Gene detail

Detail information of Am07G007100.1 Annotation

Gene ID	Annotation
Am07G007100.1	xyloglucan endotransglucosylase/hydrolase 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G007100.1	mRNA	Chr07	39197349	39199470	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM07G007100.1
CCTCCATTATCGCCGGGATCCCGTCGTTGTTAGGGAGGGAGAACGATGGAGACGGGTTGTACTGTTTCATTAATTAATGATAAGATGTTTGTGGAGATGAAAACTTATGTTGGATCTTTGTTTATTTTTTATTTTTATTTAAGGTGATGTTGAAAATTAGGGTAAAGGATATTCTTTGATCAGATTGGTAGGAGAATGAAAGAAAATTGAAGTGTGTATATAAAAGAAAATTGAAGAAGTGTGTATAAAGTGAGGATATTCACGAAAAGGGTTTTTCGCACTCATCAAATACGCCTTTGCACAGAAAACCAGTACATGTAACCTCATAAAATCAACACGAAACTGTAACCAACGTGAATAAAAAAAATTCGAAAATCTAAAGATTAAAGTGAGGAAAACTCACAAGTCTCGGAGTGAAGGCGTCGTTCACGGAGGAGGGAGGACGAAGCAGCGCCGTTCACGGAGGAGGGAGAAGCAGCGCCGTCGCTCACGAAGGAAGTCAGCCCCATAATCCTACATAAATACTGAACCTATGTATACGATTTTCTGCAGAATTTTTGATTTACAACTAATATAAAATACTTCTCACATTCCTTTAATAATCCAATCTATTCCAAGTTTAATACAACATATAAACACAATAGATAATCTTCAAAATCTAATCAGGGGCACTTCTTCAAAATCTATTCCAAGTTTAATACAACATACAACTAATTTTTTTTTTCATCAATCAACATTTTAATACAAAAAACATCCAAATACAAATCATTTCAGCACTCACATCAGAATCTAATCTTCAAAATCATATGACTCATGAAAGGAATGAAACTATGGCATGCCAAAAAACAAAACGAAGGAGGGATTGTGCATCGTTTACCTTCTGAGTTTTCACGTTCACGGAGGTGGGAGGAGGCGCTGCTTCGTTTTCACGGAGGAGGGAGGAGGCGCTGCTTTGTTTTCACGAAAGAGAGATAAGGCATTGCTTCGTTTTCACGGAGGAGGGAAGGCCATTCACGGAGGAGGGAGGAGGGAAGGCGTCGTCGCTCACGAAGGAAGGAAGGAGGGAGAAGCTGCTTCGGTTCACAGAGGAGGGAGGAGGGAAGGCCGTTCGTTCACGGAGGAGGGAGGGAAGCTGCAAAGGTTCGCAAATGGAGGCTACTGTGTGTGTGCAGTGTGAGGGAGGCGCGGCTGTGTGAATTTTCGCAAATAATGAGAGGGAGTTAGGGTAAAAGAGAGAAATTGGGCATCAGGAGCGCTTTTTAAAAAGCGCCCCTAAAGGCCCTGCGTGTTCTGGGCTTCAGGGGCGCTTTTTAAAAAGCGCCCCTGATGCTCAAAACACGCAGGGCCTTTAGGGGCGCTTTTTAAAAAGCGCCCCTAAAGGCCCTGCGTATTTGGGCATCAGGAGCGCTTTTTAAAAAGCGCCCCTAAAGGGTGCGCCCTCTTTCTACAGTTTTGTTGTAGTGGAACTGTTTGGGTGGTATGTGGATGTGAATGTGAATGATAATTGATGGGGGTCAAGGGTATGAGTGTTTTAAATTAAAAGGAATTGGTTTGAGTGATGAGTGTGGTGTGAGTGTGTGAGGAAATGAAGGTGACAAATGAGAGTTGGCCAGGGTGTGAAAGTAATGTGCGATTTTATAGTCAATTTGTTCTCTTTTCATTTTTGAATTAATTTGGACCATATGGTAAATGCTATATGTTGATTTATGCTTGACATAAGATTCACCCAGGAATGTTATTTTTGGTTACATATGTATTATTTTCATTTGGTACGTAACCTTCTATGTTGCTATTAATTTTTGCTTATTATTTGAGCTAATTAACCATTTTCAAGTGATCTTTTCAGTGTAATCAGTGGCACCACTTCAAAGTCATGGGAAAAGCTAGTTTCATATTTGGTGTTTGTTTAGTTTATGTTAGATTAGATTTGATAATATGTATTGGAGATTGTGCTGAAGACTTTGTAATATGTATTTGAGATTGTGATGTTTTGGTGCTGGCTTAGTTTAAGTTAGAAGTAATTTTTGGATAGTTTTGGTAATATGTTATGACTATGTACGTCAGACATCATCATGTAAAACATTTTTATGGAAAACAATTGAGGTTGTGCCGAAGATTTCGTAATATGTACTTGAGATTGTGATGTTTCATTTTTTAATTATTTGAATATTTGAGATTATACAGTATAGTCATGTCTCATGTATGCTGATCAGAAACCCTTTTTTGTTAAAAAAAAACTCTAATTTTAACATCGGTTCTCAAATAAGCTGATGTTAAAAATCAATATTTCATATCAGTTCTTCTAGATAATCGATGCCAAAAGTGATTTTTTATATCGGTTCAAATAAAAAACCGATGTCAAAAACGCGCTTACATTTGCTAAAAACTGACCGTTGATAACGGTTCTCTGTGAAACTGATATTAAAAATAGTTTCCGCATCGGTTACGCAACCGATATGAAAAGTACCTTTTTCTAATAACGCCTTTATCTACATCGGTTTAGTAACCGATAAGGAATGTCATTTTTAACCGATGTTAGATGACATTTCTGCAGTAGTAGGTGAATACATTCTTCACACATATGACATGGTAACTTAAAGAATTTGAAATTTAATTTCTTTTTATGATAGAAGTTTAACATATTTTTTCCACTGGGAAATTTATTTCTTCTTGTTACATAGTAGATAGAGATAATTAAGCGCATGATTTTATTGCAGTGTTACACAGTTTCATCGTAAATCACTATTTAAAAAGTAAGGATAAAGCGATCGATCATAACTCAAATATATATGATTATGACATAATCTAATCAGAAAGTGATTGATGACCAACGACCAGCTAGCAGTGAAGGCTAGCTTAGAAACGCATTACAGCCACAAATTGTTTTAAGAGAGTGGTCCAAGGAAAAGTCTTTGTGCTTATATATACCCTCTATATATAACTTTTATATATCCACAATCACAACAACAACACAAGTTGAAATACACAATTAAATTAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00722.24	Glyco_hydro_16	36	216	2.50E-58
PF06955.15	XET_C	243	290	6.10E-20

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH16

Gene Ontology

GO term	Description	Category
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Molecular Function
GO:0042546	cell wall biogenesis	Biological Process
GO:0071555	cell wall organization	Biological Process
GO:0030247	polysaccharide binding	Molecular Function
GO:0009835	fruit ripening	Biological Process

InterPro

InterPro term	Description
IPR010713	Xyloglucan endo-transglycosylase, C-terminal
IPR016455	Xyloglucan endotransglucosylase/hydrolase
IPR008263	Glycoside hydrolase, family 16, active site
IPR000757	Glycoside hydrolase family 16
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR044791	Beta-glucanase/XTH

trEMBL

trEMBL term	Description
A0A445LKH0	_

SwissProt

SwissProt term	Description
XTHA_PHAAN	Xyloglucan endotransglucosylase/hydrolase protein A

KEGG

KO	Description	Enzyme
K08235	xyloglucan:xyloglucosyl transferase	[EC: 2.4.1.207]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G13870	xyloglucan endotransglucosylase/hydrolase 5
Medicago sativa L.	MsG0680031715.01.T01	_
Oryza sativa L.	LOC_Os11g33270.1	glycosyl hydrolases family 16, putative, expressed
Cucumis sativus L.	Csa009060	_
Glycyrrhiza uralensis Fisch.	Glyur007318s00045760.1	_
Codonopsis lanceolata	Cl_chr01_54000T	_
Arachis hypogaea L.	AH16G28420.1	Probable xyloglucan endotransglucosylase/hydrolase protein B like

Expression pattern