| Gene ID | Annotation |
|---|---|
| Am06G018780.1 | Transducin/WD40 repeat-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G018780.1 | mRNA | Chr06 | 102089971 | 102101507 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00400.35 | WD40 | 114 | 148 | 3.30E-33 |
| PF00400.35 | WD40 | 169 | 205 | 3.30E-33 |
| PF20426.1 | NBCH_WD40 | 117 | 301 | 4.70E-12 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| GO term | Description | Category |
|---|---|---|
| GO:0005848 | mRNA cleavage stimulating factor complex | Cellular Component |
| GO:0031124 | mRNA 3'-end processing | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR019775 | WD40 repeat, conserved site |
| IPR001680 | WD40 repeat |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR044633 | Cleavage stimulation factor subunit 1-like |
| trEMBL term | Description |
|---|---|
| A0A1S2XHB7 | _ |
| SwissProt term | Description |
|---|---|
| CTF50_ARATH | Cleavage stimulation factor subunit 50 |
| KO | Description | Enzyme |
|---|---|---|
| K14406 | cleavage stimulation factor subunit 1 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G60940 | Transducin/WD40 repeat-like superfamily protein |
| Medicago sativa L. | MsG0280009331.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g54770.1 | WD domain, G-beta repeat domain containing protein, expressed |
| Cucumis sativus L. | Csa004343 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000215s00017030.1 | _ |
| Codonopsis lanceolata | Cl_chr02_62360T | _ |
| Arachis hypogaea L. | AH20G30230.1 | Cleavage stimulation factor subunit 50 like |