Detail information of Am07G000100.1 Annotation
Gene IDAnnotation
Am07G000100.1 Transducin/WD40 repeat-like superfamily protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am07G000100.1mRNAChr07740847759903+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF13925.9Katanin_con805997561.60E-51
PF00400.35WD40931295.30E-46
PF00400.35WD401351715.30E-46
PF00400.35WD401752135.30E-46
PF12894.10ANAPC4_WD401421938.10E-17
Gene family
Gene familySubfamily
Ubiquitin FamilyDWD

Gene Ontology
GO termDescriptionCategory
GO:0008017microtubule bindingMolecular Function
GO:0007019microtubule depolymerizationBiological Process
GO:0005874microtubuleCellular Component
GO:0016301kinase activityMolecular Function
GO:0005737cytoplasmCellular Component

InterPro
InterPro termDescription
IPR036322WD40-repeat-containing domain superfamily
IPR015943WD40/YVTN repeat-like-containing domain superfamily
IPR019775WD40 repeat, conserved site
IPR001680WD40 repeat
IPR026962Katanin p80 WD40 repeat-containing subunit B1
IPR028021Katanin p80 subunit, C-terminal
IPR020472G-protein beta WD-40 repeat

trEMBL
trEMBL termDescription
A0A8B8LP60 _

SwissProt
SwissProt termDescription
KTN83_ARATHKatanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3

KEGG
KODescriptionEnzyme
K18643katanin p80 WD40 repeat-containing subunit B1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G08390 Transducin/WD40 repeat-like superfamily protein
Medicago sativa L.MsG0280006671.01.T01 _
Oryza sativa L.LOC_Os04g58130.1katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed
Cucumis sativus L.Csa016907 _
Glycyrrhiza uralensis Fisch.Glyur001087s00023157.1 _
Codonopsis lanceolataCl_chr01_11570T _
Arachis hypogaea L.AH05G23160.1Katanin p80 WD40 repeat-containing subunit B1 homolog like

Expression pattern