Detail information of Am06G019650.1 Annotation
Gene IDAnnotation
Am06G019650.1 Ca(2)-dependent phospholipid-binding protein (Copine) family
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am06G019650.1mRNAChr06110220909110226313+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF07002.19Copine1193308.20E-73
PF13920.9zf-C3HC4_33844242.90E-09
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0016567protein ubiquitinationBiological Process
GO:0005634nucleusCellular Component
GO:0004185serine-type carboxypeptidase activityMolecular Function
GO:0016020membraneCellular Component
GO:0006508proteolysisBiological Process

InterPro
InterPro termDescription
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR002035von Willebrand factor, type A
IPR036465von Willebrand factor A-like domain superfamily
IPR010734Copine, C-terminal

trEMBL
trEMBL termDescription
A0A151QXI5 _

SwissProt
SwissProt termDescription
RGLG4_ARATHE3 ubiquitin-protein ligase RGLG4

KEGG
KODescriptionEnzyme
K16280E3 ubiquitin-protein ligase RGLG[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine) family
Medicago sativa L.MsG0280009469.01.T01 _
Oryza sativa L.LOC_Os08g04130.1copine-6, putative, expressed
Cucumis sativus L.Csa007665 _
Glycyrrhiza uralensis Fisch.Glyur000308s00025260.1 _
Codonopsis lanceolataCl_chr04_50900T _
Arachis hypogaea L.AH18G23790.1Uncharacterized protein like

Expression pattern