| Gene ID | Annotation |
|---|---|
| Am06G020840.1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G020840.1 | mRNA | Chr06 | 119342544 | 119345087 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 109 | 146 | 2.20E-101 |
| PF13041.9 | PPR_2 | 132 | 180 | 2.20E-101 |
| PF13041.9 | PPR_2 | 168 | 213 | 2.20E-101 |
| PF13041.9 | PPR_2 | 210 | 251 | 2.20E-101 |
| PF13041.9 | PPR_2 | 237 | 285 | 2.20E-101 |
| PF13041.9 | PPR_2 | 272 | 319 | 2.20E-101 |
| PF13041.9 | PPR_2 | 308 | 348 | 2.20E-101 |
| PF13041.9 | PPR_2 | 345 | 383 | 2.20E-101 |
| PF13041.9 | PPR_2 | 416 | 460 | 2.20E-101 |
| PF13041.9 | PPR_2 | 485 | 529 | 2.20E-101 |
| PF12854.10 | PPR_1 | 129 | 161 | 7.10E-97 |
| PF12854.10 | PPR_1 | 164 | 194 | 7.10E-97 |
| PF12854.10 | PPR_1 | 233 | 264 | 7.10E-97 |
| PF12854.10 | PPR_1 | 268 | 300 | 7.10E-97 |
| PF12854.10 | PPR_1 | 304 | 336 | 7.10E-97 |
| PF12854.10 | PPR_1 | 442 | 472 | 7.10E-97 |
| PF01535.23 | PPR | 240 | 270 | 5.50E-73 |
| PF01535.23 | PPR | 310 | 340 | 5.50E-73 |
| PF01535.23 | PPR | 449 | 477 | 5.50E-73 |
| PF13812.9 | PPR_3 | 156 | 213 | 4.60E-51 |
| PF13812.9 | PPR_3 | 226 | 282 | 4.60E-51 |
| PF13812.9 | PPR_3 | 260 | 317 | 4.60E-51 |
| PF13812.9 | PPR_3 | 331 | 385 | 4.60E-51 |
| PF13812.9 | PPR_3 | 434 | 490 | 4.60E-51 |
| PF17177.7 | PPR_long | 72 | 197 | 2.60E-34 |
| PF17177.7 | PPR_long | 184 | 314 | 2.60E-34 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009507 | chloroplast | Cellular Component |
| GO:0031930 | mitochondria-nucleus signaling pathway | Biological Process |
| GO:0008233 | peptidase activity | Molecular Function |
| GO:0051301 | cell division | Biological Process |
| GO:0006508 | proteolysis | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2XIU4 | _ |
| SwissProt term | Description |
|---|---|
| PP131_ARATH | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G79080 | Pentatricopeptide repeat (PPR) superfamily protein |
| Medicago sativa L. | MsG0280009685.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g35750.1 | pentatricopeptide repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa013735 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000090s00011399.1 | _ |
| Codonopsis lanceolata | Cl_chr04_51610T | _ |
| Arachis hypogaea L. | AH18G21150.1 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic like |