| Gene ID | Annotation |
|---|---|
| Am07G010700.1 | rna processing factor 2 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am07G010700.1 | mRNA | Chr07 | 88365061 | 88367778 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 58 | 107 | 4.50E-156 |
| PF13041.9 | PPR_2 | 94 | 141 | 4.50E-156 |
| PF13041.9 | PPR_2 | 128 | 177 | 4.50E-156 |
| PF13041.9 | PPR_2 | 198 | 246 | 4.50E-156 |
| PF13041.9 | PPR_2 | 233 | 282 | 4.50E-156 |
| PF13041.9 | PPR_2 | 276 | 315 | 4.50E-156 |
| PF13041.9 | PPR_2 | 306 | 352 | 4.50E-156 |
| PF13041.9 | PPR_2 | 342 | 387 | 4.50E-156 |
| PF13041.9 | PPR_2 | 373 | 422 | 4.50E-156 |
| PF13041.9 | PPR_2 | 409 | 457 | 4.50E-156 |
| PF13041.9 | PPR_2 | 446 | 492 | 4.50E-156 |
| PF13041.9 | PPR_2 | 480 | 526 | 4.50E-156 |
| PF12854.10 | PPR_1 | 159 | 190 | 6.50E-134 |
| PF12854.10 | PPR_1 | 196 | 227 | 6.50E-134 |
| PF12854.10 | PPR_1 | 230 | 262 | 6.50E-134 |
| PF12854.10 | PPR_1 | 265 | 296 | 6.50E-134 |
| PF12854.10 | PPR_1 | 300 | 332 | 6.50E-134 |
| PF12854.10 | PPR_1 | 334 | 366 | 6.50E-134 |
| PF12854.10 | PPR_1 | 370 | 401 | 6.50E-134 |
| PF12854.10 | PPR_1 | 409 | 435 | 6.50E-134 |
| PF12854.10 | PPR_1 | 439 | 469 | 6.50E-134 |
| PF12854.10 | PPR_1 | 474 | 507 | 6.50E-134 |
| PF12854.10 | PPR_1 | 509 | 541 | 6.50E-134 |
| PF01535.23 | PPR | 201 | 230 | 1.10E-98 |
| PF01535.23 | PPR | 236 | 264 | 1.10E-98 |
| PF01535.23 | PPR | 271 | 301 | 1.10E-98 |
| PF01535.23 | PPR | 342 | 369 | 1.10E-98 |
| PF01535.23 | PPR | 376 | 405 | 1.10E-98 |
| PF01535.23 | PPR | 411 | 441 | 1.10E-98 |
| PF01535.23 | PPR | 447 | 475 | 1.10E-98 |
| PF01535.23 | PPR | 482 | 511 | 1.10E-98 |
| PF13812.9 | PPR_3 | 82 | 138 | 3.10E-68 |
| PF13812.9 | PPR_3 | 154 | 209 | 3.10E-68 |
| PF13812.9 | PPR_3 | 223 | 280 | 3.10E-68 |
| PF13812.9 | PPR_3 | 257 | 313 | 3.10E-68 |
| PF13812.9 | PPR_3 | 327 | 383 | 3.10E-68 |
| PF13812.9 | PPR_3 | 397 | 453 | 3.10E-68 |
| PF17177.7 | PPR_long | 146 | 285 | 4.80E-32 |
| PF17177.7 | PPR_long | 251 | 402 | 4.80E-32 |
| PF17177.7 | PPR_long | 352 | 471 | 4.80E-32 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0016567 | protein ubiquitination | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0004842 | ubiquitin-protein transferase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A072TFX1 | _ |
| SwissProt term | Description |
|---|---|
| PPR91_ARATH | Pentatricopeptide repeat-containing protein At1g62670, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| K17710 | pentatricopeptide repeat domain-containing protein 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G62670 | rna processing factor 2 |
| Medicago sativa L. | MsG0680033197.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g36910.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa019314 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur007805s00045744.1 | _ |
| Codonopsis lanceolata | Cl_chr05_43460T | _ |
| Arachis hypogaea L. | AH15G25550.2 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic like |