| Gene ID | Annotation |
|---|---|
| Am06G018570.1 | Pectin lyase-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G018570.1 | mRNA | Chr06 | 99273155 | 99275261 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00295.20 | Glyco_hydro_28 | 50 | 384 | 1.10E-97 |
| Gene family | Subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH28 |
| GO term | Description | Category |
|---|---|---|
| GO:0071555 | cell wall organization | Biological Process |
| GO:0006090 | pyruvate metabolic process | Biological Process |
| GO:0046034 | ATP metabolic process | Biological Process |
| GO:0046496 | nicotinamide nucleotide metabolic process | Biological Process |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process |
| InterPro term | Description |
|---|---|
| IPR011050 | Pectin lyase fold/virulence factor |
| IPR012334 | Pectin lyase fold |
| IPR006626 | Parallel beta-helix repeat |
| IPR000743 | Glycoside hydrolase, family 28 |
| trEMBL term | Description |
|---|---|
| A0A1S2XF37 | _ |
| SwissProt term | Description |
|---|---|
| PGLR_MEDSA | Polygalacturonase |
| KO | Description | Enzyme |
|---|---|---|
| K01213 | galacturan 1,4-alpha-galacturonidase | [EC: 3.2.1.67] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G07820 | Pectin lyase-like superfamily protein |
| Medicago sativa L. | MsG0280009272.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g40880.1 | polygalacturonase, putative, expressed |
| Cucumis sativus L. | Csa008306 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000543s00030828.1 | _ |
| Codonopsis lanceolata | Cl_chr07_10530T | _ |
| Arachis hypogaea L. | AH10G22800.1 | Polygalacturonase like |