Gene detail

Detail information of Am06G022320.1 Annotation

Gene ID	Annotation
Am06G022320.1	eukaryotic translation initiation factor 2 gamma subunit

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G022320.1	mRNA	Chr06	133839996	133845045	+

Sequences

CDS:

>Am06G022320.1
ATGTCTCGGAAAGGTTTGATGGAACAAGACCTCAATAAGTTGGATGTCACAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGCCAAGCTACTATTAATATAGGCACCATAGGTCATGTGGCACATGGAAAATCAACAGTTGTGAAAGCAATATCGGGTGTTCAGACTGTGCGTTTTAAAAATGAGTTGGAGCGTAACATTACAATCAAGCTTGGCTATGCAAATGCAAAAATATATGAGTGTGAAGATGAACGGTGTCCAAGGCCTATGTCCTACAAGGCTTATGGAAGTGGAAAGGAAGATAATCCCATGTGTGATGTGCCAGGGTATGAAAACTGCAAGATGAAATTGCTGAGACATGTTTCATTTGTGGATTGCCCGGGTCATGATATTCTCATGGCTACAATGCTTAATGGGGCAGCAATCATGGATGGAGCTTTGCTTCTCATAGCTGCTAATGAAAGCTGCCCACAACCACAAACCTCTGAGCACTTAGCTGCAGTGGAAATTATGCAGCTTCATCACATAATAATCCTCCAGAACAAGGTAGACCTGATTCAAGAAAATGTGGCTATCAATCAGCATGAAGCGATTCAGAAGTTTATACAAGGAACAGTTGCTGGTAGTGCACCAGTGGTACCTATTTCAGCACAATTGAAGTACAATATTGATGTTGTGTGTGAGTATATCGTGAAAAAGATCCCAATCCCTGAAAGGAACTTTATTTCTCCACCTAATATGATAGTAATTCGGTCCTTTGATGTCAATAAACCTGGTTTTGAGGTTGATGAAATAAAAGGAGGCGTAGCTGGTGGAAGCATTCTGAGGGGTGTTTTGAGGGTCAACCAATTCGTTGAAGTTCGACCAGGAATAGTTGTTAAAGACGAGAGTGGAAATATTAAATGCACACCCATATACTCTAGAATAGTTTCATTGTATGCTGAGCAGAATGAGCTTCAATTTGCTGTGCCTGGAGGCCTAATCGGTGTTGGGACAACAATGGATCCCACTTTAACTCGTGCTGACAGGTTGGTAGGGCAAGTTCTTGGAGAGGTTGGGTCACTGCCCGAGGTTTTTGTTGAACTTGAGGTAAATTTTTTCTTGCTTCGACGGCTTCTTGGTGTCAGGACAAAAGGCTCTGAGAGACAGGGAAAGGTATCTAAGCTGGCAAAATCAGAGATGCTAATGTTGAACATAGGATCAATGTCAACAGGGGCCAGAGTAATTGCTGTGAAGAATGACTTGGCAAAGTTGCAACTTACATCTCCTGTGTGCACCAGCAAGGGTGAGAAGATTGCACTCAGTCGACGTGTCGAGAAGCATTGGCGTCTTATTGGGTGGGGACAAATCCAAGCAGGAATCACTCTTGATGTTCCCGCTGCCCCCATTTTGAGTTGA

Protein:

Promoter(3k):

>AM06G022320.1
AAAGTCAGTTGTCGTGGAGAAAAATGTTAAACACACGACTAATGCCCATCAAGCTTTAATTATGAAGGTACAACAAAATTTAGCCTTGAATAGGCAGCAAGGATTAGAGAAGATTTCATGCAATCTAATGAAGAACTAGATTATGTCCATTTTGGTCAAGACTCATTTGCTTTAAATGAGGATAACCAAGTGTCGGCTGCGGTTACTATGAAATCTATTTAGAAGTTGTCTAATGCTTCTACCTCTGGTATACAAACAGAAGTACAAGACAATATTGTTCAGTTTTCTCATGCCTCTGATACTATTAGTTGTTGTAATATTGAAACTCCTATTGTTCACTCTAACGTCAACGTAGGTCATTGTTGGAGTAATTCTATTGATCCGCCCTCCACTCAGTCTCCCACTATCAGACAAGATTCGCTAAATGCCTGAGTCTGATGCTACTTCTAACCCAGTGGTAGCATTTGACATGAGAATATTAGTAAAGCATTGGGGGTGATGTGTTAGATGAAGATGTTAATGCTATAGATACTGATACCCAAGGAATACTGGCGCATTGTGATAATTTCAACCCAGTTATGTCCAAGGCCCAAAAGAAGAACATGCTAGATTCGCTAAATGACTTAGAGTCCGCTGCTACTTCTTATCCAGCAGTAGCAACTGACATGAGAACTTTAGCAAAGCTTTGGGGTGGTGGATTAGAAGATGTTGGCGATCATGTGGCTCCCGATACTCAAGGAACAATTGCACGATATGATAATTTGAAATCAGTTCTGTCCAAGATCCAAAAGAAAAAATTGAGGCAAAAAAAGAAATTGGTCGTTGAATATAATACTCGTTCAAGGGCAAATTCTGTCTCTGGTTCCTTTTGACTTAGTTGTTATAATTTAGTTCTTTAAATTGTCTTATAATCTGTCTTTAAAATGGTTTGTGTTAGAGGTCTTCAAAATAGGATTCCCTATTATTGCTTTGAGTTCATTTTCTTTTCTTGCCAAGGGTATTGGTCTAGTCCCCCTTGGTCTCTTTTCTGTATTTTCTCTTTTTTTTTTATAAATACAATAAGGGGAAGTACTCTTTTTCTTTATTGATGTTTTCTAACATAAAAGGTTTTAACGATGCTCCATTCCTTTCTTTTTACCCAAAAAAGTCCTTAAAATTACATGATCTTATCAACTTAGTCCCTATATTATCTCAAAAGCTTCCTAGAATTGCAAAACATTAATTAGGTTCACGGACTATAATGACATTAACTTGATAATGTGTGAGATACATTTGAAACTAAGTGAACAATATTAGTGAAGCACTTGCCAATCATTATGGATCTAGATGACTTTGATTATTATTTCAAAAATCATTTTGAAATATTGATAATGTAAAAGACTAAGTTGACACATTCCATCAATTTTAGAGAACAAAATTAAGTACTATATATTTAGGCTCTGTTTGGATAGCTTTTAACCAATAGCTTATAGCAGATAAACTCGTAGAAGTAAAATAGAAGTGTTTGACAACCATTAGCTTATATATACAATGGCGGACCTATGTAGCTTTCGGGGGGTTCAGTTGAACCCCATGAAAAATAATAATTATACTAATACCTCTATATAAAATAAAATTTGAACCACCTAAAATTTTAAATTTATAGTAGTATCCTTAAATTTGCACCCAATTTGCACCCAATTCTTAATAAACCTATCCTATTAATTTCCACAATAAGAGACTATTTATAAAACTTAAGAAAGTAATTTGACCTATATTATATACTTTTACGGACTACTTCTAATTTTCATATACTTTAGGACTTAAATAGAAAAAAGCGTGTAAACTTAGAGTATAATTTGGTGATTTACTCTTAAATAAATTTGGAGTTGGATAACTTGATTCCTTAATTTTAATAAACTAAGTGAGGATATTTGAAAAAAAAATTAAACAAACCTATGATCCAACATTTTTTATAATGATTTTTTTTTGTACCCGTGACCCAAGGTCCTGGGTCCGCCACTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGCTTATAGTATTTTTCCATATGCTAATTGAAGTAACGTGTGAGTTTAGAGTTTATATATTTCATTTTTTTTTTTAACTCTATTATTTTAATTAAGTCCATTAGTTATCCTCCATTAAATTACAACCCCTCTCATGGTCGATTAACCATTTGGTCCTGGATTCGATCTCGTGTGTATGAAAAAATATTTTTTGGGAGAGATCAACCCCTTAAATGGACCTCCGATCCCTCGATGGATTAATCTCCACCGTCGTTGTGGATAATATCTTAGTTTGCAAAAAAAAATCGCTATATTTACAAGACCCTTTAAGTTCACATCGTTAACTTATCCACTATCAGTTATCCGCTAATTTATCTACTATCTATTAATTTATCTATTATCCACTATTTTTTACCCAACATGAAATTAATATTTGGAAGAGAGAATATAAAATTATTTGAAGAAAGAGAAGAAGAAGAAGAAGAAGAAACATAATACTCCTAGTGTTGGATATTACCCGACCCGCACTCATAACTTGCACACTCTCTCTCAGTTGGGCTTCCACTCTCCGCCTAGCAGCATCTCCCTCTCCCAGCAATTCACCAGCTAGTACACCTCCGCACCGTCCCACATCGTCTCATCGTTCCACCTTTTCTCAGTTTCAGGTTCTACTTTTCCCCATTTTCCCTTAATCTTGCTAGTAAGATTAACATTTTGCCCCTATTTCATTTTCCATCATTATATGTATAAATTCACTCTTTCAATTGTTGATTACTTTTCTTCTTTTAGTTTTTTATGATTTATTTTGCTTGTGCATGCGTAGGATTCGATTTTCAGTTAGGGTTTAGCATCAACCACTGTTAAGTCATAAATTCATTTTATCAACTAATCTAAGTTGTTTCAATTGGAAACAGCCAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF09173.14	eIF2_C	362	451	6.40E-33
PF00009.30	GTP_EFTU	32	236	1.70E-24
PF03144.28	GTP_EFTU_D2	268	350	4.20E-10

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0003924	GTPase activity	Molecular Function
GO:0005525	GTP binding	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0006414	translational elongation	Biological Process
GO:0003746	translation elongation factor activity	Molecular Function

InterPro

InterPro term	Description
IPR000795	Translational (tr)-type GTP-binding domain
IPR009000	Translation protein, beta-barrel domain superfamily
IPR004161	Translation elongation factor EFTu-like, domain 2
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR044128	Initiation factor eIF2 gamma, GTP-binding domain
IPR044127	Initiation factor eIF2 gamma, domain 2
IPR015256	Initiation factor eIF2 gamma, C-terminal

trEMBL

trEMBL term	Description
A0AAN9PZE9	_

SwissProt

SwissProt term	Description
IF2G_HUMAN	Eukaryotic translation initiation factor 2 subunit 3

KEGG

KO	Description	Enzyme
K03242	translation initiation factor 2 subunit 3

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G04170	eukaryotic translation initiation factor 2 gamma subunit
Medicago sativa L.	MsG0280009999.01.T01	_
Oryza sativa L.	LOC_Os12g41400.1	eukaryotic translation initiation factor 2 subunit gamma, putative, expressed
Cucumis sativus L.	Csa008305	_
Glycyrrhiza uralensis Fisch.	Glyur000482s00021735.1	_
Codonopsis lanceolata	Cl_chr04_55330T	_
Arachis hypogaea L.	AH15G12710.1	Eukaryotic translation initiation factor 2 subunit 3 like

Expression pattern