Gene detail

Detail information of Am07G001780.1 Annotation

Gene ID	Annotation
Am07G001780.1	galacturonosyltransferase-like 10

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G001780.1	mRNA	Chr07	5971639	5973566	-

Sequences

CDS:

>Am07G001780.1
ATGTTTCTTTCTAGATCAACTCTTTTTGTGGTTATAATATTCTCAACTTCATTGCTTTTCTTTCAAGCCAATGCTATTAGATCTCTTCCAAACAAGATCAAAAGCAATAGCTATGAAAGTGGGGTTATCAAAGTTGATTCCTTTTTGGAATTTAAAGAGGCCCCAGAATACAGAAACCAGCAAAAATGCACTCTAGTTGATCGACACAATGTCCCAATGGAATGTAATCCATCACTTGTTCATATTGCAATGACCATTGATTGGAGTTACTTAAGAGGATCAATGGCTGCAGTTCATTCAGTTCTCAAACACACTTCATGTCCTCAAAATCTGTTCTTTCATTTCATTGCATCAGATTCAAGATTAGAGAACAAAGATGAGTTTACTAAGATTGTTCATAGTTCATTTCCTTCATTGAGATTCAAAGTCTATGTCTTCAATGAAAAACTAGTTGAAAATCTCATTTCTCCTTCAATAAGACAAGCTTTAGAGAATCCCTTGAATTATGCAAGAAGTTACTTAGCTGATTTGCTTGAGGAATGTGTTGAAAGAGTGATTTATTTAGATTCTGATATCATAGTTGTTGATGATATTCAAGAACTTTGGAAAGTTTCATTGAGTGGATCAAGAGTTATCGGTGCTCCTGAATATTGTCATGCAAATTTCACAAGATATTTTTCCTATGAGTTTTGGTCAAGTTCTGAATTCTCTGAAGCCTTTGAAGGAAGAAAAAAGGCTTGTTATTTTAACACTGGTGTGATGGTAATGGATTTGATGAAGTGGAGAGAAGGTGATTACACAAGGAAGATTGAGAAATGGATGGAAATTCAAAAGGAGAGAAGGATTTATAAGTTGGGTTCACTTCCTCCTTTTTTGATGGTTTTTGGTGGTGATGTTGAGGGTATTGAACATAGATGGAATCAACATGGACTTGGTGGGGATAATGTTGTTAATAGTTGTAGGAGTTTGCATCCTGGTCCTGTTAGTTTGTTGCATTGGAGTGGTAAAGGGAAGCCATGGACAAGGCTTGATGCTAAGAGGCCTTGCTCTGTTGACTATTTGTGGGCACCTTATGATCTCTACATACCACATGATCATTCACACCAGAGAATTTCTATTGGCACAACAGTCTCTTCATTTTAG

Protein:

Promoter(3k):

>AM07G001780.1
TGTTTTCACCGTTCATCCCAAAAGCTACCACATGTAAAATCTTCGGATAAAATGCACTTTTAGCCCTTTATGTTTCACCAAATTTTCAGTTTGGTCTTTTATATATTTTGTCTCACTTTGGTCTTTATGTTTCAAATTCGTGTCAAAATAATCTTTTTTGTGACTTTTCGTTCACTAATGTAAACAGATGTCACGTTGACTGTTAACAGGTGACGTGACTTGTTTAGTTGGCATTTGTGACTAGGAAAAAAGTTAAAAGATCAAACTGAAACTTCGGTGAAATATAAAAGACTAAAAGTGCATTTTAGACAAAATCTTCTTAATTACTCATAGGCGTTGTTAACCTCAAAAATTAATACTTACAACTAAAGGTCTGCTTAGTGTTATGCATTAAAGCATCAAAGAGTCTAGTAAACTCAAAAAAGCATGCTTAGTGTTGTGCATCAAAGAATAAAAGAAATCAACTAAACTCAAAATATTACTTACAATTGAAGGCATGTTATGCATCAAAGAAGTCTATTAAAATAAGGCACTCAAACAACATGATTGTGTAAATGGGCAGGTCGTTGTGTAAGGTAAGGCAAGCTTTTGGGCCCCTTCGTTTTTTTTTCCTTTTTGTATATATTAATTAAGGAGTTTACTTGCACTTTTACTTTATTTTCTTGTTGACTTTCTAAACTATCATTTTCATGATAGTTTTCTCCACGTCTTCTCCACGTCTCAATATCATTGACTTGAAAAATTATTTTGCTTACAAATATGTATAACAAACTTATTTTGCCTCATAAAAAATAAGAGTTACCCTCATAAGATAATTTTTTAAATTGAGTATGGAAATTCACAAGAAATAAAAATAAATATAAAAGCGAATAAATTGGTACTAATCTTATCATTTTAGATATGTAATTTGTAAAAAAATTAGGTATTTAGAATTATTCTGTAATGAAATTATGTATTTTATAAAAATTTACAATAATTTTTTGAAAAAAAATATTATAGATTTTTTTCCCCCACTGATAATTTTTTTGGATCCATCACTATATATATGGTCACATGGTCTTTGAAAACCTTGTTCAAATATAACATTCTTGTGCCACTTCTAAAGGTACCAACAACTCACCAAGAGATCATGAAGGTTGTTGGCCAAGGGTTAGAGCACTCTTTATAAATGTACTTATACCGGATTGCTTATAATGAATAGGCTCTTTATATCTTTATAAGTATTTGGTACGACTAGCTTATAGTTTTTTTCACTTTTTTTCGGCAAGCCTTCTTTTAAGCAAAAAGAAGGAAGAAAGTCTCGTTAAAACCTTCTGATGTAAGGCAACATCGAGAAGGATAAAGAGAACAACCCCTTGAATTTATTAAAAAAAGAAAAAAGAAAGATGACAAGAGAGCTCGAGGGGAGCTAGACAGATACCCATGGCAAAAAAGCAAATAAAATCAAAGCAATAATAGGGAGCCCCCTAAGACATTCTATCCTAGCGACAATTGAAAATGGACAAACTTACAATAGTCAGATAAATGAGACAGAGACAGAAGAAATGACAAGTTAGTTTTTTTTTCACTAATTTATAGCATTTTTCACTAGCTTATATAGTTTTTTTTTATATTTATACGCTAGTTCAACTGCTAATTTTACACAACACTTTAAGGCCCTATTTGGCAAAAAAGAGTGGGTAGCAGATAAGCTAGTTTATAGCGGATAACTTATAGCGGATTGAATTTAAAGTATTTGGTAAAATTAATGGTTGAACTAGCTTATAAATATAAAATAACATAAATGAGCATTTTTAATTAATGCTTAAAAATGAGAGAAGATTCATTTAATTGAGGATAAATTAGGAATTTTAATAAATTAAAAAGGAGAAAAATGAGAGAAAAATGAAACGCTATAAGTTATAAGCTCAAACGCTATTTCAATTAACATTTCAAAAAACGCTATAAGCTAGTCATACGAAACACCTACAATGAACTTATCCGCTATAAGCTAGCGGATTGGCTTTGCTAAACAGTACTTAAGTTCAATCTGCTAGCTTATCTGTTATCAATTATTCGTTATCAGTTCATTTGTTATAGGCTAAGTTTATCGGCTATTCATTAACTTATCACCTATCCACAATTTTTTTATCAAACAGCACCTATATCGTAATTTTAATTTTCTATTACACTTTTTTAGATATTATCCTTTCTTTAAGGGTGTGTTTGGGACGGGGGGTTTTGAATGGCTTGATATATATTTTAATATCTATTTGAGATTTTAAAAAACCGAAAGAATAATATGATAAATAATCATAAAACATTGTTAATCATGCTTTATTTTTGTTTAGAAACATTTTATAGTTTCATCAATTTATAATTAAAAATCAACTCGTTCCCTCTTTTTCCCTCCTAAACCCTCCATCCAAAGATACCGTAAGGGATATTTGTCTCCTAAGAAAATTCTGGAATAACATTGAACATACACATGTGTTCGAAGCGTGTTGCCAACCAATGAATTCAAAAATGTTTGCGTGTCTGCACATATATATTCAAAGCACGTGGCCACAATGCTATTTCTGTCTTCAATGGACAATTACCTGAACCTAAACTCGAATCCGAGGTTAATTGAATATTATTATTTATTAATACAATATTTTTCACATTTTTCACCAAAACGAATAATTCAAAAGGCTAAAAGTTACATGAAAGAAAGAAACTCCTAAGAAGTTTCCTAATGGCAACTTTTCAACCATAGCCGCTGAAGTTTCTAACTCAGTCACATGACAATGACATCATAACAAACGCGTTAATTCAATTCTCTATGTTCCATTTGCTCCATTTATATACACTTCACCCATTTCCCTTACTTTCTTGAATCCAAATATCTCTCAAACTATCATATATTCTTTCTTGTTCTTTCAATTCAATTAAACCTGCTGAGATTAATCTTTCTTGTTCTTTCAATTCAATTAAAACCACTGAGATTCGGTCATTGTCGTTTCGATTCGTAAAATAGTG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01501.23	Glyco_transf_8	81	342	1.60E-54
PF18404.4	Glyco_transf_24	172	265	1.60E-08

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT8

Gene Ontology

GO term	Description	Category
GO:0071555	cell wall organization	Biological Process
GO:0016757	glycosyltransferase activity	Molecular Function
GO:0005794	Golgi apparatus	Cellular Component
GO:0006979	response to oxidative stress	Biological Process
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR029044	Nucleotide-diphospho-sugar transferases
IPR002495	Glycosyl transferase, family 8

trEMBL

trEMBL term	Description
A0A8B8LS01	_

SwissProt

SwissProt term	Description
GATLA_ARATH	Probable galacturonosyltransferase-like 10

KEGG

KO	Description	Enzyme
K20893	probable galacturonosyltransferase-like 1	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G28340	galacturonosyltransferase-like 10
Medicago sativa L.	MsG0680030659.01.T01	_
Oryza sativa L.	LOC_Os03g18890.1	glycosyl transferase 8 domain containing protein, putative, expressed
Cucumis sativus L.	Csa003076	_
Glycyrrhiza uralensis Fisch.	Glyur000271s00015156.1	_
Codonopsis lanceolata	Cl_C00134_unscaffolded_00260T	_
Arachis hypogaea L.	AH10G23780.1	Probable galacturonosyltransferase-like 10 like

Expression pattern