGTGATTATCCATTCATACATGCATTTTTTGTTATAACCAGCTCACAAAATTTAATCCACATGTGAAGAACCTAATTTAGCTATTGATGAGTTGTTTCAACCAAAAAGTGATCCTATATAAATCATGTGTCATGTTTCAATGCTTCAACAACAAATACTTCATATCATCCATTTTTATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01301.22	Glyco_hydro_35	32	336	6.40E-115
PF17834.4	GHD	344	416	7.60E-18
PF02140.21	Gal_Lectin	741	803	3.10E-11
PF02449.18	Glyco_hydro_42	53	199	7.00E-08

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH35

Gene Ontology

GO term	Description	Category
GO:0004364	glutathione transferase activity	Molecular Function
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0003723	RNA binding	Molecular Function
GO:0003677	DNA binding	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR019801	Glycoside hydrolase, family 35, conserved site
IPR001944	Glycoside hydrolase, family 35
IPR017853	Glycoside hydrolase superfamily
IPR031330	Glycoside hydrolase 35, catalytic domain
IPR008979	Galactose-binding-like domain superfamily
IPR043159	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily
IPR000922	D-galactoside/L-rhamnose binding SUEL lectin domain
IPR041392	Beta-galactosidase, beta-sandwich domain

trEMBL

trEMBL term	Description
A0A371H6X3	_

SwissProt

SwissProt term	Description
BGAL_BRAOL	Beta-galactosidase

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G20710	beta-galactosidase 7
Medicago sativa L.	MsG0580025287.01.T01	_
Oryza sativa L.	LOC_Os01g34920.1	beta-galactosidase precursor, putative, expressed
Cucumis sativus L.	Csa019074	_
Glycyrrhiza uralensis Fisch.	Glyur007364s00047495.1	_
Codonopsis lanceolata	Cl_chr06_09610T	_
Arachis hypogaea L.	AH06G12940.1	Beta-galactosidase like

Expression pattern