Gene detail

Detail information of Am07G001860.1 Annotation

Gene ID	Annotation
Am07G001860.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G001860.1	mRNA	Chr07	6148177	6149997	+

Sequences

CDS:

>Am07G001860.1
ATGGATCTCAGAAACATGTCTTCTTCGTTCTTCCTGCTATCTTTAGCCTTTCTGGGTTTATGGGCATCTTTCGTTTCATCGCAGGTTGATGAAGACAGCGTACGATGTTTAAGAGGGATCAAAGACAACCTCGTAGACACCGATGGTCGGTTGTCCACGTGGCGGTTTGAAAACAAAACCGTAGGTTTCATCTGTGACTTCGTTGGTATTACTTGCTGGAACCTAAGAGAGAATCGAGTTCTAGGTTTAGAGCTCAGAGAAATGAACCTTTCTGGTAAGATCCCTGAGTCTTTGAAATACTGTGGTAAAAGTCTTCAAAAATTGGATCTTGGGTCAAACTCGTTGACTTCTGAGATTCCAACTCAGATCTGTAGTTGGATGCCTTTTTTGGTAACTATGGATTTATCTGGTAATGATCTTTCTGGTTTTATTCCACCAACACTTGTGAATTGTTCATATTTGAATGAATTGGTTTTATCAGAAAATCATCTTTCTGGTTCAATTCCTTATGAATTAGGAAGTTTGAGTAGACTTCATAAGTTTTCTGTGGCTAATAATCAACTTAAAGGGACTATTCCTTCATTTTTTGATGGTTTTGATAGAGAAAATTTTGTTGGTAATAGTGGTTTATGTGGTGGTCCACTCGGATCTAAATGTGGTGGTATGAGTAAAAAAAATCTTGCTATTATTATTGCTGCTGGTGTTTTTGGTGCTGCTGCTTCTTTGTTATTAGCTTTTGGTGTATGGTGGTGGTATCATTTGAGGTTAAGTGGCAATAGGAGAAGAAAAGGAGGTTATCAAGTTGGTGTTACTCTTTTTCAAAAACCTATTGTGAAGGTTAAGTTGGGGGATTTGATGGTGGCTACGAATAATTTTAGTTCTGATAACGTTCTTATTAGTACTAGAACTGGGGCTACTTATAGGGCCGATCTTCCTGACGGTTCGATACTCGCGGTGAAACGGTTGAATACATGTAAGATTGGTGAGAAGCAGTTTAAGATGGAGATGAATCGGTTGGGACAAGTTAGGCATCCAAATTTGGCGCCGTTGTTGGGGTACTGTGTTGTGGAAGAAGAGAAGTTGTTGGTTTATAAGCATATGTCGAATGGGACTTTGTATTCGTTGTTGCATAAGAATAGTGGTGTGTTGGATTGGATGATGAGGTTTAGGATTGGTTTGGGTGCGGCTAGGGGACTTGCGTGGTTGCACCATGGTTGCCATCCTCCGATTATACAACAAAACATTTGTTCTAATGTGATTCTTGTTGATGAAGAATTCGATGCTCGGATAATGGATTTTGGACTCGCCAGGCTTATGACGTCTGATTCCAATGGTAGTTTTGTGAATGGTGATTTGGGGGAACTCGGTTATATAGCTCCTGAGTATTCGAGTACGTTGGTTGCTTCGTTGAAAGGGGATGTGTATGGATTCGGAGTTTTGCTTTTGGAGTTGGTCACCGGGCGTAAACCTCTCGAAGTTAGCAATGGTGAGGAGGAATTCAAGGGTAACTTAGTGGATTGGGTGAATATGCATTCTAGCTCAGGTAAACTCAAGGATTGCATTGATAGAGCGATATGTGGAAAAGGACAAGACGAGGAGATTCTTCAGTTTCTCAAAGTCGCATCGAATTGTGTGGTTTCTCGCCCCAAAGATAGGTGGTCTATGTATCAGGTTTATCATTCTTTGAAAAGTATATCGAAAGACCACAGTTTCTCTGAACATGATGATGAATTTCCCTTGATCTTTGGTAAGCCAGAGAACGAGCCGGCGTAG

Protein:

Promoter(3k):

>AM07G001860.1
AATACACACAATTATTTGTGATATACACATACAAAACCTTGTTTTGTACGATTTAAAAATTTCCTCTTAACAATTCATTTTATGTAGGTATATCCCGCACGAAAGGGGCCACTTTAGCTACTATTGACTATTGAGGGCCGTAAGGAGCTTGTGCCTTAGGTTACATATGAGATGGTAGATAATGTGTAAGATGAGGTGCCTCCACTTGAGGTGCCTATAGCCGTATAGACCATATTTTTGAGGATATGTCGTCGTGATGGATTCGTTATAATGTATAAATTGTGTGTAGTTTGAGCTATCATACTTTTTTTGACAAATTTTGAACTATCATATTATAAGTACTTATTCATCAATTTTCTGATAAATCTCCAATATGTCACAGGGAAAACCACATATTTAATCAACTATTTATGATGTTCATTAGTATTGAGTAATTGAAAAACTATTTTTTGAGAAATAATATATCTTTTAAAATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATAATTCTTCATCCAATTTTGTCAAAATTCTTTCATAGCAAAATAAGAATGATAGACTAACTTATATTTTTTCTTCCATATATTGTATTTTAAATATGATAGTCAAGGAGATGTTTAAAAGGAATCATTATTTTTTCTTTTCTTTTATACTCCTCCAACCCAAGCCGTCTCTCTCTCAACTTTCTCTCAACTCCCTTCATTCTTTCTATTCATCTATCAAAGATGGGTGGTTTTAGGCCATTTTTTTGGCTTATTCTGTTTTGATTTTTGTCTTTTTTATCCAAATAAGTGGTTTCCAAGTAAATATGGTTTTTCTTTCGTCGCCTGAGTGTGGCGTTATTTTGTTCGTCGTTTTGGTGTGGCGTTGTTTGGTTTCCCATCTTATTGCGATGTTTGTTTGATTTAGATTGATAGATCAATTTCGATTTATTACAGATTCAATCAATGGCTCGAGCGTCAACATTACAGATCCAAAGACATTGGTATTCCAATTACTTTGATTTTATAACATTTATAGGTATTGTATTTTGTTGTTTTATTTTTTAATCTGGGTGTTATATATGAATTTGTTCGTAGATTCATCTTTTTTGGTTTTATCGATGTTGAATTTGTGTAGTTTCTGATGTATTCTACAAATTTGGATGAATAGATATAATTTTTATTCATGAAAAAAGTAAGGAGTGTTTAACTAACTATTTATTGTAATCCATAATACTTTCTTTTAAATGTGTAGTCAATAGTAGTTAGTAACTACTAATAAAAAAAATAGTAGTTAGTAACTTAAAATAAGTTATGCTTTTTTTTTACAATAAAATATGTTATGCTTATTGATCCCTGAATTTTGTATATATTGGATGACCATTTTTTGTAGAGTTTTTTTTTAAGTTTTATATATTCTAAAGTTTTTTTTGGGTAAACCCGGGTATCCACCGCACGGACAGCAGTGACTAATCTCTCGCTCATTGTAGGTGCTTCGAGGGGCAGGACAGCTGGCCCAGAGTTTTAACGTTGCTCCATACCCAATGCGGGGATCGAACCCCCGACCATTGGTTAAATGAGGATCTTGTCAAGACATTGAAAAATCAAAATATGTTTGTGCATGGAACAAGTTAAACATGCTAGTATATGTTTTGCAAAAAAAACATGCTAGTATATATGCCATATATATTTAATCTCCTCCTTTTAACAATTTGTTTTCAAAGTACCTCATCTCATTTAATTAGGACATTTTGCTTTTAACAGGACAATTAGAAAACCTAAAACCTAAGCCACATATTTTTTTGGCGTTAAATATAATTTTATTAACGAAAGTCTGGTAATAAGTCAAAGGCCATGAAATTGAGTTAAAGTCGAAGACCGCGGAAATACAAGTTACATGTAAAAAATTTAATCCCTTCCTTTTAACAAATTGTTTTAAAAAATACCTCATTTAGTTAGGAAAAATTGTTTTTGACAGATTAATTTATTAGGAAACGTAAGAAACCTAATCCATATCTTAGAGACTGGATTAATGATAAAAAAGTAAGTAACACCGGTGTCTAAAAAACTCATTAGCTATTTTATAACACAAAATAGTAAACAAATTGAAAAACATGGAGGTGGATACTATACTTAATTGATTGAGATCATCTCTATTTCCCAAAAGAAATGAATAATTCATTATTCATTACTTAAATTTTGAATATACAAAATATAAAGATACCTAATATATATCTTTTATTTTAAAAATGTGTATTTATATATTTTTTTGTATAAATCAGGGTATTTACCGCTGAACGCAGTGACTAATCCCTTCGTTGGATTAGAGACACCTCGAAGGGTAAGACATCTCACCAGAGATTTAAAACTGCTCTGTACCCAAGGCGATGATCGAACCCTGAGTTATGTGTATTTATATATCATAATTTATATAAGTGAAATCCTCCATTTCAATAAAATAAAATGGAGAGAGAATCTCAAACCATACCCATACTCAATTACTGTCCAACAAACCAAACCCTTCTCAATGAGGCATCTTTCGTTTGTTGGAGGTTGGGTATTGGGTATGGGTATTGTCCAAACCCTTCCAACAAACCCATACCCATACCCAACAAACCAAACTGAAAAAGAACTCCGGTCAAAGACTCTCCCCCACTCAACAACTCCAGTCAAAAAGCTCTTATCATTCATCAAATCAAATAATTCACACTACTATTACTATACCCTAATTCCAATATCAAATCAACAATAATTTTCATTTCAAAATTATTAAAATAAAAAAACCAAACCCAAAAAAAAAAAAATCTCATTTTTTCCTCATTTACCCATTCAAGTTCAACACACTGCAGCTGCTGCACAGCACAGCACACACATTCTCTGGCTTCCATTTCGTCACACCCCATTAACCCATTAAGCAACAAAAAAGTCAAAACTCAAAACCCCAATTTTAAAAATCGAAACTTTATCACCTTACACGGTTTTCCCCATCTCT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	316	507	2.60E-28
PF00069.28	Pkinase	311	560	1.60E-26

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.1:RLK-Pelle_LRR-Xa

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0050832	defense response to fungus	Biological Process
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily

trEMBL

trEMBL term	Description
A0A1S2XHA2	_

SwissProt

SwissProt term	Description
BIR2_ARATH	Inactive LRR receptor-like serine/threonine-protein kinase BIR2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G28450	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0680030684.01.T01	_
Oryza sativa L.	LOC_Os04g41030.1	inactive receptor kinase At1g27190 precursor, putative, expressed
Cucumis sativus L.	Csa018944	_
Glycyrrhiza uralensis Fisch.	Glyur000271s00015169.1	_
Codonopsis lanceolata	Cl_C14482_unscaffolded_00010T	_
Arachis hypogaea L.	AH10G23910.1	Uncharacterized protein like

Expression pattern