Gene detail

Detail information of Am07G001490.1 Annotation

Gene ID	Annotation
Am07G001490.1	BAH domain ;TFIIS helical bundle-like domain

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G001490.1	mRNA	Chr07	5179555	5186885	-

Sequences

CDS:

>Am07G001490.1
ATGCATGGGTTCGGTGGTGGTGAGGAGTGGAAAAACAACCGGCACATGTGGCCTGTCAACGCGACCACTGTAGCCTCCGATTCTTCACCGTCTCAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTTTTCAAACCACCCCAGGACTCCCCACCTTTTATTGGAATAATTCGCAAGTTAACATTTGATAAAGAAGAAAGTTTAGTAGTGAATTGGTTTTACAGACCTGCTGATCTGAAGCTAGCTAAAGGGATTGTACTGGAAGCTGCACCGAACGAAGTCTTTTACTCCTTTCACAAGGATGAAATACATGCTGCATCGTTACTCCATCCTTGTAAAGTCGCATTTCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGGGTGTATGACATTGAGAACAACTGTTTACGGTGGCTAACTGATAAGGACTATATTAATGATAAGCAGCAAGAAGTTGACCTGTTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAACCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACATCAGCACAGTCATTGAAATCTGGTTCCGATAACATTCAAAGTAGTTCTTCCTTTGGAGTGCAGGGTAGGGGAAAAAAGAGAGAACGAGGTGATCAAGGATCTGACTCGTCTAAAAAAGAGAGATTGTTTAAGGTAGAAGATGGAGATTCTGGTCAATTTAGATCAGAGAGCATGTTAAAGTCTGAGATTGCTAGAATCACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAAATTGGTGCAGCTCATGCAACCTGATAGTGCTGATAAAAAGATAGATTTGGCAGGGAGGATAATGCTTGTTGACGTAATATCACTTACAGACCGGTATGACTGTCTTGGCTGGTTTGTGCAGCTCAGGGGTTTGCCGGTGTTAGATGAATGGCTGCAAGAGGTCCATAATAAGGGCAAAAATGGTGATGGTAATGTGCTTAAAGAAGGCGATAAATCTGTTGAAGAATTTTTGTTTGCTTTACTTCATGCATTGGATAAACTTCCTGTGAACCTTCATGCACTACAGACCTGTAATGTTGGTAAGTCTGTTAATCATTTGCGCGGCCACAAAAATACTGAAATTCAGAAGAAAGCCAGGAGTTTGGTAGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATGACTGATTCCAAATCTGGTTCAACTCGTGCTGTTTCTTGGCCTTCAAAACCAACATCTTCTGAGGTTTCTCACCTTGGAAATAGGAAAACTGGAGGCTCTGATAATGTTTCAAAGAGCTCTGCTATTCAACCATCAGTAACTAAAAATTCTCAATCTAAACTTGGTTCTGGGGAAGCACTATCCAAGTCCTCTTCATCACCTGGCTCAACTAAATCAATGACTGCCTCAGGAGGCAGTAACGCAAAAGATCAAAATGTTAAAGTCATGGCTGGAGCGTCAACATCAGATCTACCTCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAACAACAGCATATCTTGTTCTAGTGAACACGCAAAGACTATTGGTTCTTGTCGGGAAGATGCAAAAAGCTCCACTGCGATGTCAGTGAGTGTGAGCAAAATACCTGGTGGATCATCTCGAACTCGGAAGTCAAGTAATGGTGTACATGGAGCTGGTGTTGCTGTACTTCAGAAGGAACATGGCTCTGCCAAATGTTCAACAAGAAACTCACCTTCCGAAAAAGTTTCACCAAGTCAAGCGTCCCATGAAAAATCACCTGATCAGCCCCTCACCGATCAAGGGAGTAATCAGCGACTGATTCTCAGACTGCCAAACACTGGTCGCAGTCCTTCAAGGGGAGCTAGCGGGGGCTCCTTGGAAGAACCTGCCATTACATGTGGCAAAACATCACCTACTGATAAGAATGAGAATCAGGATAGGAGGGTTAAACCTAAAAGTGATTGTTTACCGACTCATATTGTGTCAAATGTGATAAATGAAGCAAGTGATGCTAATGAAATGACTGGTTGTGTTGAAGCCAAGGGCTCTATGCAGGTATATGAAAAGTGCAGGGCTGTTGGAGAGGGTGAAACAGTAGAAGCGTCAAAACCAACTAGTTCATCATCTGGATTTGCTTCCAGATCAGGGAAGACTTATGATGCTTCTATAAGCCCCATGAATGCATTAGTTGAAAGCTGTGTGCAAATTTCTGAAGCAAGTGCCTCTGTGTCCCCTGGAGAGCATGGGATGAATCTGCTTGCCACTGTGGCTGCAGGTGAAATATCCAGATCTGAAAATGTCTCACCTCGGGTGTCACCTGAGAGGAAGTTTCCTGCAGCTGATGAATCAAGCTCAGGGAACGATTCCAAGTTAACACATTCTGTCGAAGCAGCTGCCGGCACTCATGAACAGTCTAATGGTGGGGCTGCTGTTGAGCAACTTCAGTTCAAAAATGATTCAAGGCATCCCGTTACAACATCACATGATTTTTCAGGTGATGGTGAAGCCATTTCATCCAGTCGTATAGAGAAAAATGGTGATGGCAGAACTCAAATTAATTTCTCTACTGGAGATGTGTTGCAGAATTCTGAAGGTCTATGCTTACGGCCTGAAATCAAAGAGGATGCTTCAGAAACTGGTTTGCCAGCTAAAAATGAGACTCGTGCAGAAGCTGGAGAAGCAGGCCATTTCCAGGAGCAGAGGGAATTGGGAAGTCAATGGACTAATAACAGCAGTTGTTCAAACACTAAATTAAGGTCGAGGACTTCCTCTTTTGATGATAATCTGAAGGTTGATCACCTGAATGAGGGTATCACAGAGCATGCGAAGATGTTGGTTTCAAAAACTGTTGCTAGTATTATGATTGAAAATGAGCAAGGTAAAAAATCACCCGAGTTATCTTCAGGTGTAGATAATGAGAACCAGGCTGGTGCCGAGAAAGTGACTGGTATGGGTGTGCCTGTGCAAAATAGCTCTCTAGTTGCGGATAACTGTGAGTCCAAAGATTTTAAAAAGGAAAATGTTTCTGGTAATGCTTTGACAGTATCCAGGGATGGAAAGGCTGATGGTGTGGAGGCAGGGGAGATCGTGACAGATAAGAAACAAATGGATTTGGATTTAGCTGTTGCAGATGGTGTTGTAGAACAAGCAGAAGGGAATTGTGGTAGAAAAGAGGTTGTGGGTCATGGTTCTGGCTCATCAGCTCACTCAGATTTACCAACTCTTTCCGAGAAAGACAACGAAGCGCCAAAATCATGTGAGTCCTACCCTGATGGAAATAAAGCTGAGGTTGCATGTAATGTTAATCCATCACCTACTGCTGCTGGGTCTGATGCAGCAGTAAGACTGGATTTTGATTTAAATGAAGGGTATCCTGCTGAAGATGCTGGCCAAGGGGAGATTGTCAGACAGGAAGAACCCCCAACTTCATCTGCTGTTCATGTTCCTTGTCCTTTGCCTTTTCCCATTTCGTCCATCTCTGGGGCATTCCATTCTTCAGTTACAGTAGCATCTGCTGCCAAAGGGCCAGTTGTTCCACCAGAAAACCCATTGCGGAGTAAAGGGGAGCTTGGCTGGAAAGGGTCAGCTGCCACAAGTGCATTCAGGCCTGCAGAACCTAGGAAAAATTCTGAGATGCCATCAAATACTAGTGATATTTCTGCTGCTGATGCTACTTTGATCAGAAGTCGGCCTCCTTTAGATTTTGATTTGAATGTGCCAGATGAAAGAAGTTTTGAGGATGTTGTGTCCAGGGGTTTCTTAGATTCTCGACCACAGGATCGGAACACTGTTGGTCTTGATCTTGATTTAAACAGGGTAGATGAGACTGCTGAAGCTGGACCTTTCACTTTGGGTAAATTGGATATTCCTTCTTTGCCGAGTAAACCTTCGTTGTCCAATAACAGTGGAAGTGTCTCGAGAGATTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTAGCATTGAAGTTCCACCTCGTACTCATCAGATGAAAAGTACCATGCCATTTTCAACTTCTGTTCATGGCTCCAGAGCAAATAATGCTGAATTTGGGAATTACTCTTCATGGTTCCCTCCAGGTAATGCATATTCTGCAATTACTGTCCCACCACTAATGCCTGGTAGAGGGGAGCAAAGTTATGTTGGCGGTTCTGGAGCACAGCGGATCATAGGTCCCACAGGTAGCACACCTTTTGGTACTGAAATTTACCGGGGGCCAGTGCTTTCATCTTCTCCAGCTGTTGCTTACCCCCCTACTACACCCTTTCCATATCCAGGATTTCCATTTGAAACCAATTTTCCATTATCTTCAAACTCCTTTTCTGGTTGCTCAACCGCATTTATAGATTCATCAACTGCGGGCGGACTTTGCTTTCCTACAATGCCCTCACAGCCGGTTGGGCCCGGTGGTGTTGTCTCATCCACATATCCCCGTCCCTATGTTATGAGTCTTCCAGGAAGTACAAGTAATGTAATTCCAGACGGCAGAAAATGGGGAAGTCAAAGTTTAGATCTTAATTCAGGCCCTGGTGGTACAGATGCTGACCGCAGAGATGATAGATTGCCACCAGGATTGAGGCAGATGCCTCTTCCCAATTCACAAGCTGCCTTAGTGGAAGATCACTTAAAGATGTTTCAAATGGCAGGTGCTTTAAAGAGAAAAGAGCCTGATGGCGGTTGGGATGGAACTGATAGATTCAGTTACAAACATCCCTCATGGCAATAG

Protein:

>Am07G001490.1
MHGFGGGEEWKNNRHMWPVNATTVASDSSPSQFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLTFDKEESLVVNWFYRPADLKLAKGIVLEAAPNEVFYSFHKDEIHAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLRWLTDKDYINDKQQEVDLLLDKTKLEMHGAVQPGGRSPKPLNGPTSAQSLKSGSDNIQSSSSFGVQGRGKKRERGDQGSDSSKKERLFKVEDGDSGQFRSESMLKSEIARITDKGGLVDFEGVEKLVQLMQPDSADKKIDLAGRIMLVDVISLTDRYDCLGWFVQLRGLPVLDEWLQEVHNKGKNGDGNVLKEGDKSVEEFLFALLHALDKLPVNLHALQTCNVGKSVNHLRGHKNTEIQKKARSLVDTWKKRVEAEMNMTDSKSGSTRAVSWPSKPTSSEVSHLGNRKTGGSDNVSKSSAIQPSVTKNSQSKLGSGEALSKSSSSPGSTKSMTASGGSNAKDQNVKVMAGASTSDLPLTPIKEERSSSSSQSQNNSISCSSEHAKTIGSCREDAKSSTAMSVSVSKIPGGSSRTRKSSNGVHGAGVAVLQKEHGSAKCSTRNSPSEKVSPSQASHEKSPDQPLTDQGSNQRLILRLPNTGRSPSRGASGGSLEEPAITCGKTSPTDKNENQDRRVKPKSDCLPTHIVSNVINEASDANEMTGCVEAKGSMQVYEKCRAVGEGETVEASKPTSSSSGFASRSGKTYDASISPMNALVESCVQISEASASVSPGEHGMNLLATVAAGEISRSENVSPRVSPERKFPAADESSSGNDSKLTHSVEAAAGTHEQSNGGAAVEQLQFKNDSRHPVTTSHDFSGDGEAISSSRIEKNGDGRTQINFSTGDVLQNSEGLCLRPEIKEDASETGLPAKNETRAEAGEAGHFQEQRELGSQWTNNSSCSNTKLRSRTSSFDDNLKVDHLNEGITEHAKMLVSKTVASIMIENEQGKKSPELSSGVDNENQAGAEKVTGMGVPVQNSSLVADNCESKDFKKENVSGNALTVSRDGKADGVEAGEIVTDKKQMDLDLAVADGVVEQAEGNCGRKEVVGHGSGSSAHSDLPTLSEKDNEAPKSCESYPDGNKAEVACNVNPSPTAAGSDAAVRLDFDLNEGYPAEDAGQGEIVRQEEPPTSSAVHVPCPLPFPISSISGAFHSSVTVASAAKGPVVPPENPLRSKGELGWKGSAATSAFRPAEPRKNSEMPSNTSDISAADATLIRSRPPLDFDLNVPDERSFEDVVSRGFLDSRPQDRNTVGLDLDLNRVDETAEAGPFTLGKLDIPSLPSKPSLSNNSGSVSRDFDLNNGPGLDEVSIEVPPRTHQMKSTMPFSTSVHGSRANNAEFGNYSSWFPPGNAYSAITVPPLMPGRGEQSYVGGSGAQRIIGPTGSTPFGTEIYRGPVLSSSPAVAYPPTTPFPYPGFPFETNFPLSSNSFSGCSTAFIDSSTAGGLCFPTMPSQPVGPGGVVSSTYPRPYVMSLPGSTSNVIPDGRKWGSQSLDLNSGPGGTDADRRDDRLPPGLRQMPLPNSQAALVEDHLKMFQMAGALKRKEPDGGWDGTDRFSYKHPSWQ*

Promoter(3k):

>AM07G001490.1
TTAGCTGCAAAAATCATTTGACAGTGACACTGTTATTTATCCTCACAAGCATCATGAAAAACATAAACAACAGTGAAAAACTATTTATAATGATTCAAGCCAAGCAGAAGCAGGAAACCTGGATCTTGGATCGATGATTTCTTGCAAAATCAATGGGAATGATCCATGTATTCTTGCAGAAGCAATAATATTAAATCAAACTAGGATAAAAGAGAACACAAGAAAATAATAAGACAACAACAAAGAACCTGCAGCAATAATACTAAATCAAACTAGGATTAGAGAGAACACAAAAAATAATAAGACAACAGCAAAGAACCTGCAGCAGCAATATTTCTAAATCAAACTAGGTTCAAGCTTGTAGGTATATCTTGGTTCAATAAAAGATCCTGCAGCAGCAAGACCTAACATTTTAATCTACGAAAGAACAAAATCAATGTAGCAAAACAAGATTCACAATCTTTAAGCTGGGAAACACGAACAAAAACTTGGGATTCCCAATCTCACAGAGCTTGTATTCTTTTTAAATAATCATACGAGCAAGATTTGATTAACATGAGTTACACATAAATAATTGGTACACATTGCATAAAAGGAGAAGAATCGAAATAGAAAACTTACACGAACCTTACCGGAGAGCAAGGTTGTAGAGGGCGACAGAGAGCGATGTCGTAACGAAATATGGAGAGCAGGTCGAACAGAGCGAGGGAGAGCAGGACGACCATCGATGGAGAATACGTTGCAGAGAGAGCGAGGTCGCATAGAGAGAGCGAGCAACTCTGTTGCAAGCAGTGGAGAGAGTAGGTTGTAGGGAGAGTGATGAAGGGAAACCAATTTTGAACAAAAACAAAAAAAGGGTTTTGAGTCTGAGAGGGAACAAAAAGGCTCCACCGAAAAAAATGAGAGAAATTAGAGGGGGTTTTAAAACCCCTTTATTTTTTTTTGAATATAATAGGGCTCAAAGGCCCGAAACGAAAACCACGAGTCACACGGAAACTAATCTAGGAGTAGAAACTCCAATACAATCATCATGCAAAAATTGTAAAATGCGCTCCGGAGGGTGCTCCCAAAAGTGCATGCCTTCCCCACCTTCACACGCAATAGATGCCAGACCATCGGCCACCATGTTGGCCTCCCGATAAATATGCAGGATCTTGACTTGCCACTGACGCTGCAACATCTGCTGGATGCGATGTACCAGCCCCCTACCCATCATTGTCCCGGAACCATTGCCAGTCAATTGAGAAACCACCACCTTAGAATCCAATTGAAGCTCAACGTGCATGTATCCTTTGGTCCAAGCCAACAGCAACCCTTCTAAGCCCCCGCAAAGCTCCACAATATAGGCGTGAGTCTCGCCTATGAACCGCGTAAAACCCCTTTAGATCGAATGAAAATTTGTGCAGGCAGTGTCATTTTATAATTATTTTGGGGAGGTTTTAAAAACCTCCGCAAATAACCCCCTCAATATGATTGTTTTTTTGTAGTGTATAAGTAGAAAGAAAGATATCGTTAACACTTATGACTACAAAGATAAATTCTCACGTTGTAGTAAATATAGTTAACTTGAGAGACTTCTCACTATGAGTTCTTTCAACTTTTGGCTGAAAAGAGCATTGCTCTATTCACTTGCATGATTGGCAAGTTCATTTAATCATACTGGGACAGTTTATATCACCTAACTGCCTCCCTTCCCCTATAAATAGAAAGAAAGATATCGTTAAACTGATGACTACAAAGATAGATTCTCATGGTGTAGTAAATATAGTGAACTTGAGAGACTTCTCACTATGAGTTCTTTCAACCGTTACTCGAAAAGAGTATTGTTGTTATTCACTCGCATGACTGGCAAGTTCAATTAACATACATGTATTAAATATTGTTATTTCAACCATTGCTCAAAAAGAGTATCGCTCTTATGTACTTGCATGATTGGCAAGTTCATTCAACACACGTGTATTGAATGTTTGGTTTTGCAGCAAATTATCTTGTTGACGCCGAAGCTCCATTATGTAGCTTCAAAAGTTGCAGCAACCAACTTACGAGACTTTTGATTGAAGATGCAACCGTGAATCCAAACATACAAGTAATGTGCACCCAACCTAAGTCATTCGAGGAGATTCTCGTGCACTGTTTTAAGTATACCGTTCCCATGAACTATCATTTAATAAATGTTAATTAAAAAAGAAACAACATATATAAAATCATAAATCACCTTCTTATTCAATAATAATCCTATTCAATAATAATAAAGAGTCAAATTTATTACGCAACACGTTTGATAGAAGTGGCTGGCTAGCATTATATCACTATATAAATTGAATAATTATAACAGTTAAATAGTAATGACATTACATAATTATTACACAAAGTGTTACATGGTCAAGAAAAAATCAAGGTTCCCCATGTCATACGGAGTTTAGAGAAGCACAAAACGTCGTCGTTGAGCAGGCCACTCCAAAAAAAAAGTTGAAATAAAAAAAAAAACTGAAAAATTTTCTTACAAAAAATTTCTCTCTCAAAATCTCGGCGTTTCGCGTGAGGCAAGCCCATCGTCCTCTATTTGTTTCTCTCTCTTCTATCTTTCTTCGTTTCTCTCTCATCTTCGCGATTCCTTCGCAGAAAATCTCTCTGGATTTTCTCTATTTCAAGAACAACGATCAATTAATCGATCTCGAATCGAATCGATGAAACAACGAGAATCAGAAGAAACTTTTCCTTCCTCTACGCGCCTATAATTCGGAGAGAAAATCTCTTTCCCTCTTTTTTCGCCACCTAAGCCCTAGAAAACCTATAATCCTTACTTCATATGCTTCTTTCGATCAATTGTTTCATTCTTACAAACCATGACTTATTCGAGGAGGAGATCTAGCTTGATCTAGGGTTTCTTCCTCTTTATTTATAAATTCTAATCTAGGGTTTCGAGTTGCGGGAATTCGATTTCGAATTGATGTTTCTTTTTAGGGACGAAGGTGGGATCGATTTGGAAGATGGTGGATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF08711.14	Med26	353	402	1.60E-11
PF01426.21	BAH	40	145	2.80E-09

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0016740	transferase activity	Molecular Function
GO:0003677	DNA binding	Molecular Function
GO:0005840	ribosome	Cellular Component

InterPro

InterPro term	Description
IPR017923	Transcription factor IIS, N-terminal
IPR003617	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR035441	TFIIS/LEDGF domain superfamily
IPR043151	Bromo adjacent homology (BAH) domain superfamily
IPR001025	Bromo adjacent homology (BAH) domain

trEMBL

trEMBL term	Description
A0A8B8LSP9	_

SwissProt

SwissProt term	Description
AIPP3_ARATH	ASI1-immunoprecipitated protein 3

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G48050	BAH domain ;TFIIS helical bundle-like domain
Medicago sativa L.	MsG0680030619.01.T01	_
Oryza sativa L.	LOC_Os02g50840.2	BAH domain containing protein, putative, expressed
Cucumis sativus L.	Csa017417	_
Glycyrrhiza uralensis Fisch.	Glyur000330s00019533.1	_
Codonopsis lanceolata	Cl_chr03_18770T	_
Arachis hypogaea L.	AH15G22550.1	uncharacterized protein LOC101491495 isoform X1 like

Expression pattern