Gene detail

Detail information of Am07G001750.1 Annotation

Gene ID	Annotation
Am07G001750.1	golgi alpha-mannosidase II

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G001750.1	mRNA	Chr07	5883198	5889262	-

Sequences

CDS:

>Am07G001750.1
ATGGCCTTTTCATCTCGACGTGGAGGAAACTGGGCACAATCGATTCTTCCATCATCAAATCCTAAATCCAAGATACCCAGAAAGGGAAGAAAGAGAACTTTATTTAAAGATTTCATTTTTAAAAATTTCTTCACAATTGGGTTATTGTTCTCTCTCTTTTTCTTCCTTATAGTTCTTCTCAGATTTGGGGTTCCAAAACCAATATCAACCCACTTCAGAACTCGTTCATCTCGTTTCAGAAAAGCCTTTACAAGGAAACCCCTTTTTGATGAGAGTGGTAATCGAACTATCCTCTTTGGTGGTTCTGCTACTGTTGATATCACCACTAAAGGGTTATATGATAAGATTGAGTTTTTGGATGTTGATGGTGGTGCTTGGAAACAAGGTTGGAGTGTTACTTATAGAGGAAATGAATGGGATAATGAGAAGTTGAAGGTTTTTGTTGTTCCTCATTCACATAATGATCCTGGTTGGAAACTCACTGTTGAGGAATATTATGAAAGACAATCTCGTCATATACTTGATACCATTGTTGAAACTCTAAACAAGGATCCTCGTCGGAAGTTCATATGGGAAGAGATGTCGTACTTAGAGAGATGGTGGAGGGATACCACAGATGAAATGAAGGAATCATTCATCACTTTGGTGAAAAATGGACAGTTAGAAATTGTCGGAGGCGGCTGGGTGATGAATGATGAGGCCAATTCCCATTATTATGCTATAATTGAACAGATAGCAGAAGGAAATATGTGGTTGAATGACACAATTGGGTTTGTTCCTAGAAATTCTTGGGCCATTGATCCGTTTGGTTACTCATCTACCATGGCCTATCTTCTTCGCCGTATGGGTTTTGACAATATGCTTATCCAGAGGACTCATTATGAACTGAAGAAGGAACTTGCATGGCGTAAGAATTTAGAATACATATGGCGACAAAGCTGGGATGCAGAGGAAACCACAGATATATTCGTCCATATGATGCCCTTTTATTCATATGATATACCTCATACATGTGGTCCTGAGCCGGCTATTTGTTGTCAATTTGACTTCGCACGCATGCAAGGTTTTGTTTACGAACAATGCCCGTGGGGACAACATCCTGTCGAGACAACTGAAGACAATGTTCACGAAAGGGCACTTAAATTACTTGATCAATACAGGAAAAAATCTACTTTGTACCGAACAAATACTCTTCTTATTCCACTTGGAGATGATTTCCGCTATATTAATGTCGAAGAAGCAGAAGCGCAGTTCAGAAATTACCAAATGTTGTTTGATTATATCAATTCAAACCCTAGTCTGAATACGGAGGCGAAGTTTGGTACTTTAGAAGACTACTTTGTAACCCTGCGGGAGGAAGCAGAAAGAATAAATTACTCGGTTCCCGGTGAAGTAGGATCTGGTCTAGTTGAAGGTTTTCCTTCCCTCTCTGGTGACTTTTTTACTTATGCCGATCGTCAACAAGATTACTGGAGCGGTTATTATGTTTCACGGCCCTTCTTTAAGGCCGTTGACAGGGTACTAGAGCATACACTTCGTGCGACGGAAATGATGGTAGCTCTAACACTCGGGTGCTGTCGGAGAGCGCATTGTGAGAAGTTTGCAATGGGGTTTTCGTACAAGTTAACTGCTGCTAGAAGAAACTTGGCTCTTTTTCAGCATCACGACGGAGTAACTGGTACTGCAAAAGATCACGTGGTTATGGACTACGGAACTCGAATGCATACCTCGGTACAGGACTTACAGATTTTTATGTCTAAGGCAATCGAGGCACTTCTTGGAATCCGCTATGATAAATTAGATCAAAGTCCTTCGCAGTTCGAGCCAGCGATAACGAGATCTAAATATGACGCTCAGCCATTGCATAAAGTGATCAATACTCGTGACGGTACTTACCAATCGGTGGTCTTTTTTAATCCGTTGGAGCAAACCAGAGAAGAAGTTGTGATGGTTGTTGTTGACCATCCCGACATTACTGTTGTCGACTCTAACATGAGTTGTGTTCAAAGCCAAATCTTTCCTGAGTTGCGGCATCACAATAGCAAGATCTTTACTGGGAAGCATCGGGTTTATTGGACAGTTTCCGTTCCTGCAATGGGGTTAGAAACATATTATATTGCCAAGAGTTTCGTCGGTTGCGAAAAAGCCGTGCCTGCAAAGTTGAAACTTTTCACTAAGTCTAGCTCAGTTACCTGTCCTTCACCATATTCTTGTGAAAAAATAGAAGCTGATGTGGCTGAAATTGAGAATCAGCATCAAAGACTAACTTTCGATGTAAGGTACGGTTTGTTGCAGAAGATAACCTCAAAAAATAGTTCCCCAAAATCAAATATTGTAAATGAGGAAATCGGTATGTATGCTAGCGCGGGTAGTGGGGCGTACTTGTTTAAGCCGAATGGTGAAGCGCAACCGATTATTGAAGGAGACGGGCAGTTGTTGATCTCTGAGGGGCCTTTGATGAAAGAAGTATACTCTTATCCAAAAACAGCTTGGGAGAAATCACCAATTTCTCATAGCACTCGAATATATAGTGGGGAGAGCACGGTTCAAGGATTTGTCGTCGAAAAGGAATATCATGTTGAGCTCATTGACCATCATTTCAATGATAGGGAGTTAATAGTTAGATATAAAACTGATATTGATAACAGAAAGGTTTTTTATTCTGATTTAAATGGATTTCAGATGAGCAGAAGAGAAACTTATGATAAGATTCCTCTACAAGGCAATTACTACCCCATGCCCTCTCTTGCTTTCTTACAAGGATCTGATGGTCGACGGTTTTCCGTCCATTCCAAGCAATCATTAGGAGTTACAAGTCTTAAAAATGGATGGCTAGAGATAATGCTTGATCGCCGTTTGGTAAGAGACGACGGTCGTGGTTTAGGCCAAGGAGTGATGGATAACCGCGTAATGAATGTCGTCTTCCACTTAACCGTCGAAACCAATATTTCCACCACATCAAATCTGGTTTCAACTTCAAGCTCATTGCCTTATACTCCTTCGCTTTTATCTCACCGTGTTGGTTCTCACTTGAACTATCCATTGCATGCATTCATTTCCAAGAAATCTCAAGAAGTGTCTGTGACGCCACCAATCAGATCCTTTTCTCCACTTGCTACTCCTTTTCCATGTGATTTACATGTTGTGAACTTTAAGGTTCCAAAGCCTTTAAAATTCTTGCAGCAACCATCTGAAGGTTCAAGATTCGCTCTGATTTTGCAACGACGACATTGGGATTCTTCGTACTGTCATAAAGGAAGATCACAATGCACAAATGTAGCCAACGACCCCGTGAATCTGTTCAGCATATTCAAAGATATTACTGTCTTGAAGGCTAAAGCAAGTTCATTGAATCTTTTGCATGAAGATCCAGGAGTAATGGGGTTCACAGAACAGTTTGCAGATCTTGCACAAGAGGGGCATGTTGCGATATCTCCAATGGAAATACAAGCTTATCGGTTAGAGTTGCGGCCACAACAACAATAG

Protein:

>Am07G001750.1
MAFSSRRGGNWAQSILPSSNPKSKIPRKGRKRTLFKDFIFKNFFTIGLLFSLFFFLIVLLRFGVPKPISTHFRTRSSRFRKAFTRKPLFDESGNRTILFGGSATVDITTKGLYDKIEFLDVDGGAWKQGWSVTYRGNEWDNEKLKVFVVPHSHNDPGWKLTVEEYYERQSRHILDTIVETLNKDPRRKFIWEEMSYLERWWRDTTDEMKESFITLVKNGQLEIVGGGWVMNDEANSHYYAIIEQIAEGNMWLNDTIGFVPRNSWAIDPFGYSSTMAYLLRRMGFDNMLIQRTHYELKKELAWRKNLEYIWRQSWDAEETTDIFVHMMPFYSYDIPHTCGPEPAICCQFDFARMQGFVYEQCPWGQHPVETTEDNVHERALKLLDQYRKKSTLYRTNTLLIPLGDDFRYINVEEAEAQFRNYQMLFDYINSNPSLNTEAKFGTLEDYFVTLREEAERINYSVPGEVGSGLVEGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEHTLRATEMMVALTLGCCRRAHCEKFAMGFSYKLTAARRNLALFQHHDGVTGTAKDHVVMDYGTRMHTSVQDLQIFMSKAIEALLGIRYDKLDQSPSQFEPAITRSKYDAQPLHKVINTRDGTYQSVVFFNPLEQTREEVVMVVVDHPDITVVDSNMSCVQSQIFPELRHHNSKIFTGKHRVYWTVSVPAMGLETYYIAKSFVGCEKAVPAKLKLFTKSSSVTCPSPYSCEKIEADVAEIENQHQRLTFDVRYGLLQKITSKNSSPKSNIVNEEIGMYASAGSGAYLFKPNGEAQPIIEGDGQLLISEGPLMKEVYSYPKTAWEKSPISHSTRIYSGESTVQGFVVEKEYHVELIDHHFNDRELIVRYKTDIDNRKVFYSDLNGFQMSRRETYDKIPLQGNYYPMPSLAFLQGSDGRRFSVHSKQSLGVTSLKNGWLEIMLDRRLVRDDGRGLGQGVMDNRVMNVVFHLTVETNISTTSNLVSTSSSLPYTPSLLSHRVGSHLNYPLHAFISKKSQEVSVTPPIRSFSPLATPFPCDLHVVNFKVPKPLKFLQQPSEGSRFALILQRRHWDSSYCHKGRSQCTNVANDPVNLFSIFKDITVLKAKASSLNLLHEDPGVMGFTEQFADLAQEGHVAISPMEIQAYRLELRPQQQ*

Promoter(3k):

>AM07G001750.1
TTTTAAAGAATTTGTTGAAAATATGTTTAACGGAAATCCCCCCCTTCAAAGGAGTTGCTTTGCTCTTACTTTGATCTATGAATTTGGGTTGTGAACCTTATTTTCGAACTTGTACTTTCTATTAAATGTTTTGATTAAGGTTAATCAAAGTTGGGGTGTGAACCAAACTGTTTGCAGTAATAATTCTGGAGGTACCATTCTGACACAAACTGAAGAGATTTTTTATTCTCAAAATAGATAAATTTGTCTCTTACCTTTATGATTGTTTAACAACTAATGATTTTGAACCCAAAACTACTGGTTAGAATGTCCGTGATGTGTCAGAATGATAAGAGGATCCTCCCATTTACCAATGTTCTAAAAAGTACTATGTACTTAGCCTTTCGACCAATTTTTCGTTAATTTTTTTTTTCATGAGATTTTGCGGCTGAAATGTTCTATGGTGTAATAGATGGAACTTGAACAATTTTTGAGGACAAAAAATTTCAAGTTGGGGTGTATTGTAACATCCCCAAATTAATTGTTTCAATTATTTTAATTGATTGTTTTTAATTATATGGGTTAGTATATAATTGTAGTTGTAAGTTGTTAAGTGAGTCGATGATCGATGGTCAAATTTGCTTAAATGTGACATTTGTGTGAAATTGAGTACTAAATAGTAATTTAGTAGTTGATTTTAAGTTGGAGGTTATTAAATTATTTAATTGTTTGTGATGGAGTGTGCTTGATAATTCCATGAAGCGATAGCTTGAATGTGAAACTTATATGCATTGAGTGTATTTTGTGTTGGTTGCTAATTTAATTAATTGAGGGAATTGGGGCCTCATAGAAATAGAGGAAGAGTTTAAGGGTATTTTAGGAATTTTCCATACCCAACGCTCACTAATTTACACACACACACATTTAGCTGACCATTAAACTAAAACACACCAACTCTCACACCCACACACTTATCATTTTAAACAAAATAGAAACAACACTCCCTCACTTCGTGAGAGAGAGTTTCGAAGAAAGAGAGAAGGGAAAGGGAAGAACACTCAAACCCTCACCTCACCCACAAAGCCACATCTGAAAAAATTTACTCTCCACCCTTCTCCTCTTGTTCACTTCATCGTGTTTGAAAAATTGAGAGCTCAAGAACTCAGCTAGTTCAGTTTCTTCCACTCCCTCCCTTCCTTCTCATTTTCGAAATACCCTTTTTACTTGGGGTGGATTAAGTTGAAATTTCTGAATTGCATGTCACCGTAGGAGGTTTCTAAGTGCAATTTAGAAGCTACATTGTGGATTGAAAGATGAATCACTCAAATAGGAAGTTTAAGGGCTGAGTTCGAAGTTGAAGTCATTGGGATTGTTGGTGTCTAGCCATTTTCAATTTTGGGGTTTCTAGAGCATATTTTGAGACAATCTCTTCATCATCCAGCTTGTGTTGTGATTTTCATCACATTCAAGGTGAGTTCCTCACTTATTTTGTGTCTTTATGAAAATGCATGTTGATTTGATTGCAAGGATTCTGAAGTTAGTGACTTGCATGCACTGAAATTCTGTTTTCAAACCGTTTTCTAAAAAATTGCGTATTTATGTTGTTGATTGGGAACTCATGTGATTGTTAATGATTGATGCATTTGTTGATATAATTGTGTTTGTGACTGGAAATATGACTGCTATGATGAGGCATTGGGCTGAATTTAGTGTTGGGGACGAATCAGAACCGAAAAGGGCGAGGAAACGATTCGAAAAACACTATTTTTGTGGTGCTAAGAAACTGGCACGGACCGTGCCACCATCTGGTCTCCTCCCTTAAAAATTTTTTTTCCTCTTCCTTTTGAACTCCAATTCTTTCCCAATGCTAACCCTAACCCTAATGAAGTATTAATGAATGAATGTGACTCGATTTTGACATGTTTTAAAGCTCAAAAACATTTTATTTACTTCGGCTATTATTGTCAACAAACGAGGAAAGAAACGAATAAACTAAAAGGTATAAAAAATTCGAGGGGGATAAATGGGCTTTATCCGAATCCATTTTGCCAACTCTAACTCCATTAACAAACTAATAATAACATGACTCAACATCAAATTGGCACTCAAACACTAAACTTTACTATATAAAAAAGTATCACATTTTCTATTACTTTTTTGACTTTTTTTACCCACTCTTAGACCCTGTACCCCCATAACTCATTTTATCCCCAAAAGACCCTTTACATTTTTAACAAAATTTAACCGGAATGAAAAATGTTGTTTGAGAACTTTTTAAAAAAATTGACTTTTACCTACGGTTTCTGTCAGTAGGTAAAAGGTTTTCATTAAAAAAATGGTTTTTTAACTACGTTTTCTCTCCGTAGGTAAAAGTCATTTTTTTAAAAAAACTTTCTGAAATTATGTTTTGCTAGGTAAATCCGGAAAAAATCAAAAAATGAGTTCCGGAATTACGTGTTAAAAGGTAATTCCAGAAATATCAAAAAAATACGTTCCAAAATTATCTCTTAATAGGTAATTCCGGAAATTTGTTGAGGAGTTACGGGTAAAATTTGTATAAAATTTGTAGTTTGGTCAAATTTGGGGGCTATAGAGTATATGAGGGAGGGTAAAAAAAAAAGCCTCCTTTTTTTCACCTTATTTTCATTTTATTTTCTTTCCTCTCACACTTCCACCCATAATAACCAAACAAAGTGTTTATCCTGCATACTTTTCCATGTCTTATTAGTGAAGAAAAATGTTCCTCTCGACAAACACCCACAGCACTCAGTCTTCAACACACTGCATTGACAATTCAAAAGCCCCAAAAATCACACCACACCATAGATGCTTCTCAACACACTCCCCATGATCGATTCCATCACCAAGACTTGATTTTGAAGACTCCAATCAACTACCTTCACAGTTTCAGAAAATGGGTTTCGCTTTTCTTCAATATTTCTCTCACCTTCCCCCACCATAGATCCCACTAAAAAAATCACTTTTTTTTTTCAACCCCAATTATAGAGATAGAAGAAGATC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01074.25	Glyco_hydro_38N	145	484	4.40E-103
PF07748.16	Glyco_hydro_38C	748	959	3.80E-37
PF09261.14	Alpha-mann_mid	490	592	2.00E-22

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH38

Gene Ontology

GO term	Description	Category
GO:0006491	N-glycan processing	Biological Process
GO:0030246	carbohydrate binding	Molecular Function
GO:0046872	metal ion binding	Molecular Function
GO:0042538	hyperosmotic salinity response	Biological Process
GO:0006487	protein N-linked glycosylation	Biological Process

InterPro

InterPro term	Description
IPR013780	Glycosyl hydrolase, all-beta
IPR011682	Glycosyl hydrolase family 38, C-terminal
IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR000602	Glycoside hydrolase family 38, N-terminal domain
IPR037094	Glycoside hydrolase family 38, central domain superfamily
IPR015341	Glycoside hydrolase family 38, central domain
IPR028995	Glycoside hydrolase families 57/38, central domain superfamily
IPR027291	Glycoside hydrolase 38, N-terminal domain superfamily
IPR011013	Galactose mutarotase-like domain superfamily

trEMBL

trEMBL term	Description
A0A1S2XH91	_

SwissProt

SwissProt term	Description
GMAN2_ARATH	Alpha-mannosidase 2

KEGG

KO	Description	Enzyme
K01231	alpha-mannosidase II	[EC: 3.2.1.114]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G14950	golgi alpha-mannosidase II
Medicago sativa L.	MsG0880045616.01.T01	_
Oryza sativa L.	LOC_Os06g13650.2	alpha-mannosidase 2, putative, expressed
Cucumis sativus L.	Csa017411	_
Glycyrrhiza uralensis Fisch.	Glyur000271s00015154.1	_
Codonopsis lanceolata	Cl_chr03_18230T	_
Arachis hypogaea L.	AH10G23720.1	Alpha-mannosidase 2 like

Expression pattern