Detail information of Am07G010730.1 Annotation
Gene IDAnnotation
Am07G010730.1 Pentatricopeptide repeat (PPR) superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am07G010730.1mRNAChr078856645188568655+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13041.9PPR_2961412.00E-144
PF13041.9PPR_21281772.00E-144
PF13041.9PPR_21982332.00E-144
PF13041.9PPR_22352822.00E-144
PF13041.9PPR_22733152.00E-144
PF13041.9PPR_23063522.00E-144
PF13041.9PPR_23463872.00E-144
PF13041.9PPR_23734222.00E-144
PF13041.9PPR_24094572.00E-144
PF13041.9PPR_24474922.00E-144
PF13041.9PPR_24805262.00E-144
PF12854.10PPR_11591901.10E-130
PF12854.10PPR_11962271.10E-130
PF12854.10PPR_12312621.10E-130
PF12854.10PPR_12642881.10E-130
PF12854.10PPR_13003321.10E-130
PF12854.10PPR_13343661.10E-130
PF12854.10PPR_13714011.10E-130
PF12854.10PPR_14094351.10E-130
PF12854.10PPR_14394691.10E-130
PF12854.10PPR_14745071.10E-130
PF12854.10PPR_15095411.10E-130
PF01535.23PPR2362659.50E-100
PF01535.23PPR3423709.50E-100
PF01535.23PPR3764059.50E-100
PF01535.23PPR4114419.50E-100
PF01535.23PPR4474759.50E-100
PF01535.23PPR4825119.50E-100
PF13812.9PPR_31542092.10E-64
PF13812.9PPR_32232762.10E-64
PF13812.9PPR_32573132.10E-64
PF13812.9PPR_33273832.10E-64
PF13812.9PPR_33974532.10E-64
PF13812.9PPR_34675222.10E-64
PF17177.7PPR_long1452933.30E-32
PF17177.7PPR_long2514023.30E-32
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0031930mitochondria-nucleus signaling pathwayBiological Process
GO:0016567protein ubiquitinationBiological Process
GO:0004519endonuclease activityMolecular Function
GO:0016020membraneCellular Component
GO:0004842ubiquitin-protein transferase activityMolecular Function

InterPro
InterPro termDescription
IPR011990Tetratricopeptide-like helical domain superfamily
IPR002885Pentatricopeptide repeat

trEMBL
trEMBL termDescription
A0A1S2Z7D0 _

SwissProt
SwissProt termDescription
PPR39_ARATHPentatricopeptide repeat-containing protein At1g12775, mitochondrial

KEGG
KODescriptionEnzyme
K17710pentatricopeptide repeat domain-containing protein 1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G12775 Pentatricopeptide repeat (PPR) superfamily protein
Medicago sativa L.MsG0680033197.01.T01 _
Oryza sativa L.LOC_Os06g36910.1pentatricopeptide, putative, expressed
Cucumis sativus L.Csa019314 _
Glycyrrhiza uralensis Fisch.Glyur007805s00045744.1 _
Codonopsis lanceolataCl_chr02_26290T _
Arachis hypogaea L.AH05G28490.2Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial like

Expression pattern