| Gene ID | Annotation |
|---|---|
| Am06G018400.1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am06G018400.1 | mRNA | Chr06 | 98013401 | 98014978 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01535.23 | PPR | 179 | 208 | 2.80E-43 |
| PF01535.23 | PPR | 210 | 240 | 2.80E-43 |
| PF13041.9 | PPR_2 | 69 | 116 | 2.50E-42 |
| PF13041.9 | PPR_2 | 176 | 208 | 2.50E-42 |
| PF13041.9 | PPR_2 | 207 | 245 | 2.50E-42 |
| PF13041.9 | PPR_2 | 310 | 356 | 2.50E-42 |
| PF12854.10 | PPR_1 | 177 | 204 | 2.10E-18 |
| PF20431.1 | E_motif | 429 | 491 | 2.60E-13 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0009451 | RNA modification | Biological Process |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0043231 | intracellular membrane-bounded organelle | Cellular Component |
| GO:0004519 | endonuclease activity | Molecular Function |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR046960 | Pentatricopeptide repeat-containing protein At4g14850-like, plant |
| IPR002885 | Pentatricopeptide repeat |
| IPR046848 | E motif |
| trEMBL term | Description |
|---|---|
| A0A2K3PJ54 | _ |
| SwissProt term | Description |
|---|---|
| PP449_ARATH | Pentatricopeptide repeat-containing protein At5g66520 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G66520 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Medicago sativa L. | MsG0280009168.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g36350.1 | pentatricopeptide, putative, expressed |
| Cucumis sativus L. | Csa002734 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000484s00024952.1 | _ |
| Codonopsis lanceolata | Cl_chr01_11820T | _ |
| Arachis hypogaea L. | AH04G06450.1 | Pentatricopeptide repeat-containing protein At5g48910 like |