Gene detail

Detail information of Am06G019690.1 Annotation

Gene ID	Annotation
Am06G019690.1	Homeodomain-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G019690.1	mRNA	Chr06	110679006	110681190	-

Sequences

CDS:

>Am06G019690.1
ATGGAAAGAATGTTCCCTCCTAAGAAGCCCTCTACTATGAATTCTCATGACAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTCACCACTGATCCAAAACCTCGTCTCCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAACTTGGAGGACCTGATAAGGCAACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGGAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGCTTCAGCTTTAGAACTGCAACGGAATACTGCTTCCTCTTCTGCCATGATAGGCCGCAACATGAATGATAACTCACACATGGTTGATGCAATTAGGATGCAAATTGAGGTGCAAAGAAGACTGCATGAACAACTCGAGGTGCAAAAACACCTTCAGCTAAGGATTGAAGCTCAAGGGAAATACATGCAAAGCATATTGGAAAAGGCATATCAAACACTTGCTGGTGAAAACATGGCGAATGCTACAACTAACTTAAAGGGTATTGTTGGAACTCAAGGAATTCTTGACATGGGACTCATGAAAGAATTTGGTTCATCTCCTCTTAGTTTTTCATCTTTTCAAGATCTTGACCTTTATGGAAGTGGTAGTAGTGGTGAACTTGACCACCTTCAACAAAACATGGACAAACCAACCCTTGATGGATTTATGCCAATAAATGATACCTTATGTTTAGGGAAGAAAAGGCCTAACCCTTATAGTGGTAATAATGGAAAAAGTCCTTTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGATCATGCCTTGGAGGTCCTCAAGATGATCCTTTTAAAGGTGATAATCAAATTCAAATTGCACCACCTTCATTGGATGATCCCATTTCGGAGATTTATGATACAAAGCCTTTACTTCAAGGTGATGAAAAGAAATTTGATGGTTCTATGAAGCTTGAAAGGCCATCACCAAGAAGAGCACCACCTCTTCATGCTGAAAGAATGAGTCCTATGATCACTACTGGTACCATGGCACAAGGTAGAAACTCACCATTTGGGTGA

Protein:

Promoter(3k):

>AM06G019690.1
TTGGCCCTTCGTTTAATACTTCATTTGTGCCTATTGCTTGTGGTTCATCTCTATTAGTGGCTTGTTGCCTATGGTGACCAAATGCATCATTGACCATTGTGTCTAGCGGGTTCTCATAACCAAATATCCCTTGCACATGATCTTCATTTCTAGTAGATTGCGGTACTTGTTTCTCACCATGACGAGTCCATACGATATAGTTTTTAGGGAATGGTTTCGATTCTAAGTGTGATTGGACTATATCTCTGGTTTGCCAATCAACAATCCCGCAATCAGGACATGGACATTGTATTGTATCTCTAATAGCGCCATGCTTAAAAGCAAAATCCAAGAAATGACTTATTCCATTTAAGTACTCACTTGTATTTCTTGGCTTTGCAATCCAAGATTTGTCCATATTTAACTGTCGTTTAAATAATGATAAGAAGGTATAAAAGAAATTAAGAAAACCTCAAGTGAATTAACGATGGAGAACACTAGCAATACAAATAGTTGCAAGCAATACTATATGTCATATATCAGAAACTAGTAGGACTCATCTTTAAGAAAAACAAGAAATAGTGGTATGAAAAATCTGTCATATCTAGCTACAAGCTTTGAAAATGTAATTTCAACTTTTCGGTTTAAAAGACGACGACAACAATAAGCAACGACAACAGCAATAAGAGACACGACAATAAGCTACAACTCAGAAGCCTATAATTTAATTGAATTAAGAGGCCTATAATTCTGCAAAGTATGTTCAAAATATACATTGATTTTTATGTCTAGAGAGCACAACTCAGTAGTAAAAAAACACAAGTGTTATGTTTCGCAAGGCAAATAGACACTGATATTTCCAAAATTTAGCTAAGAAACTTGTAACACTACTGACTAACATCTAATCCTTTTCATTTATTCCAAATGCATCAAATGTAATTCAATTAGAAGACTAACACTATTTTCTAATTTCTAGGCAGTAATAGCTTAAAATGACATCCATTTCCGACCATTTCAGTGGCAGTTCCGGCGGGTGGTGGGTTTGACGGGAAATCGGGTGGGTTTTAACGGGTTGTTTCAATAATGGGTTAAATCTATTTTTCTACTAGAACTTAGCAGAAACACGGAATGATCAAACTCACTTTGTTTCTCTGCAACTAGAACACATTTGAAAAACTGATAAAAATATAGTTTTGAAAGCTAATCTATGACCAGCTGATCAGTTTACGTGTCCCACAATGAATAAGCTTTGGAACAAGTGATTATAATGACTTGACAGAAAGTTAGCAAAAAGTAAAACAGGAATGAGTGCAGTGCAGCGGTGCAATTAGTAGAGTAGTCAAAGTGCAATAAAAAGGTGATAGTAGAAGGCATCTGTTTGACATCGGACGGTTTCGGGTATCACTGGCCTTGTATTTGTAAAACCAAAACTGACCATTTTAACCCAATACAAACCAATTTCTGTCACTTTAACACCCGAACCCGCACTGACCCACCCGGAATTTCGGTTTTTTCTGTTGACGGGCGGGTTACAAAATTTGTCCACCCCTACTGAATATATGCCAAGATACTTATTATATAAAATAAACAAAAAAAACCTGTCAAATACATGATTGACAGGAAATCGGGTGGGTTTTAACGGGTTGTTTCAATAATGGGTTAAATCTATTTTTCTACTAGAACTTAGCAGAAACACGGAATGATCAAACTCACTTTGTTTCTCTGCAACTAGAATGAACGAAGCGAAAGAAAGAGGAAGAAGACAATAGCATATATTATTGATTTAATTAGAATACACTTGAAAAACTGATAAAAATATAGTTTTGAAAGCTAGTCTATGACCAGCTGATCAGTTTACGTGTCCCACAATGAATAAGCTTTGGAACAAGTGATTATAATGACTTGACAGAAAGTTAGCAAAAAGTAAAACAGGAATGAGTGCAGTGCAGCGGTGCAATTAGTCGAGTAGTCAAAGTGCAATAAAAAGGTGATAGTAGAAGGCATCTGTTTGACATCGGACGGTTTCGGGTATCACTGGCCTTGTATTTGTAAAACCAAAACTGACCATTTTAACCCAATACAAACCAATTTGTCACTTTAACACCCGAACCCGCACTGACCCACCCGCAATTTCGGTTTTTTTCGGTTGACGGGCGGTTACAAAATTTGTCCACCCCTACTGAATATATGCCAAGATACTTATTATATAAAATAAACAAAAAAAAACCTGTCAAATACATGATTGAAAGCTTTTTCATGGTAATGACACAAAGACAAAGTCAGTTACTTTCCATTATTACCATTGTAGCCGAGAGGCCACACAAAGATGTTGGTACTAATAATTATGCTAAAAAGTGTGTCGTACCACGAAATACCCCATGTATGCATAAACAGCCAAATATGAGATTATGTTCATAATAACCCATTCAACAACCTTTGTTCAATAATCATACATAAGAGGCATATAGTCTATATTTTCCATCATGACCATCATCATTGTATTTGCATATATAAGGACTTCCTTACAATGATGCCTCCAAAAAGCTACCTATGTATATAACATTTAACTTAATAAAGGGTATCTGCATGATATAGTAATCAAAATGGTATATATATATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGTGAAGTGTCTTTTGACAAAGGAAGGTCTGCATGTTGGAATAGGGTAGCTTTATATTTTTTATATAAAAAATAAATAAATTCGATAGTATTAAATACATTCTTTTTAAGTAAGGGTAGTTCCTTCTCACATGCTTTATACCTGAGGAGGTAACCAAAGCCGTTCACCACCTTCTCTCTTCTTCAAAAAACGCACCCTATTCTTCTTCCCAATTTTGCATCCGCATTTGTTCTTGAATCTCTTTGGTATTCTTTCCTTAGAGTCTCTCACCAGAAAAGTAAGAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF14379.9	Myb_CC_LHEQLE	134	179	2.90E-24
PF00249.34	Myb_DNA-binding	38	86	1.00E-06

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	CE8

Gene Ontology

GO term	Description	Category
GO:0003677	DNA binding	Molecular Function
GO:0009877	nodulation	Biological Process
GO:0010089	xylem development	Biological Process
GO:0010088	phloem development	Biological Process
GO:1902680	positive regulation of RNA biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR044848	PHR1-like
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain
IPR006447	Myb domain, plants
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A8B8KE82	_

SwissProt

SwissProt term	Description
IPN2_LOTJA	Myb family transcription factor IPN2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G79430	Homeodomain-like superfamily protein
Medicago sativa L.	MsG0280009507.01.T01	_
Oryza sativa L.	LOC_Os02g07770.1	Myb transcription factor, putative, expressed
Cucumis sativus L.	Csa007684	_
Glycyrrhiza uralensis Fisch.	Glyur000308s00025268.1	_
Codonopsis lanceolata	Cl_chr04_50920T	_
Arachis hypogaea L.	AH18G23480.2	Myb family transcription factor APL like

Expression pattern