| Gene ID | Annotation |
|---|---|
| Am07G003240.1 | Transducin/WD40 repeat-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am07G003240.1 | mRNA | Chr07 | 11136898 | 11142222 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00400.35 | WD40 | 204 | 237 | 1.10E-27 |
| PF08154.15 | NLE | 17 | 84 | 2.40E-19 |
| PF20426.1 | NBCH_WD40 | 205 | 283 | 6.00E-11 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| GO term | Description | Category |
|---|---|---|
| GO:0030687 | preribosome, large subunit precursor | Cellular Component |
| GO:0043021 | ribonucleoprotein complex binding | Molecular Function |
| GO:0000466 | maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Biological Process |
| GO:0005730 | nucleolus | Cellular Component |
| GO:0005654 | nucleoplasm | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR019775 | WD40 repeat, conserved site |
| IPR001680 | WD40 repeat |
| IPR028599 | WD repeat WDR12/Ytm1 |
| IPR012972 | NLE |
| IPR020472 | G-protein beta WD-40 repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2XHJ2 | _ |
| SwissProt term | Description |
|---|---|
| WDR12_ARATH | Ribosome biogenesis protein WDR12 homolog |
| KO | Description | Enzyme |
|---|---|---|
| K14863 | ribosome biogenesis protein |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G15550 | Transducin/WD40 repeat-like superfamily protein |
| Medicago sativa L. | MsG0780040823.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g40930.1 | WD repeat-containing protein 12, putative, expressed |
| Cucumis sativus L. | Csa019522 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000418s00021350.1 | _ |
| Codonopsis lanceolata | Cl_chr03_39240T | _ |
| Arachis hypogaea L. | AH10G25470.1 | Ribosome biogenesis protein WDR12 homolog like |