Gene detail

Detail information of Am06G017140.1 Annotation

Gene ID	Annotation
Am06G017140.1	Leucine-rich repeat transmembrane protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G017140.1	mRNA	Chr06	82080416	82084730	+

Sequences

CDS:

>Am06G017140.1
ATGGAGATTTTCAAATTCATGTATTTTAATTTCCTCATCACTTTCATGTTTTCAGCTGTTTTAGCAATTGATCCTTATTCAGAGGCACTCCTAAGCCTTAAATCTGAGCTTGTAGATTATGATAACAGTTTGCATGACTGGATGATGATACCCTCTGGAACGAACTTAACTGTGTGTTCTTGGTCAGGTATCAAGTGTAACAACAAGGACAAAATTGTAACTTCCATTGACCTGTCTATGAAAAAATTGGGGGGTGTATTATCAGGAAAGCAATTCTGTGTTTTCACAAAGCTTGTTGATCTCAACTTGAGCCACAATTTCTTTTCTGGACAATTTCCAGCTGGAATTTTCAACCTCACAAGCTTGAAGAGCTTGGATATCAGCAGAAACAATTTTTCTGGTCACTTCCCAGGAGGAATTTCTAGACTACCAAATTTGGTTGTGCTTGATGCTTTTAGCAACAGCTTTTCTGGGCCATTGCCTGTTGAATTTTCAGAATTGGGATCTCTTAAGGTTCTTAAACTAGCTGGAAGTTACTTTAGAGGATCAATTCCATCTGAATATGGTTCTTTTAGAAACCTAGAGTTTCTTCATCTAGCAGGAAATTCACTCACTGGAAGTTTACCTCCAGAGCTTGGTAACCTCAAAACAGTGAAACACATGGAGATTGGTTACAATTTTTACCAGGGTTTTATTCCACCAGAAATAGGTAATATGAGTCAGCTACAGTATCTTGATATAGCAGGTGCAAATCTATCTGGTACTATTTCAAAAGAACTATCCAATCTCATAGTTTTGCAAACACTTTTTCTCTTCAGAAACCAACTTACAGGACCAATACCAAGTGAGTTCAGCAAAATTAAGCCTCTCAGAAATTTAGATCTCTCTGATAACTATCTTTCAGGGTCTATTCCTGAAAGCTTTTCTGAGTTAAAGAACCTAAGACTGCTGAGTCTCATGTATAATGACATGAGTGGCACTGTTCCAGAAAGCATTGCTCAACTACCATCGTTGGAAACTCTTCTTATTTGGAACAATGGCTTCTCAGGATCACTTCCAGAGAGCTTAGGCAGGAATTCCAAACTCAAGTGGGTTGATGTTTCCACAAACAATTTCAGCGGTAGTATACCACGAGACATTTGTGTAGGTGGAGTACTATTTAAGCTAATATTGTTTTCAAACAAATTCACAGGTAGTCTTTCCCCAATCTCCAATTGTTCTTCCTTAGTTCGTCTTCGCATAGAAGATAATTCATTCTCTGGAGAGATCCCTTTGAAATTCAGCCATCTTAATGATATCTCATATATTGATCTGTCAAGTAACAATTTTGTGGGTGGGATTCCTTCAGATATTTCTCAAGCTACTCAATTGGAGTATTTCAATGTCTCTTATAATATACAACTAGGAGGCACAATCCCTTCACAAATTTGGTCTTTGCCATTACTTCAAAATTTCTCAGCATCATCTTGTGGTCTTTTAGGAAGTATTCCTTCATTTGAGTCCTGCAAATCAATTTCAGTTATTGATCTTGATAGCAATAACTTATCTGGAAAAATCCCAAACAGTGTTTCCCATTGTCAAGCTCTTGATACAATCAAATTATCTAACAATAAACTCACAGGTCAAATACCTGAGGAGCTTAGTTCATTAAGTTTACAATTTTTCAATGTGTCTTTCAATAATATATCAGGTTCAATACCAAAAGGAAAGTCATTCAAATCAATCGATAGCAGTGCATTTATTGGAAATTCAGAGCTATGTGGAGCACCTTTGAGACCATGTCCTGATTCAGTTGGAATATTGAGCAACAAAAGCACATGGAAGGTTACACATATTGTGTTACTTACTGTAGGGTTGTTAATAATCCTTCTAGGATTGGCTTTTGGAATACTTCATTTCAGAAAGGGTGTTAAAAATCAATGGAAGATGGTTTCATTTGTTGGACTCCCTCAATTCACAGCAAATGATGTTTTGACAAGCTTCAGTACCACTGAACATAAAGAAGTTACAATTACAAAAGCAGTTCTTCCTACAGGTATAACAGTTTTAGTCAAGAAGATTGAATGGGAAGTGAAGAGCATTAAAATGGTGTCTGAATTTATAACGCGACTAGGAAATGCAAGGCACAAGAATTTAATCAGATTGTTGGGTTTTTGTCACAATAAGAACCTAGTTTATGTTTTGTATGACTACTTGCCTAATGGGAATTTGGCTGACAAAATTGGAATGAAATGGGATTGGGGAGCTAAATTCAGAACAGTGGTTGGGATTGCAAGGGGACTTTGTTTCCTTCACCATGATTGTTACCCAGCTATACCCCATGGTGACTTGAAGTCCAGCAATGTTGTATTTGATGAAAATATGGAACCCTATTTGGCAGAATTTGGGTTCGAACATATGTTACAGTTGAGCAAAGGCTCATTTCCAGCAACAACTAATAGCATAACAGAATACAATGAAGCAATGAAAGAGGAACTCAGCATGGATGTCTACAATTTTGGAGAGATGATTCTGGAAATCTTAACTGGTGGGAGGTTGACAAATGCGGCAGCTAGCATTCACAGAAAATCACAGGAAGTTCTTCTAAGAGAAATTTACAATGATAATGAAGTGAGTTCTACAAGCTCATTACAAGAGGTTAAACTGGTGCTTGAGGTTGCTGTGCTTTGCACTAGAAGCAGATCATCTGATCGGCCATCAATGGAAGAGGCTCTGAAACTTTTGTCAGGGTTAAAGCATCTTGAAGTTGGCATAACTTCAAAATAA

Protein:

Promoter(3k):

>AM06G017140.1
CTTGTAGGAGTTACACACCAGAGGAAGCATGGTCAGGGAAGAAACCAAGTGTTGGTCACCTCAGAGTTTTTGGTTCTATCTGTGATAGGCATGTGCCTGAGAAAAAACAGAAGAAAATTAGATGATTGGTCTCAGCAGATGGTGCTAGTTGGTTAATCCTCAACAGGTGCTTATAAATTGTATGATCCTAAGACAAAGAAGGTTGCAAACTACAAAGCAAGTTGAGAAGAGTTGGAATTGGAACTCAGTTGATTCTAAGTCTGCAGAAGAGAAAATTACACTTGAGTTAGAGAGTGGAATTTGTTCTGGTTCTTCAGAAACTGTGGGTGAAGGTGAGCAGTTGAGAAGATTTGCTAGACAAAGACAGCAGCCTTCAAGGTTGAATGATTATGAGTTGTTTCCTGATGTTTCTATAACAGAAGAAGGTGATCTGTTAAACATTGATGGCAGAAATTGAACCAGTAAGTGTGGAACAAGCTCTGAGCAATGTGCATTGGAAGGCAGCCATGATTGATGAGCTGAAATCAATCAAGAAGAATGATACTTGGGAGCTAGTGCCACTGCCAAGTAACAAGAAGGCCATAGATGTGAAGTGGGTCTTCAAGACTAAGCTGAAACCTAATGGAGAGGTAGCAAACTACAAAGCAAGGCTCGTAGTGAAGGGTTTTATGCAGATACCAGGGCTTAATTTCAATGAGGTTTATGCTCCATTTTCTAGGATAGAAACTGTGAGGCTTGTTGTTGCTATAACAAGCAAAAAGGGATGGACATTGAGTCAATTGGATGTCAGATCCGCTTTTCTCAATGGTCCACTAGATAAAGAAGTGTATGTCTGTCAGCCACCTGAATTTGAAAACAAGAAGCACGGTGATAAGGTGTATAAACTGAGGAAAGCTCTATATGGCTTTAAACAGGCGCCAAGAGCCTGGAACAAGCGTATAGATTGATTTCTAATTCAGCTGAAGTTTGTGAAATGAATTTATGAACACGGGTTGTATATGAAGCAGCTTCATGGTGATGGTATGATTCTAATTTGCCTCTATGTTGATGATTTATTGGTAACTAGATTCAGAAATTTAAGAAGTGTATGATGGAGGAGTTTGATATGAGTGATCTTGGTGAGCTGTCTTACTTCTTGGGAATGGAATTCAAGGCAACCAGTAAGGGAATTTTCCTACATCAAAGGAAATATGCAAATGACATTATTTTGAAGAGATTTAGAATGATAGATTGCAACCCTGCATCAACTCCAGCAAAGGCAGGACTGAAGCTCTGCAGAGATGATTCTGAGGCAGCAGTTGATGCAACTTTGTATAAACAAATTGTGGGGTCTTTGAGGTATTTGTGCAAAACAAGACTTGATCTAGCTTTTAGTGTTGGGCTGATTAGCAGATTCATGGACCAACCAAGTGTATCTCACTTGAATGCTGCTAAAAGAGTCCTTAGATACGTTAAGGGAATAGCAAATATGGGAATATTGTTCCCTGGCTGCAGTGACAAGTCTAGTGCAGAGATTTCTGGTTTCACGGATTTTGATTAGTGCGGTGATAAGGATGATAGAAAGAGTACAGTTGGGTACTTGTTCATGTATGGGAAGGCACCAGTGTCATGAAATTCGAGGAAACAAAGTGTTGTTGCTTTGTCATCCTTTGAAGCAGAATATATAGCTTGACATGTTACTGAATGAGTTGAAGATGGGCAAGGAAAGTGCAGTAAAGCTATTTGTGGGCAACAAATTAGCTATTGATCTTGCTAAGCATCCAGCTGCACATGGAAGAAGCAAACATATTGAGACTAAGTTTCACTTTCTAAGGGATCAAGTGGACAAGGAAAGGTTACTGGTGGAGCACTGCAGTTCTGAGGAACAGCTTGCAGATATGCTGACCAAACCCTTGAAGATTGGAAGGTTCAAGCGGCTAAGAGACAAGATAGGGATGGTCACATTAACTAGCATGAATTAGGGGGTGTGTTGAAGTAATTCATTTACTAATTTTATTAGCTTTACTTAGTTAAGTAGCTGCTGAGTATTGTTTACGGCTTAATTGTATTTTTTACTTCTTTAAGCATTGTAGTCGTACACCCTTAGTATAAAAGGGAATCTCTGTAACCATTTTTCATAAGTGCAATAATACAGATTCTTTCCCACCAATTCTGTTACAGATTCTCTCTGAAATTCTCTCTTCCTCTCTCAAGTGTTGGTGAGTGTGTGAGAATTCCCCAATTCTCTCTCAGTCTGTGCAAGAATCACGGATTGTTCCCACATCATTATCTCTCATATTAGGCTTTAAACCATAAAAACTTATTAAAGAATATTGAAGTTTGTCTCAGTCCCTTAATAAAAGTTCCTAAAATTTGCTGTTTAGGAACTGAATTGATTAATGAAGATAGTTTTAGAGACTATTTAATAAATTTACATAATTGAAGACTAAATAAGAAAATAAGTGATATAGGGACTTAAATTGAAACTATGTTCATTTTCTCACATTAGATTTACCCCACATTACTCGATTCAGAAATTTTGCTTTCTGTTCAATCGAAAAATGCCATGCAACGGACCTTTTATTATAATCTCGATCCATACAAGGACATGGATATGGACGAAGTTGATCCCTGTTCCACAAGGCACGGAATAAAGATTAAAGTTTGAATTAACCATGACGTTTCTTATGGGATTCTCTTTCTCCCCAAATGAAAAAGTTGAGAAAAGTTAATATCCGATTTGAAGGCTTTATTCCTTAGTGGCAAACACCATTCAAAAAAATAAACATAACAGGGTCCCCTCTTGCGCCTAAAAGCAACCCAAATAATATTCTCAAACCAACAAATCAATCAGAAGATAAAATAGTCATTCTCTTCTTTCACATGTACAGTACCACTCATTTCCTTTCCTTTTCTCTATTCCCCATGCATTCCTCATACAACAAAACAAAATATACATAACTTATTTTATACTGACACACACCAAACTCCACTCCACTCTATTGTGCTCTTCAATTTCCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13855.9	LRR_8	97	155	1.90E-36
PF13855.9	LRR_8	266	323	1.90E-36
PF13855.9	LRR_8	505	562	1.90E-36
PF00069.28	Pkinase	677	906	1.90E-16
PF07714.20	PK_Tyr_Ser-Thr	678	906	3.10E-16
PF08263.15	LRRNT_2	28	67	8.90E-07

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.12.4:RLK-Pelle_LRR-XI-1

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:2000604	negative regulation of secondary growth	Biological Process
GO:0006952	defense response	Biological Process
GO:0051707	response to other organism	Biological Process
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0AAN9PNQ9	_

SwissProt

SwissProt term	Description
TDR_ARATH	Leucine-rich repeat receptor-like protein kinase TDR

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G51350	Leucine-rich repeat transmembrane protein kinase family protein
Medicago sativa L.	MsG0280008862.01.T01	_
Oryza sativa L.	LOC_Os08g05290.1	receptor-like protein kinase 5 precursor, putative, expressed
Cucumis sativus L.	Csa006646	_
Glycyrrhiza uralensis Fisch.	Glyur000441s00028792.1	_
Codonopsis lanceolata	Cl_chr08_25870T	_
Arachis hypogaea L.	AH03G19570.1	Leucine-rich repeat receptor-like protein kinase TDR like

Expression pattern