Gene detail

Detail information of Am07G005340.1 Annotation

Gene ID	Annotation
Am07G005340.1	NAD-dependent glycerol-3-phosphate dehydrogenase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G005340.1	mRNA	Chr07	21469105	21473031	-

Sequences

CDS:

>Am07G005340.1
ATGGCTCCAGTTCCACAAGGAGGAGAAATTGTGGTACAGAACAACTTCAATGGTGCTACACACAGATCCAAAGTTACTGTTATTGGTAGTGGCAATTGGGGTAGTGTTGCAGCTAAACTTATTGCTTCTAACACTCTCAGGCTAAGTTCATTTCATGATGAAGTGAGAATGTGGGTATTTGAGGAGACTTTACCAAGTGGAGAGAAGCTCACAGAAGTCATCAATAGAATCAATGAAAATGTCAAGTATCTCCCTGGGATCAAGCTTGGAAAAAATGTAGTTGCAGATCCAGACCTTGAAAATGCAGTAAAGGATGCAAATATGTTAGTCTTTGTGACTCCACATCAATTTATGGAAGGAATATGCAAAAGACTTGCTGGAAAAATAAGGTCAGATGCTGAGGCTATTTCCCTTGTCAAAGGAATGGAAGTTAAAATGGAAGGCCCTTGCATGATCTCTACTCTCATTTCACATGAACTAGGAATCAATTGTTCTGTTTTGATGGGAGCTAACATAGCAAATGAGATAGCTGTAGAGAAGTTTAGTGAAGCAACTGTTGGATATAGGCAGAACAGAGAAGCTGCAGAGAGATGGGTTCAGTTGTTCTATACTTCCTATTTCATTGTCACAGCTGTTCAGGATGTTGAAGGAGTTGAATTATGTGGTACCCTAAAAAATGTTGTGGCCATAGCAGCAGGTTTTGTTGATGGTCTGGAGATGGGAAATAATACAAAAGCTGCAATCATGAGACTTGGTCTTAGAGAAATGAAGGCATTTTCAAAGTTGTTGTTTCCATCTGTTAAGGATAGCACTTTTTTTGAGAGCTGTGGTGTAGCTGACCTTATCACAACATGCTTGGGTGGAAGAAACAGGAAAGTTGCTGAGGCTTTTGCAAAGAATGGAGGGAAGAGATCTTTTGATGAGCTTGAAGCTGAGATGCTACAAGGCCAGAAATTACAGGGTGTCTCAACAGCAAGGGAGGTTTATGAAGTTCTAAGCCATAGAGGGTGGCTAGATTTGTTTCCTCTCTTCTCAACAGTGCATGAAATAAGCAGTGGCCTACTTCCACCATCAGCCATAGTTGAATATAGTGAGAAGCTACAAAGGTCATTCTAA

Protein:

Promoter(3k):

>AM07G005340.1
TTGAAGGAATTATGTCAGAAGGAACTCACGTGCATTATTTGTCTGAATGGTCTTGATAGACTTGCCAAACTGAATTTTGGCGTATTGAAAGAAGTATTTGATGGTGGTGCATCAGACTTGTTTTTCATCAAGTGGATATTGAGGAGTCGTCCACAATGGTTAAGTAGTTCTTGCCATCGTGTGTTGCATGTGGAAACAGTCTCCAAGTATCACGGTGAATAAGATCAAACAAATTATCAAAAAAGTTATTATGTGAAACAAAAGGCAGGCGTTTTAATTTGGATAGTGGGCTATTTAAACAAGAATCTGAACGAAAATTAGGTCCTTCAACTGAGCTACGTCTGCTTGAAAAGGAATTGAAGCTTCTTGAGTTCGAACTGTAACTTCATGAAGCCATGGACGTGGTGTGTTTTGAAAGTTTTGGAGTTAGAGAGAGAGAGAGATGTGCAGAAGAACAATGGTGATCATATGAGACGCGCAGAAGAACAATGGTGATTTTAAGATCCAGGGTTTTATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGAGAGAGGACCATACACGTAGGATTAGTCAAATTAGCCTAGGTGGTATGCCAAGTCTGCAGTCAAACAGACATGTAAGACACAGTTTAACGGACTTAGTGACAAAATGTTAAAAAGGATAACGGTGCAATGATTTTAAAACATAAGGGACCAATTCAAGACAAAAAAACATAAGAGACCTATTCAAAATCTGAAAATAAGTTAAGGGACCCCATAAACAATTTTGCCTATCAAAAATTGGCTACGTCAGAATCATGATATCTAATTAAGATTCCTTTGCTATTTTGATTAGAAAAGTTTTCTTGAATTAAACATACCAAAGAAACTAAAACTGAAAATTTTCTTTTAGAAGTAACATTATTTGATGAAGACAAAGATTGTTTCCCAACCGTTGAACTTGACTTGAGGACCATGTTTAACATTCTTTTTTATGTTTTAAAAAATTACAGTTGATAGCACATTGTCCGTGAGTCCAATCCAAACCAACCTGTCTAATATCAGATTGGTTTGGTTCGGATTTTGCATAAAAAATACTCAAAATCCAAATCAACCCAAACCAAATAAATATGATTGGTTTGGATAACAGATTTAGTCAAAACCTATCCAACTCAACCCGTGAACACCCTAATGTGTTACCATACACTTTCAACTAAGTGGAGCTTTGGATTGTCACTAGTCCTATACCCGTGCATCCGCACGGGTGACACTATATCTGTTATAATTTTTCTATGAACCCATAATTACTTTGAAATTATAAAATGTAATAAATGAAAAAGATAGAACTTGATGAAAAATGTTATATTTCAAGTTGTTTAAAAAACTTCTGTTCCAGAAAGTTAAAAAAATCAGTATCTTCTTCAAATCTTATAAATGGAGTAAAAATAATAAATAATAAATTGAGATTAAGATAAGATGAAGGGAAATACAAATCAGACATTAGTGAAAAAATCATTTATAAAAAGGCTAATCCTATAAATTATTTTGATTAATTGTTTCCCGTTTGATTAACAAAATCTAACGCTTTTCACGTTGGAATACAAAAGCAAAATATAAAAAGAATTTATAAATTAAGAGAGTCGATAAAATCATACATTAAAAAAACTAACGGTAACAAAAATTATAAAATAAGAGATAAAATTATAGCGTTAACAAATGATACTTTCCCGTTGGAATTGCTTAACAGCAATGAATTTGTAACAACAGAATATACCCATTCATATAAAACAAAGATATTATAAACACAAAATATGAAAGACAATTATAGTGGTAACAAAAATTATAAAAGAAGAAAGTTTTGAGTGAGAAATGTTTATTTATGAATGAAGAAAAAATAGTAAACCTAAATTAATATAAAAATAATTTATAAATTAAGAGAGTCGATAAAATTATACAATAATGAAAAATTTAGCGGATACAAAAATTATAAAATAAGAGATAAAATAGTAGATCAAATTATAGCGGTAACAAATGGTATTTTTCCATTGGAATTGCTTAACAACAATAAATTTGTAACAACAAGAGAACATGTTCATTTATATAAAACAAATATATTATAAAGACAAAATATAAAAGAATGAAGTTTTGAGTGAGAAACATTTATTTATGAATGTGGAAAAATAGTAAATCTGTATTAGTATAAAAAGAATTTATAAATTAAGAGAGTTGATAAAACTATACAATAAAAAAATTGAGCAGATACAAAAATTATAAAATAAGAGATAAAATATTAGATCAAATTATAGCGGTAACAGATGATATTTTTCCCGTTGGAATTGCTTAACAACAATGAATTTGTAACAACGGCAAAACATATTCATTTATATAAAACAAAGATATTATAAAGACAAGATTATTGTTGATAGCACATAGTCTGTGAGTCCAATCCAAACCAACCTGTCTAATATCGTATTGGTTTGATTCGGATTTTGCATAAAAAATACTCAAAACCCAAATCAACCCAAACCAAATAAATATAATCGGTTCGAATAACAGATTTAGTCAAAACCAATTCAACTCAACCTGTGAACACCCTAATGTGTTACCATACACTTTCAACTAGTTGGAGCTTTAGATTGTCATTTAAAATGATATGAAACAAAATTTGGAAGAGGAATGCAATGCATGGATTAATATTTAACCCACAGAGTGGTCCCTACTTAAATAAATAGCAAAAAACAACATTACTGTCCTGTCGTGTCCTGTTTCACACTGCAAGTTCAAACATAGACTAGATCGCCAGATTTAACTTTAAACTTAGTTTCCAACTTTGTTAAGAAATAAACATAGTTTCTCACGAAACTCATGTGACATCTCCGCCCCCCTCAATGACCCTTTTCTTCTTTCCCTCACATTCACTCTCTTCCTCTTCTCCTTAAAAACTTTTCCATTCATCAATCACAGTCTTCACTTCTCTCTTGTTCTTTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01210.26	NAD_Gly3P_dh_N	24	192	7.30E-47
PF07479.17	NAD_Gly3P_dh_C	214	362	2.10E-45

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0042803	protein homodimerization activity	Molecular Function
GO:0051287	NAD binding	Molecular Function
GO:0005829	cytosol	Cellular Component
GO:0016020	membrane	Cellular Component
GO:0005975	carbohydrate metabolic process	Biological Process

InterPro

InterPro term	Description
IPR036291	NAD(P)-binding domain superfamily
IPR011128	Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
IPR017751	Glycerol-3-phosphate dehydrogenase, NAD-dependent, eukaryotic
IPR006109	Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
IPR006168	Glycerol-3-phosphate dehydrogenase, NAD-dependent
IPR008927	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
IPR013328	6-phosphogluconate dehydrogenase, domain 2

trEMBL

trEMBL term	Description
A0A1S2XHR0	_

SwissProt

SwissProt term	Description
GPDA_CUPLA	Glycerol-3-phosphate dehydrogenase [NAD(+)]

KEGG

KO	Description	Enzyme
K00006	glycerol-3-phosphate dehydrogenase (NAD+)	[EC: 1.1.1.8]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G40610	NAD-dependent glycerol-3-phosphate dehydrogenase family protein
Medicago sativa L.	MsG0680031381.01.T01	_
Oryza sativa L.	LOC_Os01g74000.1	glycerol-3-phosphate dehydrogenase, putative, expressed
Cucumis sativus L.	Csa011299	_
Glycyrrhiza uralensis Fisch.	Glyur000091s00010506.2	_
Codonopsis lanceolata	Cl_chr05_04640T	_
Arachis hypogaea L.	AH19G13100.2	Glycerol-3-phosphate dehydrogenase [NAD(+)] like

Expression pattern