Gene detail

Detail information of Am07G002390.1 Annotation

Gene ID	Annotation
Am07G002390.1	myb domain protein 30

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G002390.1	mRNA	Chr07	8041016	8042780	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM07G002390.1
ACCCCCTTCCTTTGTAAGTAGAAGCTTATAGTCCTTCCTTACAACAGAGATGATAATTAACTTAATCGGTGCAAGTTTGACAAGAAAAGAAAAATGAAGATGTTGAGTTTTAAGTCACTCATAATCATTTTTCTTGTTTTTTAGCTAAATTGGCACCGATTAGGTCACCGTATCAATCGTGTGAACATGGACAACTATGTGTTTTTACTTATGTGGGGGCATTATTGTTGTTCATCATTAGAGTTTCAACCTATTTTTATGCATCGGTCCACCGTAGATCACATGATTCACTCTCCAACTCTTGAAGCCGCCTTCGCAAAAATAGTCTTTCAACTTATTTTTTGGCTAATTTAGTCATCATAAATTCCAAATGTTACAATATTTGGTCGGCATTTTCTAACGGTACTTTGGAGTCTCAAATTAAGGATTTTTTGTATTTTTAATCCCTAACAATCATAATTATTGACAAGAAATAAGTAAAAATGAAGATGTTGAGTTTTAAGTCCTCATAATCGTTTTTCCTTGTTTTTAGCTAAATCGCCACTGATTAAGTCACTGTCTCAATCGTGTGAAGATAGAGAGGGCTATGCGTTTTTACTTATGGGGGCATTGTTGGTCATCATTAGAGTATTGACCTATTTTTAAGCATCGGTCCACCGTAGAGCTCATGAATCTACTTTCTATATCTACTTTCTATATAATCAAAACATATGCTAGCACATTTATATTTTTAGACATCACCAAATTTTGACATTTGTCACAATTTAAGGGCAAAATAGACAATTCACCACATAAAGACAAAATGCTACAGTATCACTACAGGGCGCTACAGTGACATTTCTGGCGCAGTACCAATACAGTTTTTTTTTAAAATTCAATTTTTTTAAAAAAAACTGTTTTTTAAAAAACTGATTTTTAAAAAAAATTATACACTGTTTTTTTTTATTTTTTTTAAAAACGGTTGTCAATATTTTTATAAAAACAATTAGTCACTATAAATCAATTTTCACTATTTTTATAATCTACTCAAACTACTAAAATTAATAAAATAATTACAAAATCAATTTAACTACATAAATCAATTAGCCACTATCCATTGTCAAAAAAAGAATTGTAAAAAAACTTTAACCCCTACCAAAAATTACAAAATAACTACTAAAACTAATCAATTTAACTACTTTTGTTAAAATCAATCAATTTAACCACTATAAAAGATTACCAAATAACTATTTTATAATTACTAAAAAGTGAGGGACAAAAAACTGATTGAAAAATGCAATCAGAAGCTGCAACCGACGCAGCAAAAGGACAAAAAACAGCAAATTTTAAAACCAACTTTTTTTCAGTTTTTTTCCAATTTTTTTTTCAGTTTTTCTTTCCATAAAAAATCACTTTTTTGTCAGTTTTTTTAGTAAAAACATAACTTTTTTAACTGTTTCTATAATTTACTCAAACTACTAAAATTAATCAATTTAACTACTATCAATTGTTAAAAAAACCATACATCTAACAATAGTTTCAAAATTATTTATTCCAAAAAAATAAATTATTAAATTAATATCACACTCAATAATTAAATAATTTAAAATTTACTATTTACTATAATCTCTCTAATAAAACTACTAAAATCAATCAATTTTTCATGTAATAAATAAAATCAATCAATTTAACCACTAACAATTGTAATATTAAATCATATAGAAAAAAGGAGAAAACATGTGGCAACGGGAGCGGCAACGAGAGACTGACAACGAGATCGGCAACGAGAGCGGCAACGGGAGTGCCAAGTGCCAACAAGAGAGGGAACGAGAGCGCCAACGAGAGAGGGAACGAGAGCGACGGGGCTGATCAATATTTTACCTTTTACTCCATTATTAATATTATAAGAAGATACCGATTTTGTTTCTTCATTTTTACTCCATCTAAAATTTATTATTTACTATAATCTCTCTTTTAAAACTATTAAAATCAATCAATTTAACCACTAAGAATTATAAAATTACAACTTTAGCCACTACCAAACTTTACAAAATAACTTACTTATAATTAAACGAATATGATTTAATTAATATTAAATCATATAGAATAATATGAGTTAACATGTGGCAATGGCAGCGACAACGAGAGACTGGCAATGGGAGCTGCAACGGGAGTGGCAACGAGAGAGGTAACGAGAGCGCCAACGGGAGGGTCAACGAGTATGCAAACGGGAGTGTCAACGGGGATGCATATTTTACCTCTAATGTCCAAATACATTATTATGGATCAATGTAATTCTGATTGTCAATCTACTTTAGTTTTTTCGACTCAATATAATTTTCATTTGTATCTTATATGACATAATACCCATCTCTTTCCACTTTGAATTTCGAATCATACATTTTGGACATTGTTCACAACTTATGGTTATCTTCCAAATTACTATTATGACTTCATGGCAATACACCGACCATACAGTATCACCACCCGTGCGTATGCACGGGTAAAATACTAGTCATAATAAACATATCTACCATAAAAAACAATGTTATAAAAAATTTCACTGATAAACCACAACAACTATTCACAAGTACACAAAAAAAAAAGGGAATATGAAAGCTTTAAGTTAGCTATAGGTCACACCACCAATATATCATCTCATTAACATTAAAGATAGTAGTAGATAATAGAGCTTTTCCCAGTGCATGCAGTCACATTGAATGCACAACGCGGTTTTGATAACCACAAAAAGAAAGAGAACTATAGCCACTACTATTACTATTGAGCTGACTTTTGCTATCTTAAAACTCCTTAGTGTAAATAAATTTAATGCTTTTGCTGTCAACTTTTGACTATTTCCTTTCCCTAGTCAACACACTCTTTTTCCATCTCTTCACTTACCCTATTTATACACCTTCACCTTTTGACTCTTGCCTTATCACTGATCAGCTACTAATAGCAAAAAATATAGAGAGAGAGAGAAGCTATATTTTGAAGCATAGAAAGTGATTTTGAAAAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	4.70E-32
PF00249.34	Myb_DNA-binding	67	112	4.70E-32
PF13921.9	Myb_DNA-bind_6	17	76	3.60E-19
PF13921.9	Myb_DNA-bind_6	70	125	3.60E-19

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0003677	DNA binding	Molecular Function
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0010597	green leaf volatile biosynthetic process	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A2K3MXL4	_

SwissProt

SwissProt term	Description
MYB30_ARATH	Transcription factor MYB30

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G28910	myb domain protein 30
Medicago sativa L.	MsG0680030764.01.T01	_
Oryza sativa L.	LOC_Os08g33940.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa017450	_
Glycyrrhiza uralensis Fisch.	Glyur000496s00030952.1	_
Codonopsis lanceolata	Cl_chr03_37240T	_
Arachis hypogaea L.	AH14G45180.1	Myb-related protein 306 like

Expression pattern