Gene detail

Detail information of Am06G019300.1 Annotation

Gene ID	Annotation
Am06G019300.1	beta-hexosaminidase 2

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G019300.1	mRNA	Chr06	105860908	105864094	+

Sequences

CDS:

>Am06G019300.1
ATGTCATCACCACTACTACTATTGTTGTTTCTGTTGTGCCTAGTAAATGCAGAATCAACCACAACCACCACTATCATCAACGTTTGGCCCAAACCAAGAAATCTCACATGGGCCCCACCACACCAATTCACACTCCTCTCTCCAACATTCACAATCACAACCACCACTCCACACAACAACAACCACCTCTCCGCCGCCATCAACCGCTACACAAACCTCATCAAAACAGAACACCACCGTCCCCTCGTACCCCCACCGCCACAACCAACCAACTTCTCCCAACCACCACTCCAATCCCTAACAATCACAATCAAAAACCCCAACACACCCCTCACTAACGGCGTCGACGAATCCTACACACTAACAATATCAACCCCAACATCCACACTAACGGCCGTAACGGCATGGGGAGCAATGCAAGGTCTAGAAACATTTTCCCAACTAGCATATGGAAACCCAACGCGCGTGGCGATTGATGTGCGTGTATGGGACGCGCCTCTGTTTGAACATCGTGGGGTTATGCTTGATACGTCGAGGAATTATTATCCGGTTAAGGATTTGTTGAGGTTGATTGAGGCGATGAGTATGAATAAGGTGAATGTTTTTCATTGGCATTTAACTGATTCTCATTCGTTTCCTTTGATTTTGCCTTCGGAACCAACGTTGGCTGAGAAAGGGGCTTATGATGTAAATATGGTTTACACGCCGGAGGATGTTAAAAAGGTTGTTGATTTTGGACTTGATCGTGGGGTTCGCGTTTTGCCTGAAATTGACTCCCCTGGGCATACTGGATCTTGGGCCTTAGCCTATCCTGAGATAGTAACCTGTGCCAACATGTTCTGGTGGCCAGCTGAAAGCGATTGGCCTGATCGACTTGCCGCAGAACCCGGAACCGGCCACTTGAACCCCTTAAACCCCAATACCTACAAAGTCCTAAAGAATGTCATCCATGATGTTACCACAATGTTCCCAGAACCCTTTTACCACGCAGGTGCCGACGAGGTCGTACCAGGTTGTTGGAAAACCGATCCAACAATTCAAAAATATCTGTCCAATGGTGGAACTTTGAACCAAATTCTTGAGACATTTATCAACAACAGTCTCCCTTACATTTTATCGCTCAACCGCACAGTCGTCTATTGGGAAGATGTTTTACTAGATGATGCAGTCCATGTCGAATCAACGATTCTCCCTACGGAACACGTGATTTTGCAAACATGGAACAACGGACACGATAACACGAAACGAATAGTTTCTAAAGGATATCGCGCCATTGTGTCGTCATCAGATTTTTATTATCTAGATTGTGGGCATGGTGAATTTGTTGGGAATAACAGTGTCTATGACAACCAAACCAGCAGTGATACAAACAACGGCGGCTCGTGGTGTGGACCTTTTAAAACGTGGCAAACGATTTACAATTATGATATAACTTATGGATTGACTGAAGAAGAAGCGAAACTGGTTTTGGGTGGGGAAGTGGCGTTATGGTCAGAACAAGCTGATGAAACTGTTTTGGATTCGCGAATTTGGCCGAGAACTTCTGCAATGGTTGAGTCATTGTGGTCGGGCAATAGAGATGAAAAGGGTATGAAGAGATATGCTGAAGCAACAGATAGGTTGAATGAATGGAGAAGCAGAATGGTGAGCAGAGGTATAGGAGCTGAACCTATTCAGCCACTTTGGTGTGTTAGGAACCCTGGAATGTGCAACACAGTGCGTCCAATATAA

Protein:

Promoter(3k):

>AM06G019300.1
GTTCCATATGGGTGGAGAGGTGATGGCATCTCTTCGTCGCTTCAATGTCGGCAGTTATCGTTATGACCTCGTTTTTCAACGAGTAAAGTTTCATTTTAGGGTGTGCGGTGGAAGCGACCGCTCCCAACCTCCCTAACGTCGGCCTTCCTTCCAAGGATACAGTTTGTAGGGGGACTTGCAGGACAGGACCAGAAATTGGCTCCTTACTGTGCGTGAGAGGTTTTTTTCGCTGTACGTCACCATGAGTTCGACGTAGCCTTGTGGTCGAGCCTGGTCTCCATTAAAATTGGCTAGGTCAGAACTTTGGTATAGAGTGAGATCAGTCTCTGCAATTTTCAAAATACCAAGGAAATCTGCAAAAATATGACGTCGGCCGAGCTCCCTTGGTCCACAAGGATATTTTTTACATCAACGCCGAGCATTACGGCCGACACAATCAGAGGTACGTACTTGTTAGGTTTACTAGTTAGCAGATCTTGATTAAAGAAGGTCAGCGCCGACTTGCCCGAAGGTGCTGCTGGGGTCGGATTGTTGGCGGCACTTAATATCTCTTTCCATTTCCGCTTCACAGAGCTCTTCGTTTCCTTGATGTCGACGGAGTATCTCCCACTAATTGTCATTGTGCTAGGCCGAAGCCGGCACTGCCTTGACCCGTGTTCAGGCGAGCTTGATGGTGAAGACGACGCTTCCTGTGCAGAAGTTGATAGGAGGTCGACCTCGAGGAGCCATGGGAAGGGATGGGGGTTTGGTGAGAGCCAGTGATATGCTCCCACTATGGTCGTCAGTGTTCTGTACCTTGCTATCAGGATAGAGATCCGAGGTTGCAGTTGGTAGAGGTGTTAGTTGAAGTCGCGCTCTCCATGGCTGAGGTCGGATGAGTTTTCTTAGAGTAGTCTTCCCTCGAGGTTGAGCTCGGCGGGGTCGATACCTAGAGACACTGCGATGCCAAAGTCAGCAAATAGAAGTGAATGAGAGGTACTTATGAGAGAGCGTACCTGATTTTGTGGGGTGGTGTTGTATTTATAGACGCGGAGAGGGGGTTGCGCCTCACCTAGGTTGAACCTGGGTTGTTGGATCAGTCCGTGTCGATCCTGGCCGTTGATCTCGGCGTCGCCTCTGTTAGCCGATGTTGGGCCGGATCCCGAGGTGGATTGGGCCGCTTTTTGTATAGATTGGGCTGCTTGGCCTAGTCCAGAACACTTAGTAAGGCTATATCTTTAAGGGTTGCACACCCCCCCACCCATGTTATATATCAGAACAAAAATAATGAAATATTAATTTATAAATTTTAACTTTGAAATAGCTTTTTTTGGTTCGGACCATCGCTGCCTACCCACAGACTGTGCCAACCCTTTCAACGAAAGACTAATCTCCACTCGTGCTTAGTATCAAATTTCGCACTGGCCAACACCGGTTTGTCCACTGCGGGAATCGAACCCGAGAGCACCGGGTCGACCCCCTGTGTCCCAGGGTAGATTAAGCCACGGTGTCGGTTTACTTTGAAATATCTTAATGTTAGTTTATAAATATTTTGTCATATTTTATAATGATTAAATAATTTAATCATGAATTAAATATGTCATTTTACATTTATCGGCTAAATTAACCGCTAGTTTTACCAAATACATGATTTGCTATCAATTAGACTAGATTATCGGTTAGCTCATCCGCTATCTACTATCATTCGCTATGCATTAGCTTATCCGCTATCCACTACTTTTTATCAAACATAATCCAAATTGTCTATTCACTCAAAATAAAATCATAAGAAACCCAGGGGGTGTGGTTGAGAGGTTGGGGCTCATCCTCCCTTAACCAAGTGTCGAGGGTTCGATCCTCGCCGTGGGTATGGAGCAGCTTTAAATCCCTGGGCCAGCTGTCTCACCCTTCGAGGTGCCTCCAATCCAGCGAGGGGATTAGTCACTGCGTTCGGTGGTGAATACCCTGGCCTCGACAAAAAAAAATCATAAGTTGTATTTATCAAGGTTTTAAAAACCGGACCGGACCGGCCGGTTCAACCGGTTGAACCGGGAACCGGACCTCTGGCCGGTTGGTTCAACCCCATTTGAACCGCAGGCCAAAGAACCGCCCAGAACCGGATTGAACCGCCAAGAACCGCTTTGAACCGGGAAAGAACCGGGAACCGAACCGGGTTGAACCGGTTTGAACTGCCCGAAATGCAATTTTTTATTTTTAAATTTACTTTTTTCTCCAAAATTTAATATTTTTTATTTTTTATTAAATAAATTACTTATCCGGTTGAACCATGAACCGGAGGTCTCGCCGGTTCGATCTCCGGTCCGATTTTAAAAACATTGGTATTTATAGCAAATGCATTTATAGCATTCTATCAGTAAAAAAGAGTAAATAGCATTTAATGACATTAAATAATTATATATTTTTTTCGGACCATTGCTGGCTATCCACGGAGTGTCCACGCTTTTAACGAAAGACTAATATTTACTCGTGCTTAGGATCAAATTTCGTATTGACCAACATCGAGTTTGTCCATTGCAGGAATTGAAGCCAAGAGCATCGGGTCGACCCCCGTATCCCAGGGTAGATTAAGTCCCTCGACTATCTGTGTTGGTTTAAATAATTTTATACTTCAAAAAACAAATATGTTTTCCCAGTTGTTTTTAGTTTTAAAAAAATTAAAGCAACAAATAATCCAAATTTCACCCGGCAAATAGGTGAATGAATAAAGTAACCAAAGGAGACGTCAAATGCGCATACAGTGTTGCCAAGAAGCAAACAAAGAGCTGGAAAAACAAAGAAGTAGCGGTCCTAAGAAAGAACAAGCTCTTGTTGACTCTTAAACCAAAAGTCCTTCTATTCTTAAAATTAGACACATCATCATCATCATCATCTATCTCCTTATATAACAACACACACATGCCCCTCAATAGCATCCCCCAATCACATTGCAAGTTCCAACAACATCATCACACTGTTGAGTGTTAACAACGCCAACAATAACATCATCGTTATCATCACATC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00728.25	Glyco_hydro_20	168	524	5.10E-99
PF14845.9	Glycohydro_20b2	28	148	2.00E-20

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH20

Gene Ontology

GO term	Description	Category
GO:0004563	beta-N-acetylhexosaminidase activity	Molecular Function
GO:0030203	glycosaminoglycan metabolic process	Biological Process
GO:0016020	membrane	Cellular Component
GO:0005975	carbohydrate metabolic process	Biological Process

InterPro

InterPro term	Description
IPR017853	Glycoside hydrolase superfamily
IPR015883	Glycoside hydrolase family 20, catalytic domain
IPR029018	Beta-hexosaminidase-like, domain 2
IPR029019	Beta-hexosaminidase, eukaryotic type, N-terminal
IPR025705	Beta-hexosaminidase

trEMBL

trEMBL term	Description
A0A9D5BKP9	_

SwissProt

SwissProt term	Description
HEXO2_ARATH	Beta-hexosaminidase 2

KEGG

KO	Description	Enzyme
K12373	hexosaminidase	[EC: 3.2.1.52]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G05590	beta-hexosaminidase 2
Medicago sativa L.	MsG0280009412.01.T01	_
Oryza sativa L.	LOC_Os07g38790.1	beta-hexosaminidase precursor, putative, expressed
Cucumis sativus L.	Csa024395	_
Glycyrrhiza uralensis Fisch.	Glyur000556s00025912.1	_
Codonopsis lanceolata	Cl_chr07_12590T	_
Arachis hypogaea L.	AH18G24570.1	Beta-hexosaminidase 2 like

Expression pattern