Gene detail

Detail information of Am06G018790.1 Annotation

Gene ID	Annotation
Am06G018790.1	Mitochondrial transcription termination factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G018790.1	mRNA	Chr06	102103037	102105030	-

Sequences

CDS:

>Am06G018790.1
ATGGGGTTAGAAGCAACAACACGCATCAGAACTACAAACCTGTTTATCTACCTCCTAAACACTTCAAATTTCTGCACAATTTCAGGAACATCTCATCTACAAAATCACCCAACATCACATTACAGAAAACAAATTTCACTCGCTAATCTCTTCCAATCCTTCGGTTTCCCTTCTTCTCAACTCCACAATTTTCTCTCTCACAATCACTTCCTCTTCAATTCCAACCCCTCCGACCTTCGAAATTCCCTAACAACCCTCTTTTCATTCCGAATTCCCCAAAATACCCTCGTTTCTCTCATTCGCGATTGCCCCTCTGTTTTAGAACCCCGTTTTCTCCACAACTGGGAATCGTGTTTCACTGAATTGAAATCCCGCGTTCCAAATTACTCTCCTTTGATGATCGCGAGTTTATTGCGATGCTCTAGAAAGTTCCATAATGAACCCGTTGAGCTCTTTCGAAAAATTGAGGTTTTTAGGGGTTTAGGGTTTTCTGATAATGTTGTGGCTAGGGTTTTGGAAGTGTTTCCTAGTGTGATTGTGATGGGGGAAAGCGAAATTGTTGGTGTGGTTGATTTTCTTGTGGGGGTTGGTGTCCCTAAAGATGAAATTGATAGGGTTGTTCGTTTGTTTCCTAGGGTTTTGGGACTTGGGGTGGAGAAAACGTTGAAGCCTTTGATTGAGGAATTGAGGGGTTTAGGATTTTCTCGTCGCGAGATTAGAACGGAGATGGTTAGGGATCCGAGGATTTTGGGAATGGAAATTGGGGAATTTTCGCGGTGTTTGAAGTTGCTGGAGACTCTAAAATGCAGGGAAGCTATTAAAGATAGGATTTTTGAAAAGGGTTTGCTTAGGGCTTGTTTTGAAGTGAAGCTAAGAGTAGATTGTTTGTGTAATCACGGTTTGATTCGAAGAGATGCTTTGAAGATATTGTGGAAGGAACCAAGGTTAATGACTTATGATTTGGATGATATTGAGAAGAAGATTGAGTTTTTAGTGCATAGGATGAAATATAGTGTTGATTGTTTACTTGAGGTTCCTGAATACCTGGGTGTGAATTTTGAGAAACAGATTGTTGCTAGATATAATGTGGTTGAGTATTTGAAAGGAAAAGGTGCAATTGGTTTTGAGATTGGATTGAAGGATATTATCAAACCTACTAGGCTTAGATTTTATAATCTTTATGTTAAGCCTTATAAGGAGTGTGAAAAAATATATGGGAGATTTTCAGGAAATGTTGAAGTTAAAAGGAAGCATCCACCTGGACTTTGGAAGCTCTTTAAACCACAGAAGTTTACTCAAACTAATGATGATGTGAAGAACATGAAGGCTTTCATGGACTCACTGGTGTAG

Protein:

Promoter(3k):

>AM06G018790.1
TAACTCCCAAATTACTAGCTTAAATTAGTAAAATGCTTTCAAATATGACAAAATAAGAGAGCGTGTGTTATGTCATGTCACAACTCACATTAGTAATGAAATAAACCAAGAAGAGTAATGAGTTCTCTTGAATGAGAAATAGATTTGTGTCTAAAAAATTTGTAGATCTCGATTGTTAATCAAGATCGAATAATCAACTACTCAAAATACAAAATGAAACAAACCAAAGAGAGTAATGAACCCTGTCGAATGGGAAATAGATTTGGTGTAAAGAAAACTTATAGAACTCGACCTTTTATTAAGATCAGACGATTGAGATTAAGAATTTTCGATTTGGCTCAAATCATAAAGTAATATATTCACACATAAAAAATATGAGCACAAAAAAAAGTAGGAGACCGTGTGTACAAACCAAATGCTAAAAAAGAGAAGTGAAACAAACTAAGGAAAGAAATGAGACCTCTTGAATGGGAAATAGATTTGGTGAAACTTAGAGCTCACGACTGCTGATCAAGGTCGAACTCTGATTTGCTGAATCACAAAGTAAATCGGTTCGATCTATATATGATGGCTTATATCGACTGACTATAATGATGGCAAAGATTACTATTTAAACTATCTTGGAAGCCGGTCTCGGTTGTGGAAGATGGGTGAGATGCTACCGATGTTGAATATCAGACTTGTTCCAAGTGATGTTCCGTCGCGCTAATCTGGCGAGGGGGTAGTACCTGCACACACTCGGCGCTATGGATCGTGGATATGGGCCGCTATGGGCGGCCCAAGTCCGAAATGGCGAAGCCCAATTCTGAACAATTTACCCCCAAGCTGGGGTCATTTTTGGTAGAATGGCCTTGGCTTGAATGTTCATGTTGAGACGGGTTTCCCCTTGGTTTGACCAATGAAGTCGACTTGCCCATTGGTCTTGCTGAGACAGGTTGCAAAAATTTCTCTATTGAGTTGGTTTTATTCCTTGGTTCCGAGATGTATGTCGACCAAATGAATTGTCCCTGGGGTATGTCAGTGGGATGAGTAGATTGGTCACGTCACTCTTGGATAGTAACCATTATGGATTCCTGTTTCTAGGTTTCGAAGTGACATGTCGGCCCGTTGCCTTGCCCCCCAAGCATATCAGGGCGGGCAAAGGAAGTCGGCCACGTTGTCGACTAGTAGTTCATGATCGGCATGGTATTTGAATTTTGACGGTTGGATTTATTTGTGATGATTGGTTGTCAACCATTGATGTGATTGGTGACATTTTATTTCCTTTAGTTGATTGAAGAGTCATGTCATTATGACTATGTCTGCGCTCCCTCGTTTTCTGTACCAATGCCATCATTACCTTTTACGATTGCATCCGTTGGGCTTTGACCCTCTATATCCCGTCGCCACGCCACACTATAAATAGGGAGGACCCCCCTCCTCATTTTTATCTTTGCGAAATTTGCGCTTCCGCCTTTTCTCTCTGCCGACATCAAATAGGGAGGACCCCCCCTCCTTGAGGATTTCTTTGAGCACGTATGTCCCCCGACCGAGGTGTACTTTTTTGTGGCGCAAAGTGAAAAGTCGATTTTCTATGGCTAGATCAAAGTCTACGCCAAAGATGATTTCCTTGCACCACCGAGTCGATATGCCAAGGAGCGCGATGCCGAAGATGTTCAACGGGTCCAACAAGGGCTCGAATACGGCATAGCAGACAACACATCTGGTCGAGAGCTTTTTGATAGTCATTCAGAGGATAGTGTCGATGCCCGGGTCTTTCTTGAAATGAGTGATGATTTGAGAGGACATGAGACTGACACAAACCAAGCCGACGTGGATGAAGACCGAGTAGGGATACCTGAGGAAAACAATGCGGGGGAGATGCCAAGAGGCGAGGTAGGTGTTGAAGGCAATATTGTTATCAGTTATGACTGGATTTCTGACGAGGTCCAAGGGACATTGAGCAAATTTTGTCCTGGCTCGTTATATATCAACGTTCCAACAAAAATACTTGCTCTAAACGTGTTTCCGGGTATTCCTTTAGCATTTCATCCAAAAGGATTGGGGAAGATCAACAGTGGCAGGTGCAAGGTGTTCTCCCATCAGAGCCTGATTGTCATTGTCCGCACAAAGGACTTCGTTTCTTTGTATATGCAATAATGCTCTCCGAGATGGGGGCCTACCCCCCATTTACTGAATTTGGACAATGGGTCTTGAACAATCTTTATCTAGCTTTCATGCAACTACACCCCAATGGTCGGACTTTCGTGAGAGTCTTTCAGATAATGATGGACGTCTTTGAGCATCCTTACCTCGTAGAGCTTTTCTTGCATTTGTTCAGTGTCTTCAAGATCTCGCCAAAGGCTGCTCGGAAACCCTACTCCATAGACCTTCACTCATTCACGTGAAAGCGTCCTTACTCAGTAGACCTTCACTCATTCACGAGAAATTATAGCTTGTTAAATAAGTCAAACCCTCCACTTCTACCGTTTCAAATTACAAAAATGGTACCAAAATAAATGACTTGGGGCCAAAATGGTAATTTTTTTCTTGTTACCATGTTATTGGCGTACGGTATCCATCAACTTTGACGTGACTAATTTATGTCGGGGAACCTGGCTGACCAGGTGTGTCTGGCTATGCCGATCCGTGTGGTTCTCCCATCCCAACCGAGTTTTTGTCACATCCAATATTCGAAACCAAGACTTTAGGGTGGGATCCGAACCCTCTCACCATTCGAAACAAGCTTTGTTGGTCCGAAATGCTAGTTTAAAGTCAACCTAAATTATTAGATAAAGATGAAAAATCTCAACTACTCATATTATATTTTTAAATAAATCCCAAGATTATAATTATTGGTACACCAGTGAGAAACTAAACATAAAAAAAACACCAGTCAGGAACTTGTTTGCTTCCCTGCCATGGTGCGTTCGTTATAGGCGAAACGTTACTAACGCGTGTTGTTGAAAACTTGAAATTGAAGTGCAATGGTAGAATGAATCGAGAAAGCATCCAAATCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02536.17	mTERF	57	258	2.50E-34
PF02536.17	mTERF	291	382	2.50E-34

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Gene Ontology

GO term	Description	Category
GO:0003924	GTPase activity	Molecular Function
GO:0005525	GTP binding	Molecular Function
GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	Biological Process
GO:0007017	microtubule-based process	Biological Process
GO:0007010	cytoskeleton organization	Biological Process

InterPro

InterPro term	Description
IPR003690	Transcription termination factor, mitochondrial/chloroplastic
IPR038538	MTERF superfamily, mitochondrial/chloroplastic

trEMBL

trEMBL term	Description
A0A1S2XF78	_

SwissProt

SwissProt term	Description
MTEFE_ARATH	Transcription termination factor MTERF15, mitochondrial

KEGG

KO	Description	Enzyme
K15031	mitochondrial transcription termination factor family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G74120	Mitochondrial transcription termination factor family protein
Medicago sativa L.	MsG0080048923.01.T02	_
Oryza sativa L.	LOC_Os12g30610.1	expressed protein
Cucumis sativus L.	Csa001647	_
Glycyrrhiza uralensis Fisch.	Glyur000215s00017027.1	_
Codonopsis lanceolata	Cl_chr02_49830T	_
Arachis hypogaea L.	AH11G03430.1	uncharacterized protein LOC101513737 like

Expression pattern