Detail information of Am06G021160.1 Annotation
Gene IDAnnotation
Am06G021160.1 ubiquitin-specific protease 25
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am06G021160.1mRNAChr06121279478121291259-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00443.32UCH353383.00E-52
PF13423.9UCH_1353201.00E-15
Gene family
Gene familySubfamily
Ubiquitin FamilyUSP

Gene Ontology
GO termDescriptionCategory
GO:0003723RNA bindingMolecular Function
GO:0012505endomembrane systemCellular Component
GO:0006397mRNA processingBiological Process
GO:0031967organelle envelopeCellular Component
GO:0045893positive regulation of DNA-templated transcriptionBiological Process

InterPro
InterPro termDescription
IPR018200Ubiquitin specific protease, conserved site
IPR028889Ubiquitin specific protease domain
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765Papain-like cysteine peptidase superfamily

trEMBL
trEMBL termDescription
A0AAN9KV04 _

SwissProt
SwissProt termDescription
UBP25_ARATHUbiquitin carboxyl-terminal hydrolase 25

KEGG
KODescriptionEnzyme
K11855ubiquitin carboxyl-terminal hydrolase 36/42[EC: 3.4.19.12]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G14400 ubiquitin-specific protease 25
Medicago sativa L.MsG0280009771.01.T01 _
Oryza sativa L.LOC_Os05g43480.1ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed
Cucumis sativus L.Csa017733 _
Glycyrrhiza uralensis Fisch.Glyur000426s00022729.1 _
Codonopsis lanceolataCl_chr04_22460T _
Arachis hypogaea L.AH18G19700.1Ubiquitin carboxyl-terminal hydrolase 25 like

Expression pattern