Gene detail

Detail information of Am07G002360.1 Annotation

Gene ID	Annotation
Am07G002360.1	ATP-dependent RNA helicase, mitochondrial, putative

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G002360.1	mRNA	Chr07	7875370	7880054	-

Sequences

CDS:

>Am07G002360.1
ATGGCTAGAGGCCCTGCTTCCTCTCTCTTTCACTTGTGCACACGAAAAAGAAGAACTTTTTCAAATTTCAAAGCTCTTCTCTTCAACCAAAACACTTCTCCACCTTCTCAATTTCACTCTTCTGTTAACCCTTTTCGCCCCTTTTCGACCCATTTGCTGAACCCGCGTTTTCTCCCTAGTTTCTCCCAAAGTTTAAATCTTTCCGGCGTTTCAACTCTACCGACAAGGCCGTTCTCCACCACCGGCGACGAGGGTGGCGCTGCTTCTGAACCTGATTGTGAACTTGACGTGGGCACCGGTAAATGTTTTGATTTAGAACTTGGAAATGAGGTAAGTGATCATGTTCATGCTTTACCTAAACACGTGGTTGTTGATTATGATAGTAATGATGAATGCAATTTGGAGAATTTTGAATCTGTAGAATATAATAATAATGATGAAGATGAATTTGAGAAGAAGAGTGATGGTGAATTTATGCACGTGGGATCACGTGACCCTGTTGAATTATACAATGAGCTTAAGAGTGTGGAAAGGCGTGTAAGGCTGAATAGGTCAGAGGCGGAAGTGTTGGGAGATGTGTTTCATTCTTTTGCTAAATCAGGTTGGGCATCTAATCAAGCACTTGCTATTTACATTGGTTTATCATTTTTTCCCACTGCAGCACACAAATTTCAAAACTTTTTCAGGAAGAAGTGTTCTGAAGATGTTGCTAAGTATTTGTTGTCACTTGGTTCTGGTGATGATGCTGTGAGGTTTTTGTTTCCTATATTTGTTGAATTTTGTTTGGAGAATTTTCCTGATGAGATTAAGAGGTTTAGGAGTATGGTTGAGGGGGCGGATCTTACGAAACCTCATACTTGGTTTCCTTTTGCGCGGGCCATGAAACGGAAGATAATTTATCATTGTGGGCCGACTAATAGCGGTAAAACTTATAATGCTTTGCAACGGTTTATGGAGGCGGAGAGAGGGATTTATTGCAGTCCGCTTAGATTGTTGGCTATGGAGGTTTTTGACAAGGTTAATGCGAAGGGTGTTTATTGTAGTCTCTTAACTGGACAAGAGAAGAAGCGTGTCCCGTTTTCAAATCATGTCGCGTGTACCGTGGAAATGGCCTCGACGCAGGAGATGTATGATGTGGCTATTATTGATGAGATTCAAATGATGGCGGATCCGTATAGAGGGTATGCATGGACTAGGGCGCTTCTTGGGTTGAAGGCTGATGAGATACACTTGTGTGGTGATCCTAGTGTTTTGGATATTGTTCGAAAGATATGTCAAGACACGGGAGATGAGTTGCAAGAGCAACAATATGAGAGGTTCGAACCATTGGTGGTCGAAGCAAAGACTCTACTTGGAAATCTTCAAAATGTTCGGTCCGGGGATTGTATTGTTGCATTCTCAAGGAGAGAGATATTCGAGGTTAAATTAGCCATCGAGAGAGAGACTAACCATCGATGTTGTGTGATTTATGGTGCGTTGCCACCAGAAACTCGTAGACAGCAAGCCAACTTATTCAACGATCAAAGTAATGAATACGACGTTCTTGTAGCTAGTGACGCAGTGGGGATGGGCCTGAACCTTAACATTAGAAGGGTGATTTTTAATAGCCTTACAAAGTACAATGGTGACAAAATGGTTCCTGTTCCCGCATCACAGGTTAAGCAGATTGCAGGAAGAGCTGGTCGGAGAGGATGCCTTTATCCCGATGGACTCGCCACTACCCTACATTTAGATGATCTGGATTACTTGATTGAGTGTTTGAAACAACCTTTCGATCATGTTACGAGAGCTGGCCTCTTTCCTTATTTTGAGCAGGTTGAATTGTTTGCTGGACAACTTCCTAATATGACGTTCAGCCAGCTTTTAGAAAAATTTGGTGAAAATTGCCATTTGGATGGCTCATACTTCTTGTGTCGACACGATCACATAAAGAAAATTGCTAATATGTTAGAGAAGGTTCAAGGATTATCTTTAGCAGATCGGTTTAACTTCTGTTTTTCACCTGTTAATGTTAGAGATCCAAAAGCTATGTACCACTTACTCAGATCTGCTACGTCGTTTGGTCAGAAGGTCCCTGTAAATATAGCAATGGGCATGCCAAAAGGCTCGGCGCGGAATGATTCAGAACTCCTAGACCTTGAGACTAGACATCAAGTGTTATCTTCATATTTATGGTTGTCAAACCACTTTGATGAGGAGCAATTTCCATATAAAAAGAAAGCTGAGTCAATGGCTACAGATATTGCTCACTTGCTGAGTCAATCTCTTATCAAAGCTAATTGGAAACCTGAATCAAGGAATAAAGGGAAACCAAAAACTGAAAAAGCCAAAGAACAAACAGAACCAGAAACTGCAGACGTATTAAAAACTGCAAAAAAGGAAATCGGTTATTCAAGACCACAATGTCTTGTTAAATTATATGACCAGAAATGGCGTGAAAAATTCCGCACACCTTGA

Protein:

Promoter(3k):

>AM07G002360.1
CGTACCATCGAGCAATACTTGCGAGCCTTTGTTCATGACAAGCCTTCTTTGTGGCATAAGTTCTTACCTTGGGCGGAATACCACTACAACACCGCTTTCCACACTTCAGCAGGTATGACTCCATATCAAGTGGTTTATGGAAAACCCCCTTCCACGATTCCTATGTATGTGGCTGGTTCTTCCGAAATTGCTGCAAGCGACGCCTTACTTTGTGACAGAGAGGAAATTTTAGCACAGTTGCGTACTAACTTGGCCAAAGCTCAAAAAAGAATGAAGGCTGTGGCTGACAAGAAGAGGCAAGAGGTTGAGTTTGAGGTTGACTCTTATGTCTATGTGAAGCTTCAGCCATATAGGCAAACATCTCTGTCAAGGGCTAAATACAATAAGCTGAACAAACGTTATTATGGTCCATTTCGCATCCTTCAACGCTTGGGTCCCGTAGTGTACAAGTTGGAGCTCCCTTCATATGCCAAAATTCACAATGTCTTCCACTGTTCCTTGTTGAAACAATATTTGGGTCCTATTCCACCATCAGACTTTTTGCTGCCACCTGAGTCTGTTGATAATCACCCTGTGATCACTCCTTTGGCTGTCTTGGACTCTCGGGTTACTGCAGTAGATGGACAGCAGAAGGAACAAGTGTTAGTACAGTGGCAAGGTCTGCCTCCTGAAGAAACATCCTGGGAAAATTGGGAGGACTTACAGCAATGTTACAACCTTGGGGACAAGGTTGACTTTGAAGAGGTGGGTATTGATACGGATCCTCCTAGTCTTGGCCCAATTACTCAGCCCACTGTTGGCACTAGGCCCATCCGTGAGAAGAGACTTCCAGCTAGATTCCAGAATCATCTCATGTACAAATGACTCAACGAATCGTTTGTTAGGATTTACATATCTTTAGGCTAGATAATTTCTATATTTCCTCTTTCTGTTAAGCATCTTATCTTTTCCGTTTTCTATGCTAAGCTATACCTATATAAGCTTGTACTTTCTTTTATGAAATCATCAATGAAACAATTCAATTCCTAATTCCCCTCTTTATCAGTTGCTTGAAGGAGGTCGTCAGTCCTCGAATTCTGACTAACATATTAGTAGTTTTGGGATTTTTTAAAATTAGGGGGTGTTTGTGAGTAGGAGGCAGAGTGTGAAAAAAATGGGCAAAAAAGACAAATAGGAATGATTATGAAGATCACAGGAAACTCCATGTGTATGGAACCAGTCAATAAAATTTACAAATGTTGTAATCTATATCGTGAACCTAGAGGCAATTTAGAAAATGGAGTACGGTCGATGTTTTATGGAGTTCTTTCTCACACGTTTATCGTAACTGTGGTGTTCAAAACCGAACCAAACTAATAGAAAACCGTAAACTGAATCAAACCAAACCAAAATTCGCAAAAAACCGCTTCTTATTGGTTCGGTTCGATTTCTTTTTTCAGTGCACCGCGCGGTTCGGTTCGGTTCGCGGTTTCGATTACAGAAAATGAACCAAACCAAATCAAACCGCAAGTAACACTAAGACTTGTTGACTTACAATCTTCCTTACTAGCCCAAATGCAACTAAAACCTAACTCTCACTCACTTACTAGGCCAAATCCAATTAATTCTTTGACTCACTTACAAACAATTCATATTGTTATGCTATATTTAAACATTACAATAAAATATTTAATTCAAATTCTTTTAAAGATTGTCATAGCTATCTTAAAAGAGAGTAATTTATATACTACATATATTTAAGTAGATTTTTTCTTAAAGGTTTATGTTAGCCATTTTTTATGTGAGTTAATTTTAACTTCGTTTTAAATTATGTTTTGTCTTGGAAAAAACCAAACCAACCGAACCAATTCAAACCGCATTGGTTTGGTTTGGTTTGGTTCGGTTTTCTTTTATGAAGCCAACCGAACCAAACCAAACCGCATGTAGTTTTATCTTGCGGTTCGGTTTACTTTTTGTCTCAGAACCGAATCAAATCGCACTGCGAACACCCCTAATCGTAACGAGTTCTCGAGAAAGACTAGTGCAAATTTTTTGGTTCGAACGATCGCCGATTACCCACGGAGTGTCCCAATGCTTTTAACGAAAGACTAATCTCCGCTCGTGTTTTGGATCAAATTTCTCCCTGGCCAACAGCGAGCTTGTCCACTGTGGGAATCGAATTCGAGAGCATCGGGTCGACCCATCGTGTCCCAAAGTAGATTAATCCACCGGGCTTCGCTAGACTAATGGCAAATTTGTCATTCATGTTGAAATACTAATAATCAAATTTAGAAACACCCGGACATCAAGTGTTCCAACATAAAACTTTTATGTTTAACCAACACCGTTGGCCCAATGACTTGAGCTACCTAGGATACAGGATCAACCCGATGCTCCCAGGTTCGATTCTCGAAGTATGTGTAATAACTATTATTTTCTTTTTAATGTATACATAAGTTAGCAATTATTGTCTATTTTATCAAATTTTATTTTGTATAAACAGATCTCATGAAAATAAAATAAAACTATAAATAAAATAAACAATAGTTTTATGATGTTATTATCAAATGTTATTTTGTATAAATATATTTCATGAAAATAAAGTAAACAAGAATTTTTTAAGATAAAAATAAATATCTTATAAAAAAAAGATAAAATAAATAACTTTAAATAAAAATATCACACCACTAAAAGAAAAAAAAGGGAGTGCAAATAGAAACAATAATATGCCAAAATGCACAAAAGGGTAGCCCATGAACAATATTTGCAATTGCAATGGCGGTAGCTGTCATTATCAACCTGCCATTGTTAGGGTTTAACAATAACCAGACCTTTCCCTCTCTTCACTCTCCATCCCTCTTACCTTCTTACCTTTCAATACATCAACAATTCTTCCTCTGATTTTTTTCTATCAAAAATTAAAATTTTAAAACAAAAATTTGAACTTCAAAACCTAATACAGATGCTCTTATTCATTCTCTTCCGATTTCACAATTGATTTATCTTCTATTCTCAATTTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF18147.4	Suv3_C_1	646	687	1.60E-14
PF00271.34	Helicase_C	452	564	5.30E-13
PF12513.11	SUV3_C	710	756	2.30E-11

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005524	ATP binding	Molecular Function
GO:0005975	carbohydrate metabolic process	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Molecular Function
GO:0003677	DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR044774	Suv3, DEXQ-box helicase domain
IPR041082	Suv3, C-terminal domain 1
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR022192	Mitochondrial degradasome RNA helicase subunit, C-terminal domain
IPR001650	Helicase, C-terminal

trEMBL

trEMBL term	Description
A0A9D5BG63	_

SwissProt

SwissProt term	Description
SUV3L_ARATH	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial

KEGG

KO	Description	Enzyme
K17675	ATP-dependent RNA helicase SUPV3L1/SUV3	[EC: 5.6.2.6]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G39840	ATP-dependent RNA helicase, mitochondrial, putative
Medicago sativa L.	MsG0680030753.01.T01	_
Oryza sativa L.	_	_
Cucumis sativus L.	Csa005765	_
Glycyrrhiza uralensis Fisch.	Glyur000496s00030949.1	_
Codonopsis lanceolata	Cl_chr01_38320T	_
Arachis hypogaea L.	AH08G25250.1	ATP-dependent RNA helicase SUV3L, mitochondrial like

Expression pattern