| Gene ID | Annotation |
|---|---|
| Am07G010280.1 | SLOW GROWTH 1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am07G010280.1 | mRNA | Chr07 | 86150415 | 86154817 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 95 | 143 | 2.30E-65 |
| PF13041.9 | PPR_2 | 198 | 240 | 2.30E-65 |
| PF13041.9 | PPR_2 | 297 | 325 | 2.30E-65 |
| PF13041.9 | PPR_2 | 329 | 375 | 2.30E-65 |
| PF13041.9 | PPR_2 | 429 | 477 | 2.30E-65 |
| PF01535.23 | PPR | 199 | 228 | 4.60E-61 |
| PF01535.23 | PPR | 300 | 327 | 4.60E-61 |
| PF01535.23 | PPR | 331 | 361 | 4.60E-61 |
| PF01535.23 | PPR | 432 | 462 | 4.60E-61 |
| PF12854.10 | PPR_1 | 298 | 325 | 1.40E-39 |
| PF20431.1 | E_motif | 547 | 609 | 6.20E-14 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009451 | RNA modification | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0043231 | intracellular membrane-bounded organelle | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0005886 | plasma membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046848 | E motif |
| trEMBL term | Description |
|---|---|
| G7K9H7 | _ |
| SwissProt term | Description |
|---|---|
| PP169_ARATH | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G22410 | SLOW GROWTH 1 |
| Medicago sativa L. | MsG0580024877.01.T01 | _ |
| Oryza sativa L. | LOC_Os09g38310.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa024473 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000087s00008583.1 | _ |
| Codonopsis lanceolata | Cl_chr06_28490T | _ |
| Arachis hypogaea L. | AH05G06070.1 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial like |