Gene detail

Detail information of Am06G018950.1 Annotation

Gene ID	Annotation
Am06G018950.1	homeobox from Arabidopsis thaliana

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G018950.1	mRNA	Chr06	103308018	103310212	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM06G018950.1
ACATCAATAACTTTAATAAAAACTTTAATTCACAAATGTTCTGAGATGTTTCTAGTTGATCTCGCAAGCAACACGCGTGTGTAACTAGCGGTGTTTACCAAAAATCACGGTAAACATGTTGCATCAACGCCGTAGCATCGCACTAACGTATATATCCCACGTTGCCTTGGATGTGGTCACCTCAGCAATTTTCTCAAACACTTTCGCATCGACGCACTAATGGATGAAGAACATTGCTCTTTGATCCTTTTTCCTCACTTCGCGATGTGTGTTCCTGTGCGCTTCAGTTGCGTTCTCTGCTAACGCATCGAAGCCTACATTGATGATCACAAGCACATCTTGAGCGCCAATTAGAACTCTCATTTGAATTGACCAGCGATTCCAGTTCTTGTCGTCGAACACAGGCAAGTCCGTATTAAATCCTCCATTTCCGTTAATCGTTCCTGTCTCAGTGTATCACTCAATTGAATTTCCTGGCAATTTCCCATGTTTCCCAACCCTAGGAAACAAATTCATGATTCCTTCTAAATTTCGAATTGCAATTCGATGCGAAATGCAGAAATGAAATTGCACACACTCCTCACATTAATTGAAATCCACAATCACACTCGTATTTCCCGAAATACCTAGAATTTGAGGCTTTAGATACCAATTTGTTAGAGCGTAGAATTCATTTCGCAGAGAGAAAACAAAGGAAAATGAAAATCTTTTATTATTCAACTGATAAAACTATAACAAAATTACAAATGGCACTATATATATATATAGTGCAGTGTCATAATAGAAACGTTTACCAGATCTAATTGCTGAACTAAAACCGAATAACAATATGACTTAACTAAAAAAGGAACTAAAGTAATGCAGTAGCTATGAATTAGTAGACTTACAACAGAATTTAGAGGGATCCCTCAACCTCGCTCTCGTTGTCATCCACATGTGACGCTACACCCATCACAGCACTTCGCACCACCCAAACCACCATGTGAGTCCTACGATGGCCACCCACCCACCATCGAAACCCACTGAAATCCCATCACCGTATGACGCTTCATTCCCTCATAACCTCGTCTAATGGTTGGCACCCTAGTGACATTAATTGAGCACCTCCAAAATAACCGATGGTCAACACCCTCTGTCACTGGTGCACGAACAAAAGGGAAATGGTGTTGAATGTTTTTTCCTTTTTTTTTAAATTATTTTTGTATAAAACCTCAATCATTAGATTAATCCAACGACTGCAATTGATGCAGTAAAGATTTGATGTAGAGAACTTGCTGTTGAGGATCCAATTCCTCCCACCCACCCATCTATCTCCTGAATGTCAAGAATTTGGATCCTCTACTGTAGAGGGTGCAACAAGTTGTTGCGCCATTAGATCTAGAGAGAGAAAGTTGTTGCGCCATTCTCTCTCTAGATCTAACGGTGCAATAACTTGTTGCACCCTCTACATGCTATAGAGGATCCAAATTCGAATGTCAATGGCTATGTCCATGCTCAATCTACATGACGGTCACGCGCCAAGCAAAATTCTTTAGGGGAATAATGTTGTCGATACCAACCAAACTACTCCAAAATCTACACCAATACATGCTCTCTATTAGTGCTATGAGTCTGACTTATTGTACTAAACATTTGTTTATTAATTTTTACTAAAGGGCTATAGAGATAACTTCCATAATAATTAAAAAAAAGCTTAAACAAAATAAGAGAAAATCTTAATTAATGAAACCCAAAAATCGTGGAACCGTTTCCTAAATCTTGGAGCCGTTTTATTTGGTAACTAACCAAAAATCGTGGACCTGATTTTTTTCACACAAAAATAAAACTTTGTTCATTAACCACAAATGTACATAGCAATGGTTAGTGGCCACTAACCACTAATGTGCATAGCAATGGTTAGTGGCCACTAACCACAGATATGCATAACTGTGGTTAGATGTCATTGACTAGATGCCACTAACCACAAATGTGCATAGCAATGGTTAGTGGTCACTAACCACAAATATGCATAACTGTGGTTAGATGTCAATTGTTAGATGTCACTGACCCCAAATGTGCTTAGCAATGGTTAGTGGCCACTAACCACAGGTATGCATATTTGTGGTTAGATGCCTCTAACCACAGTTTTGCATAACAATAGTTAATTACAGCAAAACCAGTCTGGAGGAACCAACCTGCAGAACATGATTTGAAGCAAAAAGAAGAAGATGATGAAGAATTGCAAGTCGAAAATCTTACAGATATCAAAATCTGTAAGATGATTAGAGCAAAGCAAGAAGAAGGTGAAGAGAACATAAAGATAGAAAATGCAAAGAACAGAAAGAAAGAAAGAAAGAAAGAGAAGAGAACAGAAAATAAATAAAAAAGTGCAAAAAAGAAATGTGAAAAAAGAAAGAAGAACGAGAAAGAAGAAACAAGATAAACGGAACGTAAAAAAATGGTTTGAATAAGTTTTAGATTAAATTTAATTAAAACCAATAACATTCAAAATTACAACAATGCCCTTATTCAATAAAAACCATTAGATTAAATTTCATTAAAAGATTGAGCATCCAATAACGAGATACCGAGGAAAATGCTTCCTACTATCTATCTATCTATATTCAAGGAGCATATGAGGATCTATATCTACCATAAAAATAGGTTGTCACGTGTGTTTGTCAACCTTGGTAACCTTTGTCGGTCAAATACCCTTTTCCATCCACAGTTTTATTTTATATTTTTATCTAAACATTCAAAAGTACTCTTAAAAGAAAATAAAAAAAGAAAATACCCACTACACATACTATTATTTTTTTAAAGAAAGCGACCATTTTGGTCTTCCTATGATCACATTGGACTCTCTCTCTCTCTCTCCTATCTATGATTATAAAGACTCTTCTCTTTCACCCTTTCCTCCTCATTTCTCAGTCTATACCACGCCATCCTCTCTCTCTATCTCTCTCTCTCATTATATATATCCTCTTCCTTCTTGCCTATGCATAAGAAGAGAAAGAGATC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00046.32	Homeodomain	153	207	8.60E-16
PF02183.21	HALZ	209	243	1.70E-10

Gene family

Gene family	Subfamily
Transcription Factors Family	HB-HD-ZIP
Transcription Factors Family	HB-WOX

Gene Ontology

GO term	Description	Category
GO:0006357	regulation of transcription by RNA polymerase II	Biological Process
GO:0005634	nucleus	Cellular Component
GO:0043565	sequence-specific DNA binding	Molecular Function
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0003690	double-stranded DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR003106	Leucine zipper, homeobox-associated
IPR009057	Homeobox-like domain superfamily
IPR017970	Homeobox, conserved site
IPR001356	Homeobox domain

trEMBL

trEMBL term	Description
A0A9D5GYB5	_

SwissProt

SwissProt term	Description
HAT14_ARATH	Homeobox-leucine zipper protein HAT14

KEGG

KO	Description	Enzyme
K09338	homeobox-leucine zipper protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G06710	homeobox from Arabidopsis thaliana
Medicago sativa L.	MsG0780040594.01.T01	_
Oryza sativa L.	LOC_Os08g36220.1	homeobox associated leucine zipper, putative, expressed
Cucumis sativus L.	Csa012151	_
Glycyrrhiza uralensis Fisch.	Glyur001887s00036743.1	_
Codonopsis lanceolata	Cl_chr07_37880T	_
Arachis hypogaea L.	AH18G24160.1	Homeobox-leucine zipper protein HOX27 like

Expression pattern