| Gene ID | Annotation |
|---|---|
| Am07G003200.1 | PHD finger family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am07G003200.1 | mRNA | Chr07 | 10919624 | 10937938 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF12830.10 | Nipped-B_C | 1344 | 1541 | 9.60E-54 |
| PF12765.10 | Cohesin_HEAT | 856 | 897 | 3.20E-12 |
| PF20168.1 | PDS5 | 835 | 1023 | 3.30E-08 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:1990414 | replication-born double-strand break repair via sister chromatid exchange | Biological Process |
| GO:0010468 | regulation of gene expression | Biological Process |
| GO:0051177 | meiotic sister chromatid cohesion | Biological Process |
| GO:0009793 | embryo development ending in seed dormancy | Biological Process |
| GO:0034508 | centromere complex assembly | Biological Process |
| InterPro term | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR019786 | Zinc finger, PHD-type, conserved site |
| IPR001965 | Zinc finger, PHD-type |
| IPR019787 | Zinc finger, PHD-finger |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR024986 | Sister chromatid cohesion C-terminal domain |
| IPR033031 | Scc2/Nipped-B family |
| IPR026003 | HEAT repeat associated with sister chromatid cohesion protein |
| IPR016024 | Armadillo-type fold |
| IPR011989 | Armadillo-like helical |
| trEMBL term | Description |
|---|---|
| A0A1S2XHJ3 | _ |
| SwissProt term | Description |
|---|---|
| SCC2_ARATH | Sister chromatid cohesion protein SCC2 |
| KO | Description | Enzyme |
|---|---|---|
| K06672 | cohesin loading factor subunit SCC2 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G15540 | PHD finger family protein |
| Medicago sativa L. | MsG0680030951.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g01940.1 | sister chromatid cohesion 2, putative, expressed |
| Cucumis sativus L. | Csa004031 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000418s00021352.1 | _ |
| Codonopsis lanceolata | Cl_chr03_39140T | _ |
| Arachis hypogaea L. | AH10G25440.1 | Uncharacterized protein like |