Gene detail

Detail information of Am07G000170.1 Annotation

Gene ID	Annotation
Am07G000170.1	formyltransferase, putative

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am07G000170.1	mRNA	Chr07	937105	940228	-

Sequences

CDS:

>Am07G000170.1
ATGATTCGCCGGTTATGTTGTTTACAGAGTGAGAGTCCTTCATTGTTGTCCTCCTCCTTCTCCTTCTCCTCCGCCGCCGCCACCAACAACAACTACAAAAAGTCCGTTGTCCTATTGGGAGCACCTCAGGTCTCCACTATAGTCCTCGACGCTCTTCTCACTGCTTCCGCTTCTCCACATTCTCAATTTGAGGTTGCAGCTATTGTTACTCAACCACCCGCTAGAAGAGACAGGGGAAAGAAACTCATGCCCTCTCCCTTAGCTAATTATGCTCTTGATAGAGGCTTCTCTTCTCATCTCATTTTCACTCCCCAACGACCTGGAGACGATTCTTTCTTGTCTGATTTACAAGATTTGCAACCACAACTCTGCATTACTGCAGCCTATGGCAATATTTTGCCCACCAAGTTTTTAAATATTCCCCCATTCGGAACAGTAAATATTCACCCTAGCTTGTTGCCAATGTATCGCGGTGCTGCTCCTGTTCAAAGAGCTTTGCAGGATGGTGTTAAAGAAACTGGAGTATCCTTGGCATTCACAGTTCGTGCAATGGATGCTGGACCTATCATTGCTACTGAAACAATTCAAGTTGATGATCAGATCAAGGCACCTGATTTGCTTGACCTCCTGTTTCATAAAGGATCCAAGCTTCTGATTAGGGAACTTCCTTCTATATTTGATGGTTCAGCAAGAGTGAACGCACTGCCCCAAGATGATTCTAAGGTTACATTGGCTCCAAAGATAAGTCCAGATGAATCATGGCTATCCTTTGATCAAGAAGCGTCTGTTCTCCATAATAAGGTTCGTGCCTTTTCAGGGTGGCCAGGAACTAGAGCAAAGATGTTATTAGTTGACAAAAATGGTCAGGAGAAAACTTTGGAGATGAAAATTATAACCACACGAGTTTGCAGTCATGAAAGTGTGCAGTTCGATGAAGCAGATGATATTGCATTTGTCGATGGTGCATTGGTGTTTCCATGTGGAAGGGATACCAAACTTGAGGTATTGGAAGTTCAGCTTCCAGGAAAAAAGGTAGTAAACGCAGCTGCTTTCTGGAATGGGCTAAGGGGACAGAAGCTGAAGAAATTATGA

Protein:

Promoter(3k):

>AM07G000170.1
ATATCTGTCAACCAAAATCCTTGCGAAATGGCCTAACTCTCACGAGTTCTAACATCGACAGGCTTACAAATTCCTATTGTTGAAGCAATCTCAAATAGGATTCTTAATCTCCAATATTCTTGAGGAAGATCGTGAATTCTGATCCAACATTGGAATGTGTTTGCTTTGATTCCTGGGGCTAAAATCTAAAGACTGAGGAGATAGATGTAGCAGACCTAGTTTAAGATTCCAGGATCCATTTGACCAAACTTTGTGATAACCTTCCTGAGATGAAAAGCATAATTCAAAATATCCTCTTCCATGAGAAGTCATGTGCCATTGGGAAGAAGGACTTCATAGGGTTATTAGTTTCGCTTTTAGATTACGAAACTTAGCAGGTCCATCACCCTTGGAAAGGTAGACTCTACCATGGAAAATTGGAAATTTAGTTTGCAACTTCTACTCTTTTATGATGATATCAGTGTTGGTGTCGTTCCACTGGTTAATCAGGTCATGATGGAACTCTTCCTCAAGTCATGCAACACTTGTTCTTAGTTAGGGAACGACCCAATAATGTTTAATTTGGGGTTTTCAAATAATCTCAAAAGATATAGAAAAAGAGATTATGGATAGAGGATATGCTAAAAAGGAAGCAACCTGGTGTGAACTTACCATTCTCATTTAAAGATAGTTGGAACAAGCTTCAAAATTGGAATGCATTCTAGAGACCTTCCTTGTACCCTGGGTCACACCAAAAGTAAGTTAGCCCCTCATTTTCCACCTTTTCACTTAGAAAATCTTAAAACCAATTTGCATTAAGACCCCCTCCCTAATTCACTATATCATTTCACTACAGAGAACCCTTCTCCCCTAATCCACTTGATCACTTCCCCATATTTTGACCCTAGGACTGCAACCTATAAGGAATTTGATTCAACTTACATCCTCCACCTCCATTGATAAAGCTAAAGCCCTTCATTGAAGGAAGTTAAAGACCAGTATGAGATCAGCAAACTTAGTTTTCCAATATCTATACAAAGATAATCAACAGATGTGGCCTTTCTTAAGCAATAATTTGATACAAATTATTAACATATTTTTAACTACATACCAAGTTTAGTTATAAGTATTTTGAAAAAAAAATAATGTCAAGTTTAAATAGTAAACATAATCTTTAGCACTAAGTTGAATATTCAAATAGTTGTTACATAGTACACTTATACCATACACAATACTCCTCTAAAAGTCACAATATAAATCGAACTACATAACATAAAATGCAGAAATTTTCATCAAATGTAATGGTTGGATAAGATTCATAAAAAGGGATACTTTTTACGGTCCCAAATCCAAATCGGACTAAGCAGGATTTGCTTCCACGACAGACTCACTAGGTGAACCTTTAACTGTGATGGTTATATGACAAGTGCGCTTGAGAATTTGGTTAGCTCGCCCTTGAGCTCGAGCTCTAACCCTTTTCAAAGTTTTGCCTTCATTTACCTCTGCTTTACTGATAACTAAACTTGATTTGCTGAGACCAAGGTTATTGCTGGCATTTGCTCCAGCTGAAAACACAATTTTAAGAATGGTTTCACAGGCTCGATAAGGCATGAGTTCCAATATCATAAGTGTTTCCTCGTACGAACGTCCACGAATCTGATCGATTACTCTTCGAGCTTTGCTAGCAGACATACGAATGTGTCGTCCTACAGCATAGGCTTCTGCAAAGTTGCTCTCCTGTCCTGCAGCATTAAATTAAAACATATGTTATTTGCTTTATCATTTCCCTCTAAGAAGATCAATGACTACATTACCATCCAACACAGAATGAAATATGTAAGTTACATATGGTCCTGTTTGTATACTGAAAAGCTAAAAATTGTGAGTGTCTAAAATTTCTCATGCATTCCAAGTGTCTTGTGTGTGTCAGCTTTGTTAAGTAGTAGACAATAGAGGTGGGCTATGATTCCCTGTATACGTGCTACAAACTCTCCCTTTTAAAACTCTCCCTTTTGGGATGTAATTAAAGCATGTGAGAACGAGGAAGATATATTATGTTATCTTCATGGGTGGCCAACAATACAGAATCCATATATATATATATATAGCAATAGATTTGTAATTTAGTTTTTCATATACAAAAAATAAATTAATTCAGCATCATGTTCGTTTGTAATTTAGTTTTTCATAGTATGGGAAATTAAGTATCCTAATTTTGTTCTCCCATCATGAGCAGAACTGAAAATGCAGGACGCAAGTGGTGAAGAAAAGGAAAGCAGGGAAACCTTTGAGAGATGGAAAGGTGGTAGAGAAGTTAGTTTCAATTGAATAGAGAGTAGCAGCAGATTGATAGGAAAATGAAATCCTCAAATGAAGTAGTGGTTGTGATAATGAGATGAGAAGAGAGGAAATGAAAATAATAATTATAGAATAGATTAGAGAGAATGCATTATAATAATGAGAAAGAGAAATAAAGAGAGAGTAGGTACCTGGTGGGTACTGGGAAGCGTGGGAAGCGAAAGGGTTATTATTAGGAGTTGTAGTAGTTTTTGTTAGGGAAATGAGGGTTTTGTCGTTGAAAATGGAGGAGGAACATCGAATTCCAGCGGAGGGGTTCGGCAATTTGATTAGGTTGGGTTGAAATTGGAACCGGAAATGGGGTTGTTGTGGTCGTAGGTTGTTATCAGAAAGAGGAAGTAAAGGGCGGTTGATGGTGAGCGAGAGAGCCATGAATTGAAGTCGCCACGAAATCGAAATCACTCACACGATAAGACTGGATCAGGATGGATGGGATAAACTTAACAAACATATATGAGAGAGAGAGAGAGATGATGAGAGAGAAAGAGCGCACCTGTTTCTTTTTTACTTTTACCCTTAGTAACTAACTAGTTCACTTTCTGTAAAAAACAAACCTCTTTTTTTGACAATGTAAAAAAACCTACGATACATACAGGCTAGGTTAGATAAGGCAGAAGTGAAGAGAAGTGGAAGTAGCGGTTTGTTTGTTGTATCTAAATCAGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00551.22	Formyl_trans_N	48	220	6.90E-32
PF02911.21	Formyl_trans_C	247	355	4.40E-19

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005739	mitochondrion	Cellular Component
GO:0006413	translational initiation	Biological Process
GO:0004523	RNA-DNA hybrid ribonuclease activity	Molecular Function
GO:0046872	metal ion binding	Molecular Function
GO:0003676	nucleic acid binding	Molecular Function

InterPro

InterPro term	Description
IPR041711	Methionyl-tRNA formyltransferase, N-terminal domain
IPR044135	Methionyl-tRNA formyltransferase, C-terminal domain
IPR005794	Methionyl-tRNA formyltransferase
IPR011034	Formyl transferase-like, C-terminal domain superfamily
IPR036477	Formyl transferase, N-terminal domain superfamily
IPR002376	Formyl transferase, N-terminal
IPR037022	Formyl transferase, C-terminal domain superfamily
IPR005793	Formyl transferase, C-terminal

trEMBL

trEMBL term	Description
A0A072U6C9	_

SwissProt

SwissProt term	Description
FMT_STACT	Methionyl-tRNA formyltransferase

KEGG

KO	Description	Enzyme
K00604	methionyl-tRNA formyltransferase	[EC: 2.1.2.9]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G66520	formyltransferase, putative
Medicago sativa L.	MsG0680030286.01.T01	_
Oryza sativa L.	LOC_Os01g49330.1	formyl transferase, putative, expressed
Cucumis sativus L.	Csa008806	_
Glycyrrhiza uralensis Fisch.	Glyur001087s00023145.1	_
Codonopsis lanceolata	Cl_chr03_31310T	_
Arachis hypogaea L.	AH15G32160.1	Methionyl-tRNA formyltransferase like

Expression pattern