Gene detail

Detail information of Am07G000850.1 Annotation

Gene ID	Annotation
Am07G000850.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G000850.1	mRNA	Chr07	2714926	2720323	+

Sequences

CDS:

>Am07G000850.1
ATGGCGAAAACATATGCGGCAGGTTTATTATCAGCCATAGCCGCCACAGCATCTGGTTTATCTCAAAATGCTTTTTCCGATACCTCCATTCCTTCTTCTTCTTCGAATGCTGCTTCAGAAACTCAACCACCGTCTCAAAAAGTGCGAAACGATCATCCAAGAACAACTTCTGCTGGTTTCGATCCAGAAGCTCTCGAAAGAGGTTCTAAGGCTCTCAAGGAAATTGCTGCTTCTGGGAACGCCAAAAAGATATTTGAAAACCTAAAAAAACAAGAGGAGACAAAGCAAGCGGAATTTGCTGCAAAAGCTGCTGAGTTTCATCAATTGAAAGCACAACAAGAGACTGAAAGACAAAGGATTCTATACGATGAACAAAAAAAGCTGGCCCAGCATCAGGCACAAACAAAATCCCAGATGGCAAAATATGAGGATGAGTTGGCAAGGAAGAGGATGCAGGCAGAAAATGAATACAATAGAACGAGGAACGAAGAGCTGGTCAAACTACAAGAAGAGTCATCAATCAGACTGGAGCAAGCTCGACGTGCAACAGAAGAGCAGATTCAAGCACAACGAAGGCAAACTGAAAGAGAGAAGGCTGATATTGAGCATGAAACAATCAGAGTAAGGGCTATGGCAGAAGCGGAAGCAAGAGCCCATGAAGCAAAGCTAGCTGAAGATGTTAACAGGCGAATACTAATTGACCGTGCTAATGCAGAGCGAGAAAAATGGCTTGCTGCCATAAATACTACATTTGACCATATTGGAGGGGGCTTTAAAGCCATTCTAACAGATCAAAATAAGTTGGTGGTAGCAGTTGGTGGAGTGACTGCTCTGGCAGCAGGGATCTACACAACAAGGGAAGGTGCACGAGTTGTTTGGGGATATGTTGACAGAATATTAGGACAACCATCATTGATCCGAGAGTCCTCCAGAGGGAAATATCCTTGGTCTGGCGCGTTTTCTCGTGCCATGAGTTCCTTGTCTAGACGTACTGATTCAAAATCTGCATCCAAAAATGGAAATGGTTTTGGTGATGTAGTTTTGCATCCTTCTCTTCATAAAAGAATTGAGCAGCTGGCATCAGCAACTGCAAATACAAAAGCACATCAGGCACCATTCAGAAACATGCTTTTTTACGGCCCTCCGGGAACAGGAAAGACAATGGCTGCCAGAGAGTTGGCTCGGAAATCTGGATTAGATTATGCATTGATGACTGGGGGAGATGTTGCTCCTCTTGGATCACAGGCTGTAACAAAAATACACCAGTTGTTTGATTGGGCCAAGAAGTCAAGAAGAGGCTTGTTGCTTTTCATTGATGAAGCCGATGCATTTCTATGCGAGCGAAACAAAACGTATATGAGTGAAGCACAAAGAAGTGCATTAAATGCCATTCTCTTCCGTACCGGTGATCAGTCTAAAGACATAGTCCTTGCCCTCGCTACAAATCGTCCTGGCGACCTTGATTCAGCAGTGGCAGACCGTATTGATGAAGTCCTGGAATTTCCCTTGCCAGGGGAAGAGGAACGCTTCAAACTTCTTAAGCTTTACCTTGACAAGTACATTGCCCAATCTGGATCAAGAAAATCTGGTTTATTTTTCAAAGGAAACCCACAAAAGATAGAGATTAAGGGATTGACTGATGATATCATAAAGGAAGCTGCTGCTAAAACTGACGGATTTTCCGGAAGGGAGATAGCGAAACTGATGGCAAGTGTCCAAGCTGCTGTCTATGGAAGCGATAACTGTGTGCTCGACCCAAGCTTGTTCCGTGAAGTTGTAGATTATAAAGTTGCTGAACATCAACAGAGAATAAAATTGGCTGGTGCTGATAAATCTAGCTAG

Protein:

Promoter(3k):

>AM07G000850.1
AATTGAATTTAAATATTCAAATTATGCAAATAATGAAATCCATCTAACACATATGGAAATAATTTTTGACATTCTGATTCACAATTAAACATTATCTTAACCTGTCAAATTAGTTACAATTTTCGAATTTCAAGTGGCAAAGATTTCCCACCACAATGAAATGAAATTACTTCTATAAATTTTGGTCATTTCAATGAGTATTTCTAAGTGGTAATTTTTTGACCACATAAATAAGGACAAGGGCTGAATATAATATTTTTTAAGTGGTACTTTTTTGACCACGTAAATAATGAATCTTTTTGAGTCACATATTATTGGCATCTTCTTACATATGCAATAGAGTGATATTCAATTTGCCCACAAAACCAAAGAAACCTTTTTTTGACGTAAAAAAAAAGACCTTTTGAATTTTTGAATGAGAGAGAACAATGGTACTAAAAAATGTAAGGCTAAGCAAGTGGCGGCAACTCCGTAGTTGATACCACCCGTCTCATTCTATAATCCTTCTCCTTAGTATTCCTCCTGTTACCATTCCTTTTTTGGTGTGTCGCAAAGATGAGTGTTGATGAGTTTAGGGATTATAGTTCTGAGCTGTGAGAGGAAGACAACCTAAAATACTAACACATCAAGGTTTGCGCCTTGAAATGGAGGGTGAAGCCTTTCACGATCTCCACCTTCATGTGCACCCACGCAGAAGATGAAAACCTATAAACTTAATCTCGCCATGAGAAATGGGAATGGTTCAATTCCCATTTACATGTAGCTTTTGTTTTATTTTCTTCTACAATAGTTGTTGCACCGGTTAGGTAAGAATAAATGAGTATATTATTCTTCATTCATGTTTTAATGTTCTAATTTTATTGTCTGGCTTAAGAATGATTACATACCCAATCTTACTGTTTTATTTTTCGTTATTAAATTTGATAGTCTTTTGCTGACTTTGCTCACATGTTTGTCTGGCTTTCCTAGATATTTACTATGACAATGAGAGGAATTGAAGGTGCCTTTTATCATAAACAGAATTTTCCAAATGGCTATCGAACTTTTTGATTTTTGTAGGACTAATGTCAAGTAAGTATATGCAACATTCTTAGAGCCTGCAAGCTTTATTGCTCACAATTCATCAATTTGAGATCTTGTGTTGTAAGATTTTGAAATTGAATAAAACTTCAATAAAGAATGCATTTGTTGGATTTTAACCGTGTATCCTCAGAAAAGAATACTCCAAAGAGTTATCTTGCTGAAATTCAAGGTACATCCGGGAGGGAGCTTTTTAATTTGATAATTGTCTATGGGTGTTGCTTCAATAATTGATATAAAAGTAAGTAGGATGGGTCGAAAATGATAGATAGCAGAAATGCAAAAGGGGAAGGAACTCAAATACATGTAAGGTTGATATTAGGAATCTCCGTTACAAGCACTACTCTGCAAACTTCAAATTTCTTACTCAGTCTTGACTTGAGGTTTCGCAAAAGTTGTGCAAATGGAGCAAGTAAAGGACGAGAGACTGGGAGGTAGACGACTCAAAAATTGTGCAATTCCTTGACCAGATATATGATCGACATGGCCATGTCATGACATGCTCATCAATATCGTTATTATTTAGAGATTCATGAGTATGAGATGAAGAATTCTAATCACCATAATATGATATCATTTGTGCTTAAAAAATAAAATTAACATGAAATTTTGATGGTTTAAATATTATTTTCAAATCACAAAAAATACCACTATTTACCTATACGTGCATTTTGCTACTATAGCTTACAAAATATAAACTAAACATTAAGAGCCGTTTGTTATGGATTAAAAAATAAGTGATTTTATTGTTAAATAATTTAGAAATTAGTTTTTAGAAATTGTTAAATAAATGACTTATTTTAAAAAATAATATTTTTTAAAAAATGATTTTTATGAGAAGCTACTCAAAACAGATTCACATTTAAAGTAGTTATTAGGTTCTCATTTTTATAAAAATGAAAATCTTAACAAACGAATGACAACCCTCTAAAAATAATCATTTTTTAAAAAGCTCTAACAAGGATCCTAAGAGTATGTTTTACAGTTTTTTTTTAAAAAATAATCATTTTTTTAATTAAATAATCACTTTTAAAAGTTTTCCATCCGTTTGTTATAACTTTTTAAAAAATAAGAATCTAGAAATAATTTAAAAACTGTTTCAAATGAGAATATGTTTTGAGTAGTTTCTCATAAAAATCATTTTTTAAAGAATAATTTTTTTTAAAAAGTGATTTTTTCATTATGTTACACAAACACAAAACAACTTCACATAACCAACACCGCTGGCCTAGTGACTTAATCTATCCTAGGACACGGGGGGTCGACCCGGTGCTCCCGGGTTCGATTCCCGCAGTGGAAAAACTCAGTATTGGCCAGTGCAAAATTTGATCCTAAGCACGATCGGAGATTAGTCTTTCGTTGAAAGCGTTGGGATACTCCGTGGGTAGTCAGCGATGGTCCGAACCAAAATCAACTTCACATTTTCTTAAAAATCTCTACAAACTAAACTCTAAATTTTATAATAACAAAATCACTTATTTTTTAATCAGTAACAAACGGGCCCTAAATCATCAATATAATTTCTATACTATCGTTATGTTTTGTATTCAATCTCTATACTTCTTTTATTAGTAGTTTTGTGGATTATATTGACGAGCGAAAGATACATTCAGGGCCAAAATAACTAATAAAAAAATACAATTTGAGAATTAAAGTGACTAACTAAAAAGATATTTAGGGACGTACTTATAATTTTATAATTTTGATACATTTAAAGACTATAACGACGACGCGTCATACATTTAAGAACTAAAATTACGGTTTACACGTAACTTATAATTCACCGTTGGAGTAACGAACAAGAATAATCTGATGGTTCGGGTCGGGGCTCCGAAAGAAACGGTTACATCCATTTGGCGAAACCCTACCAAAACCCTGAATTTCGTTTCGTTGCAAAAACCTCTGGTGCAAGCTGCTGCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF12037.11	ATAD3_N	40	307	2.30E-104
PF00004.32	AAA	376	502	4.30E-23

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005524	ATP binding	Molecular Function
GO:0006508	proteolysis	Biological Process
GO:0016020	membrane	Cellular Component
GO:0008270	zinc ion binding	Molecular Function
GO:0008233	peptidase activity	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003959	ATPase, AAA-type, core
IPR021911	ATPase family AAA domain-containing protein 3, N-terminal
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A0S3SJQ5	_

SwissProt

SwissProt term	Description
ATAD3_XENTR	ATPase family AAA domain-containing protein 3

KEGG

KO	Description	Enzyme
K17681	ATPase family AAA domain-containing protein 3A/B

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G03060	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Medicago sativa L.	MsG0680030414.01.T01	_
Oryza sativa L.	LOC_Os02g46990.1	AAA-type ATPase family protein, putative, expressed
Cucumis sativus L.	Csa001242	_
Glycyrrhiza uralensis Fisch.	Glyur000382s00020374.1	_
Codonopsis lanceolata	Cl_chr02_07630T	_
Arachis hypogaea L.	AH03G08720.1	ATPase family AAA domain-containing protein 3-B like

Expression pattern