Gene detail

Detail information of Am06G022590.1 Annotation

Gene ID	Annotation
Am06G022590.1	ABC-2 type transporter family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G022590.1	mRNA	Chr06	135800004	135803135	-

Sequences

CDS:

>Am06G022590.1
ATGATTTCTTCTCCCACTTTGCATGTGTACACAAACACCACAATGGGATCACAATCACAATCACAATTCAATCACATCTCATGCCCCAGAAAAACCACATATAGATTACAAACCAAAAACTTATCATACAAATTATGCAGCCAATTTGATGAATTTAAAAGTCTTTTTTTCAGTTTGAATCCTAATAGAGATGGAAAGTTCATTTTGAAGGATGTTAACTGTGAAGCAAGGCCAGGGGAGTTAACTGCTATTGCAGGTCCTAGTGGAGCTGGAAAAACCACACTACTTGAAATTCTTGCTGGGAGAATATTGCCTCACAAAGTATCCGGCGGAGAAGTACTTGTCAATCATAAGCCTATGGATGTAAACAGATTTAGAAGAACATCTGGTTATGTCACACAAGAAGATGCTTTGTTCCCATCACTTACAGTTAAAGAGACACTCATGTATAGTGCTTTGTTGAGGCTTCCCGGGGGACGAAAAGTGGCTTCCATGAGAGTTGAAAAGTTGATGAAGGAGCTTGGGTTGGAGCACATTGCAGATTCAAGAATTGGACATGGATCAGACCATGGAATATCAGGCGGTGAAAGGCGTAGAGTTTCAATTGGCGTTGACTTAGTTCATGATCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGTATCAGCTCTTAATATAATATCATTGCTTAGACTAATGGCATTGAATCAAGGTAAGACAGTTGTTTTAACTATCCATCAACCTGGTTTTCGAATCTTAGAGCTATTTGATTGTCTCATTTTGCTGTCTGATGGATATGTCATGCATAATGGGTCATTGAATCTTCTTGCGACTAGGCTCAGATTATCTGGTCATCAAATTCCAGACCATGTCAATGTCCTAGAATTTTCTCTTGATGTCATGGAAAGTTTGGTTATACATACTTCAGAAACTGAGAACAAGAACAACCCATTTCTTCTCAATGACAAAGAGCAACAAGATCACAACATGAGGATGCAATGCTCTAAGGTTTTCAATGAAAAGGTTCTTTTGTACTCAAATTCTTCACTAGAGGAGATTTTAATCCTAGGAAAAAGATTTTGCAGCAACATATTCAGAACAAAGCAACTCTTTATTGCAAGGGTTATACAGGCTTTAGTAGCTGGATTTATATTGGGGAGTATATTTTTTAATGTTGGCAATCAGCAAAGTCAATTAGCATTACAAACAAGAAGTGGTTTCTTTGCTTTCAGCCTTACTTTTTTGTTATCATCCACAACAGAAGGGCTACCTATTTTCTTGGATGAAAGAAGAACTTTTATGAGAGAGACATCAAGAGGAGCTTATAGAGTTTCTTCTTATGTTTTAGCAAATACACTTGTGTTTCTTCCTTTTCTTCTAATGGTTGGTCTTCTATTCACTACTCCAGTTTATTGGCTAGTAGGATTAAGAAAAGACATTGATGGTTTCCTTTACTTCTCTTTAGTGGTTTGGATGGTTCTACTCATGTCAAATTCTCTAGTGGCATGTTTTAGTGCCCTTGTACCAAATTTCATCTTGGGAAGTTCAGTGATTGCTGGTTTAATGGGATCTTTCTTTTTGTTTTCAGGGTATTTTATATCAAAGGAAAAAATACCCATTTATTGGATTTTTATGCACTATTTGAGCCTATTCAAGTATCCATTTGAGTGTCTTGTGATAAATGAGTATGGTGGTGAACAACGGAAGAGGAGATGCATAGAAATTATCAATGGAGAATGCATGTTATCTGGAGTTGAGTTCTTAAGACAACAGGATCTGAAAGAATCACATAAATGGACCAATTTGGGTTTAATGTTAAGCTTCATAATAGGGTATAGAGTACTTAACTTTTTAATTCTTTGGTTTAGATGTTATAAAAGCAGAAAATAA

Protein:

Promoter(3k):

>AM06G022590.1
AGTTGAGATAGATTGGCGGGTTTGGGATCGGTGCTGCACACACTAAAAGATATTATTAGACTAAATGATAAATATTAACCAATGTTTTACGATTCTAAGTTTAATTTTTACGATAGTCAATGAAAAAAATTACATAGTCACCGACAGTCAATAGTTTCCGTCTCATTTAATGAGTTTAAAACACGTGATTTATTATAGTACTATTTTTAAAATACTTTTACATGTCAATTGTTTATATGTGTAAAATATTCTTACATTAATATTGCATATAAGTTAAATTTTGTTAACAAAATGATATAATTTTTTTAGGCTAAATTATAGTTTGTCTCATTATTTTCACAAATTAAGACATCTAGTCCTCCTATTTTAAAACCTAGACATTTAGTCTCTCAATTAACTCAGACATTTAGTCCATAGAGGGTTTTTCACATTTTTTTAGGTGATGTGGACCGAATGTTTTAAAATTTGGGCATGTCTTTTCCCACACCCCTTGCTACTCAGCCCACACCCCTAAAGCCCCTAAATCCCCAAAATACCCTTAAATCAAAAACACCCCCACAAAGGGAAACTAGTGGATTCGGTTGAGGCCTCCCGAAAATTTTTTGTTGAGGTCAACTGAATAGTGTAAAAGAGGGATGTGTCTCAAAAAAATACCTGTTCGGGTGTGCCTAACCGTAAGTTTTCGGCTGACCGTAACCGAATCGGTAAAAATTCAAAAAAAACACAGAACGCATGCCTCATTAATAGCATATTGGTCATTTCGCAGGGTTTGGAGGTGTGGGGTGAGTAGCAAGGGATGTGGGAACGCACGCATGCCTCATTAAAATAATACTCCTTATAAATTTTGTGAAGACTTTTATTATTGAGGGTGTGCAACTGTACACCTTCAAGTGTACATAGGTCCGGGTACCACTCAAATTCACATAAAAAAAATAGTAAGGGAGGACATTAACAAAACCCCCCAAAAAAATACTATGAAAATGAGTGACAAGACAACTCCAATCTATACCTAACAAATCCTCGGAGATAAATCGGGAAATGAAATCCCACCAAGCAAAAACAAAAACAGATAAATCGTGTTCCGCCGATTTATTCTGTACAATGATTACCCGCTCGAAAAGCATGAGAAACAAAAGAAGTTATTTCTGAACCTAAGAGCATACACTTCGAAGAATAAAATCCCCATTGTGATTATGAATCAACCCACCAAACCAGCAACACCTGGGTTGTTAATGGCACTGCCATCCACATCCAGCAAAACATCAATGGTACGACTATAAAGTTAACTATAAAGAAAACGTTTAGATTTTGGGATCAAACTACTTGTTTTAGGTTTAGTGTTTGACTGAATTATCACGGTTCACAATTACTAATGTATTAATTATATATAATATCAATATACGGTTATGTATATTTGGAACGGGACGGGTAACTCGAGGGTCAACTCGAACGCGTCCTAACTCAAAGCAGAATTACTACTTTGGACAGTCCTGTTTCTCCATTACTTTGTGTAGGACTGGGTTGGCTTCAACCCAAAATTATTGAGTTGAGATAGATTGGCGGGTTTGGGATCGGTGCTGCACACACTAAAAGATATTATTAGACTAAATGATAAATATTAACCAATGTTTTACGTTTCTAAGTTTAATTTTTACGATAGTCAATGAAAAAAATTACATAGTCACCGACAGTCAATAGTTGTCGTCTCATTTAATGAGTTTAAAACACGTGATTTATTATAGTACTATTTTTAAAATACTTTTACATATCAATTGTATATATGTGTAAAATATTCTTACATTAATATTGCATATAAGTTAAATTTTGTTAACAAAATGATATAATTTTTTAGGTTAAATTATAGTTTTAGTCTCATTATTTTCACAAATTAAGACATCTAGTCCTCCTATTTTAAAACCCAGACATTTAGTCTCTCAATTAACTCAGACATTTAGTCCATAGAGGGTTTTTCACATTTTTTTAGGTGATGTGGACCGAATGTTTTAAAATTTGGGTCTGTCTTTTCCCACACCCCTTGCTACTCAGCCCACACCCCCAAAGCCCCTAAATCCCCAAAATACCCTTAAATCAAAAACACTCCCACAAAGGAAAACTAGTGGATTCGGTTGAGGCCTCCCGAAAAATTTCGGTTGAGGTCAACTAAATAGTATAAAAGAGGGGTGTGTCTCAAAAAAATACCCGTTCGGGTGTGCCTAACCGTAAGTTTTCGACTGACCCTAACCGAGTCGGTAAAAATTCAAAAAAAACACAGAACACATGCCTCATTAATAGCATATTGGTCATTTCGCAGGGTTTGGAGGTATGGGGTGAGTAGCAAGGGATGTGGGAAAAGAAAGCCCCTAAAATTTTACGGTTTGGCCAAACAATAGTTGTTTATTAAAAAACAACAATTATGCCATCATATTACTCACTGATGCTCATTAAATCAAACAAAAAAATCGTGTCATTCATTAACAAACTTCTTCAGTGGTTTACCCATATATGACCTTACTATATAGTATATACACAACGCGAATAACAAAAGAATAAAATGTAAACAGAAAATTATTAACACACAGTTGAAAAGAATTCCAGTTAACTTGTAAAACTCTATTTGATATTGTTTTATCTTCTACCAACCAAAACCTGAGCTGTCTCAAACAGTGATACACGGGGGAAATAGTGGGGCAACCAAACACCAACATAGCATAGTCAATATCTAGCTCACCTGAAAAGCATCTTTTGTATACTAATGTCCTTCCTTCCTTTCTTTGATTTTCTTAAAGAACTTGAATTAATCAATAACTTGCCAAGTACCGCACATCAATAGGAAATAGAAAAGTGGATGAAGTCAGGTCTTTTGTACAAAATGTCAAGGCAAATTCATTACAGATTCAATGTTATCTTTCTTTAGCTTAATCTATAACTAGCACACAGTTTGGTGTGTTAGCTCATCTCCCTTTTTTCCTTTATGCCTTCATAACATTACTTAGGCAATAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	356	567	6.90E-45
PF00005.30	ABC_tran	69	220	6.60E-29

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0140359	ABC-type transporter activity	Molecular Function
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013525	ABC-2 type transporter
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A396JF38	_

SwissProt

SwissProt term	Description
AB10G_ARATH	ABC transporter G family member 10

KEGG

KO	Description	Enzyme
K05681	ATP-binding cassette, subfamily G (WHITE), member 2

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G53270	ABC-2 type transporter family protein
Medicago sativa L.	MsG0280010111.01.T02	_
Oryza sativa L.	LOC_Os01g42900.1	ABC-2 type transporter domain containing protein, expressed
Cucumis sativus L.	Csa003995	_
Glycyrrhiza uralensis Fisch.	Glyur000018s00003679.1	_
Codonopsis lanceolata	Cl_chr07_03520T	_
Arachis hypogaea L.	AH18G16240.1	ABC transporter G family member 10 like

Expression pattern