Gene detail

Detail information of Am07G009610.1 Annotation

Gene ID	Annotation
Am07G009610.1	SCARECROW-like 8

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G009610.1	mRNA	Chr07	80589154	80591676	-

Sequences

CDS:

>Am07G009610.1
ATGTCGTCGCCAGGTTTCACTGGCGTTGGTGGATCATCAGATTACTTCACCGGCAGATCCATCACAACGACAGGAAACCCTATCAACAACCTCACCACCAACCCTTCTTCCATCATCACCACCGCCAACAACAGCAACCACCACCTTCACCACCCTTCTCTCTACCGCACCCAACAACAACACCAACAACAACAACTCCCTCCAATCTTTCTAGATCCTTCTTCCCAGATCCCTCACCATAACCGTAATACACCTTCCTTCATCGGAAAACGTACCCTCGCTGAATTCCAAACCCAACAAAACCAAACCTTCAACAACAACAACATCAACAACGTTAATCTCAACAACAATAACGTTCTTTCAAACCTTTTGCTCCGTTCCGTTAAACCAAGAACAAACTTTCATCACACATCGTCACCGTTATCTTTCTCCGTCAATGAATTACAAAACAACCCTATGGGTATGAATATGGGTTTGGGTGGTGGTTACCAAACGCAGCGTTTAGGTGTACCTTTGTTACACCAACTTCGTCCTCAACAAAATTTTAATTTTCAATATAAAAGCTCAAATTCGGGTCAGATACTGAACCGGGTTCAAGACACTGAACCGGAAAAGAATATCATGGATCATAGGCTTCAAGAATTAGAGAAGCAGCTTCTAGAAGATAACGATGAAGGAGAAGAAGCCGATGCAGCTTCTGTTATTACAACAAGCGAGTGGTCAGAGACATATCAGAACCTAATTGGTTCGGATGGTGGTTCAGGTTCGGGTGGTGGTTCAGGTGCGGGTGGTGGTTCCGGTTCCGGTTTTCCAAACCAAAAACCTGCTTCTTCATCTCCTACTTCGTCTACCACGTCATCAACTTCTTCTTGTGCTGCTTCTCCTGCTTGTTCCAAACAAACCTTAATTGAAGCCGCATCTGCGATTGCTGAAGGTAAAAATGACGTTGCTTTGGAGATCCTTAGCCGTTTACCGGCAACTCCGATTCCGATGGGGAATTCCGATCAACGGCTAACCGATTGCATGGTTTCTGCTCTGAAATCGAGGATGAATCAGGTGGAAAATCCACCACCGGTTGCGGAACTTTTCTCAAGGGAACATTCCGAGTCGACTCAGTTACTTCTTGATAATTCGATTTGTTTTAAGGTTGGTTTCATGGCTGCGAATCTTGCGATTCTTGAAGCAGCATTTGAAGAGTACGGAAACGGAATCGGAAATGGTTTCTGTGTGGTGGATTTTGAAATTGGACAGGGGAAGCAGTACGTGAATCTTCTTCACGCGCTTACAACGCGTAAGGTTCCGTTACCGGTTGGTTATACGGTGAAGATCGCGGCGGTAGCAGAGAACGGTGGCGAGGAAAGAGTGAAAGCGGTGGGGGAGATGTTGAGTCGTCAAGCGGAAAGGTTGAGGATCGGATTCGAGTTTTGCGTTGTTTCATTAACTCAAAAACTCGCTGAGTTAACTCGCGAGTCATTGGGATGCAGCCCTGAGGAAACGGTTATGGTGAACTTTGCGTTTAAGCTGAATCGTATTCCTGATGAGAGCGTGTCAACAGAGAATCCACGTGACGAGCTTTTAAGGCGCGTGAAGAAACTTTCACCGCGCGTGGTTACGATTGTCGAGCAAGAGATGAATTGCAATACGGCGCCGTTTTTGGCTCGTGTTGCTGAGTCATGGTCGTATTATGGAGCTTTGTTTGACTCGGTTGAATCCGTGTTAGGAAGGGAGAACGCGGAACGAGTTAGAATTGAAGAAGGTCTGAGTCGGAAACTTTGTAACTCGGTGGCTTGTGAAGGAAGAGATCGCGTGGAACGGTGTGAAGTGTTTGGGAAATGGCGCGCGCGTATGAGTATGGCGGGGTTCATGTTGAAACCAATGAGTCAAAACGTGACTGAGTCAATAAAATCTCGACTCGCTTTGGGTAATAATAATAATAATAATAACCGAGTCAACTCGGGAATCAATGTTAAAGAAGAGAACGGTGGGATTTGCTTTGGATGGATGGGAAGAACACTCACCGTCGCTTCCGCTTGGCGTTAA

Protein:

Promoter(3k):

>AM07G009610.1
TTATAGCATTACGATTCGGAGGAATGTTCAATTAATCTGTGTTATCCAAAAAATCTCTCTCTCTCTATAGGAGTAGTGGCTATCTACTCCTATAAAGAGATTTTTGTTCTCCTCACGGTTGGTTGCCTTACTTTACAAATTGCAACTAACATGGTTGCAATTTGTAAAGTAAAAATCTCTTTGTTCTCCTCACTGTTGGTTGTTTTACCAATTTCAGTTGGATGTTTTAGCAATTTCAGTTGGATGTGGACGTCGGCTCTTGATTTCGAATTCGATGTGAGCAGTGATAGTGTGCACGCGTGATGTTTATTTGCCATTTAGTCTAAGTAGACAAAAAAACTAAGAAATTTGAGAGACAAGAATTACAATTTAACCTGACTAAGAAAAAGAGAAATACTTCTTAATACGACTACGAAATGTACGACCCCCATGTGATCGGTTAGCTTTCCTATTTTTTTCTCTCAACGTTTACTTTTATGCCACGTAATAATTCTTGCCATTCGTTTCGTACTTAATAGTATATATAGCTTTAAGAAAAATTTGCAGTTTTGGTTCATTGAATATCTAATGTAACAGGCTTATAAGTCAGATACATTAGTTATTCAATTAACGTAAAATTGTAATTTTTTTTTAATAATAACGACCAAAGTAGTAGATCAATGTAAAAATTAAATAAAGAAACCAAGTTTAACCAAAAAAAAAGTCAATGATATAAACCAAAAAATTGCAATACCAACAAATTGAAAATAGAAAACATTGTAAGTGATTGATTAACGCAATCTCCATCTTATCAAAGCACTTTAACCTTTTTTCTCTAACTTACATTACATTGATTTTAAGAATCACAAGAACAACGAAACTAGACCAAACACGTACTTTATCGGTTTCATCACGCGCTTGGAAGGTAGCGTGATTCTTTGGTTCACTTCTTGGATTGCCGAAAATTGAAGTTCGTTATTATTATTTTTTTGGAACAAAGAAGTTCGTTATTAAATACCAAATGAGGAGTCGTTTCGGCTATAATGATGCCATACGGTTATCACCGTTCGATTTTCATGAATCTGGTCGAAATCTCGATTCCCATACAAATGAACGGTGAGATTTCAATGCGTACAAACTCTGATACGAAACATTCCACTCACTCTCATATTTTAAAACCGAAATAAAAAAACACATTAAAAATGACCATGACAATTGTATTGAAAATAATAAAATTTCAGTTGCGTTTTTGTGATTTTTTTTACAGGAAATTTCGTTTTTAATTTAAAATAAAACTGTCCAAATTTGTTTATGTACTATTTGTGACAAATTTCTCAAAATAAAAAATAATTTAAAAAGTTGACATTTTAATATTAATTCATCAAAATATACAATTCTTTTAAGTTTAATTACACTTTTTGTTCCCAACTTTCTTATTGACGATTAACGTCCCTCCAATTAGCAATCTTTAGTTTCTCAATTTTACAATTTTGGTCTCTGTATTTTTTTAATGTACTTCCGGTCTTCAAAAAATTGTAGAACGTGCACTATTAGTTCTCCACTAAAGTACAAGAAAATCAAAATTTAAAGAGACTAAAAGTGCAAATAAAAAATACAGAGAGAGAGAGAGAGATAGAGAAATTGCAAAATTGAGAAACTTGGTAGAATTAAATCGCTAAACTAAAAAAACTAAAAATAATACTACTAAACCTTTTTATTTGAAAAAAACCTAGGCCAATTAAGTCCCGAAGAAGTCGAGCTCTAAGTGCATTTAACAAGACACCAACACGAAACTCGAACTCATATACTTTTGCTATATGAGTTGAATCCTTTTGGACAGCATTTTACAGTCAGTTAAGCCGACTAGAGGAAGGAAAGATGCATGGCTATGGCCACATGATACTTTCAAGAGTTTTACGGTAAAATATTTTTATCATCAGCTGTCTTGTAGTGACATAGCTTCCAACATTTTGAACCATCAGCACTTGTTAGGGGGACTATGGAAATCTATTGTCCCTTCGAAGGTTGTAGTCTTCGGGTGGAGGTGACTGTTAGATTCCTTACCAGTGTGTGAGCAACTGTTGCACAGGAACGTCATCCACTCCAAGCTAGAAGTTGGTTGTTCTTTTTGTACTTCCTCTCGCGAGTCTGTCGAACATCTTTTCATCACTTGTGGTTTTGCGCGTTCTGTTTGACATATTGTTGGTACTTGGCTAGGTGTTGACGTGGATGTCTCTTTGGGTGTGGAGGATTTCTTGTTGGAGCATTTGGCTAGCTAGGAATGGAATCATATTCAAAGAGGAGGAACCAAATATAGAGGGGGTTGTTAACCGGATCAAGAACTTATATTGGAGTTGGTGTCTTTATAAACTCAACTGTAATTCATCTTTGTCTGTATCTCTATGGTGGTTTAACCCACCTACATTCCTTAACAATCTGTAATCTAGTAGGGCTAGGTTGTTGTTTTCCCACTGTGGAGCAGGTTGTACGAGGTACTCTTTTTCCCATTGGGTTTTGGCTTAGAGAGGTTTTAAGGAGGCCCTCCCCCTTTCCTATATCTCCATGGTAAGGGTTGGGCACCCCTTGTGCTCCCTTCAATAAATTTTTTGCTTATCTAAAAAAAAATTAAAACAATTTTTATTAATATAGTAATTAAAAATAATAATAAAGTTCTTATTTTCAAGATTAAAAAAATCAAGAGTTTTTTTTGGTGAATCAAAAAATCAAGAGTTTAAAGAATCAAAGAATATTTTGTTAGAATTTATAAGCAATAATAATAAATATATAAAGATATAATAGTAGTAACAATAACAATAAAATAAAGAAAAAGAAAAACCCATCGCTATCCTCCGTTATTATATTGAGGAGAATCATTACGACACCATAAGAAGCACCTTTCTTTCTTTCTTTCTTTCTCTATTTCTCTCTCCTTTTCTTTGTGTGTCTTCATGCGTTTCTCCGAAAACACAACCTTCTAACTGTTTTCCTTAATTTCTTCTTCACCGGAGAAAGACAGAGAGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03514.17	GRAS	299	679	4.10E-93

Gene family

Gene family	Subfamily
Transcription Factors Family	GRAS

Gene Ontology

GO term	Description	Category
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003724	RNA helicase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0016787	hydrolase activity	Molecular Function

InterPro

InterPro term	Description
IPR005202	Transcription factor GRAS

trEMBL

trEMBL term	Description
A0A1S2Z0G2	_

SwissProt

SwissProt term	Description
SCL8_ARATH	Scarecrow-like protein 8

KEGG

KO	Description	Enzyme
K27748	scarecrow-like transcription factor PAT

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G52510	SCARECROW-like 8
Medicago sativa L.	MsG0680032758.01.T01	_
Oryza sativa L.	LOC_Os02g45760.1	chitin-inducible gibberellin-responsive protein 2, putative, expressed
Cucumis sativus L.	Csa015436	_
Glycyrrhiza uralensis Fisch.	Glyur001434s00037076.1	_
Codonopsis lanceolata	Cl_chr03_48200T	_
Arachis hypogaea L.	AH15G36500.1	Scarecrow-like protein 8 like

Expression pattern