| Gene ID | Annotation |
|---|---|
| Am07G007220.1 | long chain base2 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am07G007220.1 | mRNA | Chr07 | 43110167 | 43123898 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00155.24 | Aminotran_1_2 | 102 | 460 | 5.10E-54 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0030170 | pyridoxal phosphate binding | Molecular Function |
| GO:0034312 | diol biosynthetic process | Biological Process |
| GO:0046467 | membrane lipid biosynthetic process | Biological Process |
| GO:0008483 | transaminase activity | Molecular Function |
| GO:0043604 | amide biosynthetic process | Biological Process |
| InterPro term | Description |
|---|---|
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR001917 | Aminotransferase, class-II, pyridoxal-phosphate binding site |
| IPR004839 | Aminotransferase, class I/classII |
| trEMBL term | Description |
|---|---|
| A0A072U8D8 | _ |
| SwissProt term | Description |
|---|---|
| LCB2A_ORYSJ | Long chain base biosynthesis protein 2a |
| KO | Description | Enzyme |
|---|---|---|
| K00654 | serine palmitoyltransferase | [EC: 2.3.1.50] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G23670 | long chain base2 |
| Medicago sativa L. | MsG0680031804.01.T01 | _ |
| Oryza sativa L. | LOC_Os11g31640.1 | serine palmitoyltransferase 2, putative, expressed |
| Cucumis sativus L. | Csa005262 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000763s00023755.2 | _ |
| Codonopsis lanceolata | Cl_chr02_09760T | _ |
| Arachis hypogaea L. | AH16G29600.1 | Long chain base biosynthesis protein 2a like |