| Gene ID | Annotation |
|---|---|
| Am06G019550.1 | ABC transporter family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G019550.1 | mRNA | Chr06 | 108452575 | 108459556 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF06472.18 | ABC_membrane_2 | 119 | 376 | 2.80E-54 |
| PF05992.15 | SbmA_BacA | 157 | 425 | 5.80E-19 |
| PF00005.30 | ABC_tran | 486 | 686 | 4.40E-18 |
| PF00664.26 | ABC_membrane | 130 | 395 | 3.30E-06 |
| Gene family | Subfamily |
|---|---|
| Transporter family | ABC |
| GO term | Description | Category |
|---|---|---|
| GO:0055085 | transmembrane transport | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| GO:0009507 | chloroplast | Cellular Component |
| GO:0016887 | ATP hydrolysis activity | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR017871 | ABC transporter-like, conserved site |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
| IPR011527 | ABC transporter type 1, transmembrane domain |
| IPR003593 | AAA+ ATPase domain |
| trEMBL term | Description |
|---|---|
| A0A1S2XFJ1 | _ |
| SwissProt term | Description |
|---|---|
| AB2D_ARATH | ABC transporter D family member 2, chloroplastic |
| KO | Description | Enzyme |
|---|---|---|
| K02471 | vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G54350 | ABC transporter family protein |
| Medicago sativa L. | MsG0280009577.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g11946.1 | ABC transporter, ATP-binding protein, putative, expressed |
| Cucumis sativus L. | Csa007690 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001807s00034284.1 | _ |
| Codonopsis lanceolata | Cl_chr03_47240T | _ |
| Arachis hypogaea L. | AH18G24750.1 | ABC transporter D family member 2, chloroplastic like |