| Gene ID | Annotation |
|---|---|
| Am06G024560.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G024560.1 | mRNA | Chr06 | 142048192 | 142069642 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 980 | 1270 | 5.00E-73 |
| PF14619.9 | SnAC | 1504 | 1599 | 5.10E-20 |
| PF00271.34 | Helicase_C | 1296 | 1409 | 9.80E-16 |
| PF04851.18 | ResIII | 975 | 1137 | 1.80E-11 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Epigenetic Regulators | CHR3 |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0004386 | helicase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR029295 | Snf2, ATP coupling domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014012 | Helicase/SANT-associated domain |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| trEMBL term | Description |
|---|---|
| A0A371EQ48 | _ |
| SwissProt term | Description |
|---|---|
| SYD_ARATH | Chromatin structure-remodeling complex protein SYD |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT2G28290 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Medicago sativa L. | MsG0880046990.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.85 | expressed protein |
| Cucumis sativus L. | Csa000055 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000055s00004575.1 | _ |
| Codonopsis lanceolata | Cl_chr05_19950T | _ |
| Arachis hypogaea L. | AH14G03790.1 | Chromatin structure-remodeling complex protein SYD like |