Gene detail

Detail information of Am06G023630.1 Annotation

Gene ID	Annotation
Am06G023630.1	homeobox-leucine zipper protein 3

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G023630.1	mRNA	Chr06	138972851	138974104	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM06G023630.1
TTTGAATCCAGTCTTGGGGATGCAGCAGTGTTAAATCTATTGAGGGAGAGCTTAATTTGCCGCCTATTGTGATCATACCCAGCTCGAAGGATTAGTCTCTGCAATTGTGCGCAGCGGATACTCGATTTATAAAAAAAATTCATTGGAAATTTATTTCACAGGAATAAGATGTGTTATTGCAAAAATTGAAGATAAAGAAAAAAGGAAAATATACAAAGAAATTCGTCCACCCACATATTTGATAGCTTCTCCCATAAAAAATCTTGAAATACCAATTCTACTACTCCCTCCATTCCGATCTTTAGTACTTTTGGGTTGTTATACACAGATTAAGGTATCATTAATTTGTGTTAGTTAAGTACTAAAATACCCTATTTGTAGTTGTCTTGGAATAGATGAAGTCACAATAAAAGAGTCTTGAAACAATTAACTCATACTTTAGGACTCTAAATATGACTCAATAAATATAAATGATATATTTGGAAAAATTTGGTAAATTGTATATTATGTTTTTAAAAGTACTATTGTTTAAGAAGAAAAATAAAAAACCAAAAGTATCAAAGTTCAGGAACGGATGGAGTAGTATTTTTTTTTTAATATTTTGAAGGGGGGACAGTAATAATAAACGTTTTAGATTATTGTCGTCATTACTCAGGCAATCAGGCATGTTGCTGCAAGTTACAAGCAGCATATGATTAAGGCAGCTAGCTGGTTGATAAGTGGGGATCAGTCTCCCTAGCTCTTCAATTTTCCACCCTCTTCAAGTGGCAACATTAACATATATATATATATATATATATATATATATATATAGGGAACAAACCAATTAATACATGCCTTTCTATGTAACAGCAGCAGTTTGCCTTTGCCTTGGGTAATATAGGAGTAGTAGTACTACCAATATTCATCACACTTTAGCCGTTTCTTGAATAATTTGGCAGCAATTGAAACTCTAAAATCTGATCACTCTGGTCCAACCTCAATAATTAGCAGTTATGTAACCTTCAATTTTATACTATCAATTGGTCGAAAATACTCATCGTATTATAAGTAGCTAAAAAACTTAAAAATAAATAGATATTGGTGTCCCCGTTGGTTGTCTTGACAATTTCAGCGACATGAGGACGTTAGCTTCCAGGTTCGATCTCAGGTGTGAGCTAGTGGTAGTGTGCGTGGTGCTTATTTGTCATTTTATCTAAATAGACAAAAAAAAAGATACGGGTTAATATAGATCAGTTAAGCAATCAATATGGTTGAAAATAAAACTTTTCTTTTTATATTAAAGACTGAAAAATACTCCTCATTTTGATTTGATTCTTAGAGAACAAAACCTAACACAAATCAAAGAATTATATTGAATAATTGTAAAAAGAATTTCAATTTCAAAAAGAATAATTAAAGAAATTGATATTTGTTTCTTATAGTTTTAAACAAATTCAGCAACGGGAGAGACGCCAGTCGAGAGGCAACAGAGAGCGACAAGTAAGGGGAGAGACAACGGGAGTGACAACAGGAGAGGCAACAGAGAGCGGCAATAGGGAGTGGCAACGAGGGTGCATATCTACTATTAGATCTCATTTGCAACACGAGTTTTTTAAACAAGTTGAAATGTAGTTTTTTTATTGACTTTTTCGTTTTTATTAAATTTTAAAATTTCAAAGTATTTATAGGTTCATAGTAAATTATAACAAATACAAAGCCGGGTATACACGTGGCCAGCCAGGTTCCCTAGCGTAGACTAGTCATCGGTAAAGCCGGTGAAAACTGCACACCAATAACATAGTAACAAAAAAATTTATAACAAATACGGTGTCACCCATGCAGATGCACGGGTAAAATACTAGTTCGGTGGTAAAGATCTTTTTTCATAAAAAAAAGGAAATGATAGTAATTGATAAAGATAACATGCACTACATGTTTTAAGAACATGTAATAATTTTTCAGTTTGGGTCTATGTTTCAAACTAATCAGTTGCTACTCTCATCATTAACGCCAATCTATTTTACTAAATTGCCCCTTGGATCGTAGTCCCCAAAATTACGCAAGTCGGCAAAGATTAACGCATGCCTTATATTATGTATGGGACATATCGTCAAACGTGGTCATTTTGGGGATTAACAGTTATTTATTGATTTTTTTGACTAAATTGAGCGTTGTGAAGTCTCAATCACTTTTATCATTCGGTTGGTTTCCCTGAGACAACTTAACTTTGATTTACTCCTTGAATTAGTAATATCTTTCATTTCTTTATTTCTTTATCGTCAATTTATTTAATCTGTTCTTCAACACAGATTGTCATTTTTTTAATAATTTACCTATAAAAAATATAATCCATATTTTTATCTATATTAATTTTTTTATTTAGTTTTCTAGAGTATTTTTATATCTTTAATATATTTTTTGTTCTCAATTGTTTGTAATTATATACATAATGGGACATGTTTGAATCCATGAAACAATGAATTATCATTGGATTAGGAAAGCTAGCTATAGACTACTAATTGAATAAGCTTGGAAATTAAATAAATAAATAAATGAAATAGTCAAATGAGTATATGTCATTAAGAAAAGTTCAGTTTTTTTTTTCTTCAAAACGTAGTCACAATTAATTAAGGTCTAACGCATACTTTTACTCTCCTCTCCAAATTTATAATATATATTATTATTAATAATCGTCGTCATTGATTAGTACCATAACATAACTACTCCAATGACTCAATATATACATATACACATAATTTTTTTGTGATGGAAACATGTTACCCAATAATAACCGATTGAAAATTGAATTGAATCTCCAAGACCAAAAACCAAACCCACCCAACAATAAAATCTGTATTAAATATCCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGAAAAATAAAACTCAACTTTCCCATTTGACTGTGTACCCTACATATACACACAACTTCAATTCCTTCTTTTCTACCTCTTTCTCTTTTGCATCTCTCTCTCTGGCATAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00046.32	Homeodomain	84	138	5.40E-16
PF02183.21	HALZ	140	173	1.10E-08

Gene family

Gene family	Subfamily
Transcription Factors Family	HB-HD-ZIP
Transcription Factors Family	HB-WOX

Gene Ontology

GO term	Description	Category
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0043565	sequence-specific DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR003106	Leucine zipper, homeobox-associated
IPR009057	Homeobox-like domain superfamily
IPR017970	Homeobox, conserved site
IPR001356	Homeobox domain

trEMBL

trEMBL term	Description
A0A0K2CT21	_

SwissProt

SwissProt term	Description
HAT3_ARATH	Homeobox-leucine zipper protein HAT3

KEGG

KO	Description	Enzyme
K09338	homeobox-leucine zipper protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G60390	homeobox-leucine zipper protein 3
Medicago sativa L.	MsG0580024545.01.T01	_
Oryza sativa L.	LOC_Os03g12860.1	homeobox associated leucine zipper, putative, expressed
Cucumis sativus L.	Csa021879	_
Glycyrrhiza uralensis Fisch.	Glyur007579s00046034.1	_
Codonopsis lanceolata	Cl_chr08_21800T	_
Arachis hypogaea L.	AH05G03030.1	Homeobox-leucine zipper protein HAT2 like

Expression pattern