Gene detail

Detail information of Am07G003060.1 Annotation

Gene ID	Annotation
Am07G003060.1	galacturonosyltransferase 13

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G003060.1	mRNA	Chr07	10639422	10644840	-

Sequences

CDS:

>Am07G003060.1
ATGCAGCTTCATTTATCGGTTAGTATGAGAAGCATCACAATATCAAGCAACAATGGCTTTATTGACTTGATGAAGATCAAGGTCGCAGCTTGTCACATTTCTTATCGAACCCTCTTCCATACAATCCTCATTCTTGCTTTTTTGTTTCCCCTTGTCTTCATTCTCACTGCTGTTGTTACCCTTGAAGGTGCCAACAAGTGTTCCTCATTTGATTGTTTAGGTAGGCGGTTGGGACCAAGGCTACTTGGTAGAGTTGATGATTCAGCGAGACTAGTTAGAGACTTTTACAAGATCCTTAACGAAGTGAAGGCTGGGGAAATTCCATCTGATCTAAAGCTACCAGATTCATTTGATCAACTTGTTTCTGATATGAAGAACAATCAATATGATGCGAAAATGTTAGCATTTTTATTAAGGGGAATGATGGAAAAATTTGAGAGAGAAATTAGAGAATCTAAATTTTCAGAGCTGGTGAATAAACACTTTGCAGCTAGTTCTATCCCTAAAGGGATTCACTGTCTATCTTTGCGTTTGACGAATGAGTATTCGTCAAACGCTCACGCACGCAAACAATTGCCTCCTCCAGAGCTACTACATATGCTATCTGATAACTCTTACCGCCATTTTATTCTGTCAACTGATAACATCTTAGCTGCTTCAGTAGTTGTAACTTCCACTGTGCAATCATCTCATAAACCTGAACGTATAGTCTTCCATGTCATCACCGACAAAAAAACTTATGCCGGTATGCACTCATGGTTTGCACTAAATCCTGCTTCACCAGCTATAGTTGAAGTCAAAGGCATTCACCAATTTGACTGGTTAACTAGAGAAAATGTTCCGGTACTTGAAGCGGTAGAAAGTCAAAATGGAATCAAGAATTACTATCATGGGAATCATGTTATGGAAGCCAATCTCAGCGATTCTGATACCAATCCACGGAAATTTGCATCAACATTGCAGGCGAGAAGTCCGAAGTACATATCTTTACTCAACCATCTTCGCATATACATACCTGAGCTTTTCCCAAACCTTGACAAGGTGGTTTTTTTGGATGATGATGTTGTGGTTCAGCGCGACTTGTCTCCACTTTGGGAAATCGATCTGAAGGGAAAAGTTAATGGAGCTGTGGAAACTTGCAAAGGTGAAGATGATTGGGTAATGTCAAAGCATTTTAGGAACTACTTCAATTTTTCTCATCCCCTCATTGCAGATCATTTAGAACCTGATGAGTGTGCATGGGCTTATGGGATGAATGTGTTTGATCTACGTAAATGGAGAGTAACAAATATTAGAGAAACATATCATTCCTGGTTGAAAGAGAATCTGAAGTCAAATCTAACAATGTGGAAGCTTGGAACACTACCCCCTGCTTTGATTGCATTTAAAGATCATGTTTTCCCAATTGATCCATCTTGGCACATGCTTGGTTTGGGTTATCAAAACAAAACCAATGTTGAGAATGTGAAAAGGGCTGCTGTTATTCATTACAATGGTCAATCAAAACCTTGGTTAGATATTGGCTTTGAACATCTTAGACCATTTTGGACCAAGTATGTCAATTATTCAAATGATTTTGTTAGGAGTTGTCATATCATGGAATCATAG

Protein:

Promoter(3k):

>AM07G003060.1
AATATATTTCACAACTGGGATATCTGACTCAACACAAAAGAGAGAGAATGCAGAGTTTTTGATGGATTTACCTATTTAGCCTATTATGATCCTATAATACGAATTGGGTAAAGTTCAAAAAGTAGTCCTGCCCAACGAAATCGAATGTCGTATAGATCCTCTTCATCAAATAGTTCAGTAGTGTTGAATCTCTACAATATGAATGACATAAGACTATACATTAGTTCATCAACTAAATACATCTTTAATACAACAATATTACGTACCTCCCTCCATAAATCAAGAATACATATCTAAAACTTTTCCCACATAAATATCAATGCTTTCTTAAAAACAACACAAAATTTACTTCAATCAGATACATACAGAAAACCATAGTTTATGAAATGGTCTACAATTTTCAACCAGAAATCAAAGTCCCCACGCATCATACTACCAAATAACTCTTAGCATAAACAGATAATGTCCACACTCTACATCTTTTAGTGAAAAATTCAAGACCAAATGAAACCTAAAAATCAAATCCAAATCTACACTCCATTCATACAAGCCTAATAAAGAATCAAACAGTATCCATTCTAATAAATAATAGGCTAAGAGACCGAGAGATCCTTAAAAATACGTATCTAGTCAATGCAACAAGAGCACTCTATTGAACTAAAAGCATAATACAAAATTTACAATCACAATAGTGATCAAGTAAACCCTCTTAAACCCTTTTTACAACATTGACCCAAATTTACAATCAAAATAATGAATACAAAACAAATGGACACAATTTATTTGCTTCAACCTTATGCCCTTGTTTGCCAATGCACATACACATTCAATTCGCCCTTTAGACAAGCATTTTTTATTCTAATCTGGTGCTCCTCAACCTTAATAGAAGGCACTTCATTAATTCGCTCTCCCGGAGATTTCTTGCATCTATGCTATTATTACAAAAGAAACAAATGTAAGTTTCAACACAATTTTCATACTCCAGCAAAGATCTGAGCAAAAAAAAGTGACTTGAGAATTGACTGATTATACCTGCCTTATAAGCCTCCCGATTCTCTATAGTATTGCATTATGTCAAAGTCCTGCATAAAAAATCCAGGTAGTAAATAAAGACCAAATGAGTCCAAATTATAGTATAGATAACTACAATAAATCCAGTAGTGTGTATTTATCAAATTCAACAGTGGCGCTAAATTGTAGAATTCTTGTAGTGATTACAATCAACATTGGCATGAATGAATGGCTTTGAAGATTGAAGCAGCATCCTATCACCATAAACTTCAAAGAGGAAATACTAACACATGTCATATCAATTATCAGCATTGATAAGAACCTTCAATAATTTCAGATGGCCTTCCCTTCCCTCACTGCTTCTGTAGAGGCATAGCCCAAAACAACCTCTATAAGAACAAGAGAACCTGTATGTTGTTGTTCCATCCTCTTTTATTATTACTTATACTATAGATTGTTTTATAAAGGACATTTGACATAATTGGTAAATTAAGAATGGTAGAGAGTCATAATCTCAAATAAGGATTCCTAGTGATCTTACTTACAGGGTTGACTAATTATTTATATTCATAGTCTATGACTACATAATGAATCTCAGTTCATTTAACTTTTGGGTCCACTACAACAAACTCTTAAATCCTTTATACCTTCCCAAATTTCCTAACAAACATAAAAATTGTAAATGTCACAAAGTAACACATTAATTTACCCAAATTTACAATCAGCCTGATGTGCATCCACCTCCTCATTCACCATCATATGCTTGAGCATATGCAATTCTACAGCGACATAAAGAGATATCATTTTAAACATTGAGAGAATAGATTGACGCCTAAGATGTTTAGAAAAATAAACTTACTGTCACGTGTATTTTTAATCTTTACAGAGGACCAATTTGAGTACTTAGACTTAAAAAACTAGCACAAGAAAACAATTGATAGTATCTACCAAATTATTGCCTTGCATTTCTCTAGAGGACCATCCTGATCTCCTCCATATCTTTAGAGGACCAAAGCAAGTAATAAGTGTCACAATAATGAATAGCAAAAACCTCATTAACAAAACAACAATAATAATGATAATAATCTACTCAATTTCTATATTATGTATATAGTTGCATAAAAATGAGATAATTAATAGTCTTTTTTGTTTTTGTTTTGGGATTGTATATGTATCTTAAAAACTAATATATTTGAGTCACCATATTATAATTAATTCAAAAAAATAATACCGAATTTTTTTTTTTTAATAAGCAATGTTAGTGGGGTGGGAGAATGTTAGTTTCCGGGAGTTGAACCGAGCTACCTACTTGGAATAATAGCAGAAAAGTTATGCCATTTCACTAATACAAAGTTTAGAGAGATTAACTAAAATTAACCAACACTCACTCATAAATGCTATCCACATAATCCTTTAACACTTATCCATAAACATAGGACTTGCCTAAAATTAACTACAAAAAACTATGTTCCATATTCCCTAATCTCAAGTACAAACATTAGCCCCACATTTCTCTCTCTCACACTCTCTCTAACCAAACACAATTTTGTTTGACTCACAAAGCTTTTTATATTTTTTTTCTTTCTATTTTCATAATTTTCCAAAAATAGAAAATAACTCTCTCTGTTTCTCTTTGTCCCTCTCTCTCTCTTCTTTGATCCATGGAGATGGAAGAAGAACTACGGCAGAACCCAGAAGAAAGTTGATTCCTTTCAGCCAGATTCAGATACCCATTTGGTTAAAACCCCCAATGCGGTCTTTTATAAGACTTTGGAAAGATTCAGATTCAAAGGGTCATCACCATCATCATCATCATCATCATCAAAAACAACAAAAACGTGGGTGTGGATCTAATGGTGGATTTTATAAGACCACCGTGTACATGGTAATTGTTGCTGTCGTTTCATGTGTAACTGCTAAAGTGTCGTTTGTTGTTGCTGTTATTGTCGGTGGCAACAATCTTGTGGTGCTGCAGCATCATAAACGACG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01501.23	Glyco_transf_8	173	507	1.60E-88
PF18404.4	Glyco_transf_24	333	434	2.90E-07

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT8

Gene Ontology

GO term	Description	Category
GO:0010192	mucilage biosynthetic process	Biological Process
GO:0009860	pollen tube growth	Biological Process
GO:0009555	pollen development	Biological Process
GO:0009832	plant-type cell wall biogenesis	Biological Process
GO:0070592	cell wall polysaccharide biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR029993	Plant galacturonosyltransferase GAUT
IPR029044	Nucleotide-diphospho-sugar transferases
IPR002495	Glycosyl transferase, family 8

trEMBL

trEMBL term	Description
A0A1S3DY61	_

SwissProt

SwissProt term	Description
GAUTE_ARATH	Probable galacturonosyltransferase 14

KEGG

KO	Description	Enzyme
K20867	galacturonosyltransferase 12/13/14/15	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G01040	galacturonosyltransferase 13
Medicago sativa L.	MsG0780036418.01.T01	_
Oryza sativa L.	LOC_Os12g38930.1	glycosyl transferase 8 domain containing protein, putative, expressed
Cucumis sativus L.	Csa020475	_
Glycyrrhiza uralensis Fisch.	Glyur000709s00024180.1	_
Codonopsis lanceolata	Cl_chr03_47310T	_
Arachis hypogaea L.	AH14G35550.1	Probable galacturonosyltransferase 14 like

Expression pattern