Gene detail

Detail information of Am06G025570.1 Annotation

Gene ID	Annotation
Am06G025570.1	transcription factor jumonji (jmjC) domain-containing protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G025570.1	mRNA	Chr06	144676172	144681834	-

Sequences

CDS:

>Am06G025570.1
ATGGAGGTTGTAGTTCCTAGACAAGAGCAATCAAATCAACAATCTGAGGATAAGCTGAAGTTCTCTAGATGCTCAAAATCTTTTGAAACTTCAAAGAGACAGGCTGAAGAAATTCACGGGTATGGTAATAAGAAACCTCGGCTAGAAGGGAAAGAAGAAACTACTACTGTTAGAATGGAGGCTGAAGTTGCACAACAAGAACAGTCAAATCAGCATGCTGACATTGCAGTATGTTCAGAGGGGACGCGCAAACTCTCATCTAAGAGAGGAGACAGGACAAAAAAACTTGTTGCCTCAAGCAAGAAAAGGCAATTTGAGGATGATCTCTTTATTGACGATCTTGAAGAAGACGAAGAAATGATTTTTCTTTTAAAGACAAAGTCCAGGAGCAGAGCTGGTCGAAATGAGAATGGCATTCAACAAAATCCCCGAATATGTCATCACTGCATGAAAAGGGAGAGAACATCTTTTGTGCCTTGTGCTAAGTGTCCAAAACTGTACTGTACGCGATGCATCAATCAATGGTACCCTAATATGTGTATAGAAGAAATTGCTGAAAGTTGCCCATTTTGTCGTAAAAACTGCAATTGCAATGTTTGCTTGCGTTCAAAAGGAATGATTGAGACATCTATTGTGGACATCACCAATTACGAAAAAGCTCAATATCTACACTACGTGATTAACTTACTCTTTCCATATGTGAAACAAATTTGTCATGAACAAAGTCAAGAAGAAGATATTGAAGCTAGAACTCAAGGAAAATCTTCCTCTGAGATTGAGGTACCACAAAATCTTTGCGGTGACTATGAACGTGTCTATTGTGATCATTGTGCTACTTCAATCATCAACCTTCATCGATGCTGCCCCCAGTGTTCCTATGAGCTTTGTCTTACTTGTTGCCAAGAAATACGCGATGGAAGCATTACACCCCGGGATGAGATGAAGTTCCGATATGTGAATAGGGGTTACGATTATATGCATGGTGGCGATCCTCTACCAGTGTCCTGTGATTTAGAGACTTCAAATGACCATCTTGGGCTATATACTAAGTGGGAGGCCAATAGTGATGGAAGTGTTAGTTGTGCACCAAAGGAGATGGGGGGTTGTGGAAGTTCTGTGTTGGAGTTGAGGCGCGTCCTCCCAGAAGGGTGGATATCTGATTTGGAATCCAGAGCTCGAAATATACTGAAAATATGGGAAATTGAACAAACAACTCTTCAGCAGAATGAAACAGCATCAAGGTTCAACTCTATGAGTAAGGAATACGTTAGAGAAAGCACAAATGAGAATAAGATATACTGTCCAGAGTCAAAAGACATTTTAAAAGAGAGGCTGTTGCTCTTCCAAAAGCATTGGGCTAAAGGTGAACCAGTTATAGTTCGTGATGTTCTTGAACAGGGGACTGATCTAAGCTGGGAGCCAATGGTCATGTGGCGAGCATTGTGTGAAAATATGACATCAGAATTCAGTTCAAAAATGTCAGAAGTGAAGGCCATTGATTGCATGGCTAATTGTGAGGTAGAAATTAATACTCACAAGTTCTTTAAAGGTTATATAGAGGGAAGAACGTATAGAAATCTCTGGCCAGAAATGCTCAAGCTAAAAGACTGGCCCCCCTCTGATAAATTTGAAGATCTTTTGCCTCGCCATTGTGACGAGTTCATTCGTTCCTTGCCATTTCAAGAATATACTGATCCTCGATCTGGTATTCTCAATCTTGCTGTAAAGTTGCCAGCCCATGTCCTAAAACCTGACCTGGGTCCAAAAACATATATTGCTTATGGGATTAAAGAAGAACTTGGTAGGGGAGACTCTGTAACAAAGCTTCACTGTGACATGTCAGATGCGGTGAATATTTTGACCCATACAGCAGAGGTAAGATTAACGGATGAGCAGCACTCTATTATTTCAAAGTTGAAAAAAGCACACAAGGCACAAGATGGGAGAGAAAACTACCCTCAAGATAGGGTTGCTGATTTCTTGAATGGTCGACCTTGCAAAGACAGTGGAGAATTTATTGTAAATGCAGAAGTATCTGAATGCAAAGATAAGGAGAATCGTCCTATTGAAATAGATGGAAAAATCTTTCAAAATGAAGTGTCTGAGGGAGTCACTTCTCCAGCTATGTCTGATATAGAAAATGAATCAATGGAAACTGGTAGTGCCCTGTGGGATATATTTCGGAGAGAGGATAGTGAAAAGCTAGAAGCATATCTAAGAAAACACTCGAAAGAATTTCGACATACTTACTGTGCTCCGGTTGTACAGGTTGTTCATCCGATTCACGACCAATGCTTTTATTTGACTTCTGAGCACAAGAAGAGGCTGAAGGAAGAGTTTGGTGTAGAACCGTGGACTTTTGAGCAGAAACTTGGAGAGGCAGTAATTATTCCTGCTGGATGTCCACATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTGGCTGTAGACTTTGTGTCCCCTGAAAATGTTCATGAGTGTTTGCGTTTAACTAAGGAGTTCCGCCAGCTTCCCAAAAACCACAAGGCTAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTTTATGCAGTTGATCAAGCTGTCAGAGACCTAGAAGATTTAGTTAAATGTTCTTGA

Protein:

Promoter(3k):

>AM06G025570.1
GTTGCAGCTTTTTGACTTTTACTGCGCGCATCAGTGTCAGCGCGCCTCAGTGTCAAGTCTGCTGCGCGTCAGTGACAGTCTGCTGCGAAAAGCTGTTATTTTGTCTTTTGCCGCGAATTTACGATTTTGTCATTAATTTTAGACAAATAGAAAAATTTGAAGATTACTAATAAAGTTATTTTGCTGGTATATTTTTTGAAAACATACTGCATTTTACTGGTATATGTTTTGATCATAGAGAAGAAGTAGATGTAACCAAAAAAAGTAATGTGGTATAGTTATGTCCCACCATATCTTAATCACTCTCTCGGGGGATAGGAATTGTGATCCACGTGGACGAATCAAACGGTTAACTAGTACGCATGGTTTGGTTTTTAGAATCTTAAAATTGAAACATGGCCCAAAACAACTCAATATAAAAAAGAAGGTTTAAATATATATTACCCCCTGCAAATATACCCATTATCCAGTTACCTCCCTACAAAAAAAAACATTTAAAACAAACCTTGCAAAATATAAAGTTATCCAGTTACCCCCCTGCCGTTAAATTTTCTGTTAAAAAATGTAAAATGTCACGTATCCAGTTACCCCCCTGCCACGTGTCACCATATTATTGGGCCTCTGTGACACGTGGCACTGACTGCCACGTCAGCATCCTGTGTCACCAGTGCCACGTCAGCAACCAATGGATGGCTGCCACGTGGCACTGTTGTTAATTCAAAATAAATCTTCAAAATGGCTATAGTGGGTGTTGAACCTGTGACCAACCACTCACACACACACCCCCTAACCACTTAGCCACCTTATTACTTGTGATTATTAACACAACTACTAATATATATTACATCATTGATACTTAATTTAAACCCAGAAATACTGATCTTCATCTTCAACCTTGTAAACCCAGAAAATGCAGAAAAACGAAAAATCCCTGATTAAAAATCAAATGTACATAATCAGTTTTGTCCTAATTTCGTGTTCATAATCAAACTGATCGTGAACACAAACGGAAACGAAATCTGCAGATCTTCATCACTAAAGCGAAATCGAAACAGATCTGGAAAACAAAAACGAATCTGGAACAGATCTAGAAGCACTCATGTGAAACAAAAATGGAGATGGAATTGTTCCTGGGTTTCGTGGGTCTCGATTTGTGAAACTGTAAAATCAAATCAAAGATCTAATTAAAACTCAAATCTTCATAATCAAAACAAAATTGAAAACGAAATCCAATCTGATTGAATCCTTTTCTAGATCTGTTTTATATATGATTCAATTCGTTTTTATTTCATTTCGAATCTCATTTCTAGTTCAATTCGTTTTTAATTCATAATCAAAACAAAATCGAATCTCGTTTCTGGTTCGATTCGTTTTTATTTCTGGTTCAATTCGTTTTTGTTTCTCAGTGGTTTTTATTTCTGCATTTTCTGGGTTTACAAGGTTGAAGATGAAGATCAGTATTTCTGGGTTTAAATTAAGTATCAATAATGTAATATATATTAGTAGTTGTGTTAATAATCACAAGTAATAAGGTGGCTAAGTGGTTAGGGGGTGTGTGTGTGAGTGGTTGGTCACAGGTTCAACACCCACTATAGCCATTTTGAAGATTTATTTTGAATTAACAACAGTGCCACGTGGCAGCCATCCATTGGTTGCTGACGTGGCACTGGTGACACAGGATGCTGACGTGGCAGTCAGTGCCACGTGTCACAGAGGCCCAATAATATGGTGACACGTGGCAGGGGGTAACTGGATACGTGACATTTTACATTTTTTAACAGAAAATTTAACGGCAGGGGGGTAACTGGATAACTTTATATTTTGCAAGGTTTGTTTTAAATGTTTTTTTTTTGTAGGGGGGTAACTGGATAATGGGTATATTTGCAGGGGGTAATATATATTTAAACCAAAAAAGAATGAAGGGGAAAAAAAGGAAAAAAAAATCCGTGTATCGGGTAAAGCGCATTCTTAGCTGACTCTCTTACATTACATCTCAACTAAACTGTGGGTATCTGTGTGCGTGTTACGTGTTTTTCTCTCTTCTTATCTTATAGCTTTTTATTACCCTTCTCATTCTGATTGCGATCTCTGCACTCCATTTAATTCAGATTATGATTCTCTAAAATTTCGCTTTCAGATAGATATTTAACAGCGTTGAATCTGTTTCCCAATCTTGTCACCGATTCTTGAATAAATATAACAGCACCGAGTTGATCGATTTTCAGGCTGAGAGTTTTTTCATGATCTGCTTGGCTTCAATTGATTTTCATCCTCTCTTTCAGGTATGAATTCTGAAATTCTGCTCTTCTATTTTTTTTTCTTTAAAAAATTATTATTACTGTGCCATGCAAGACATGCGCTAAAACGTCTTTGGAACGCTGTTAATTTTCGATCTTGTTCGGTGCCTGCGCATGAATGCGTTTTGAGTTCTTGTTTTCTTTTCAGTGTTTCTGGTCTTTTTGGATTAACCGATGTTGTTGTGTTGACTTGAGTCAAGTCAACTCAATTCGGGTTTTGACTTGATAAGTATCGAAAATATTGCTGAAATTCATTATGCGATGGATTTTATTGTATGTGTAGATTTTCAAGGGAATATGTCTTCCTCCTTAAAATCAATTTGTATTGATGATTCAGTGATACAGCTTCTTATGGTATCTAATCTAATTAGTCTAAATCTGTTACCTTGCCATTCCCCCCTTATTGTTTTTTCGATTGATTATCAAGTTTGATTGGTGCAGAAATTGCTTTGTTTCTTTGATTCTCACTTTTCTTAACCGTGACTATTATGACTGGGGCAGTAAACTTATGCCGGCAGTGTGTTTAGGTTTAGGTTTAGGAATTTATATTTTCTTTTACTGATAAGTGACTATATGTTTTGCTCAGATTCAAGCTATTTTGAAAGATCAGCATGTCAGTGCTTAAACGAGTGATAATCTAGATTGTGGTTTTTGGATATTTGTTGTTATTTGAGTGTATTTTCTTGTTGATTCTGCAGGAAGA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02373.25	JmjC	712	818	4.00E-16

Gene family

Gene family	Subfamily
Transcription Factors Family	Jumonji
Epigenetic Regulators	JMJ29

Gene Ontology

GO term	Description	Category
GO:0006429	leucyl-tRNA aminoacylation	Biological Process
GO:0048608	reproductive structure development	Biological Process
GO:0009791	post-embryonic development	Biological Process
GO:0016491	oxidoreductase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR018866	Zinc-finger domain of monoamine-oxidase A repressor R1
IPR001841	Zinc finger, RING-type
IPR003347	JmjC domain
IPR045109	Histone demethylase JHDM2-like

trEMBL

trEMBL term	Description
A0AAN9MZZ1	_

SwissProt

SwissProt term	Description
JMJ29_ARATH	Lysine-specific demethylase JMJ29

KEGG

KO	Description	Enzyme
K15601	[histone H3]-dimethyl-L-lysine9 demethylase	[EC: 1.14.11.65]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G62310	transcription factor jumonji (jmjC) domain-containing protein
Medicago sativa L.	MsG0880047672.01.T01	_
Oryza sativa L.	LOC_Os02g58210.2	jmjC domain containing protein, expressed
Cucumis sativus L.	Csa020849	_
Glycyrrhiza uralensis Fisch.	Glyur001158s00022952.3	_
Codonopsis lanceolata	Cl_chr05_08640T	_
Arachis hypogaea L.	AH01G12590.1	Lysine-specific demethylase JMJ25 like

Expression pattern