Detail information of Am06G016560.1 Annotation
Gene IDAnnotation
Am06G016560.1 nucleolar essential protein-related
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am06G016560.1mRNAChr067327420973276821-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF03587.17EMG1712681.30E-71
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0070037rRNA (pseudouridine) methyltransferase activityMolecular Function
GO:0070475rRNA base methylationBiological Process
GO:0032040small-subunit processomeCellular Component
GO:0005730nucleolusCellular Component
GO:0019843rRNA bindingMolecular Function

InterPro
InterPro termDescription
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR005304Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029028Alpha/beta knot methyltransferases

trEMBL
trEMBL termDescription
I3TAC5 _

SwissProt
SwissProt termDescription
NEP1_MOUSERibosomal RNA small subunit methyltransferase NEP1

KEGG
KODescriptionEnzyme
K14568rRNA small subunit pseudouridine methyltransferase Nep1[EC: 2.1.1.260]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G57000 nucleolar essential protein-related
Medicago sativa L.MsG0280007445.01.T01 _
Oryza sativa L.LOC_Os02g18830.1ribosome biogenesis protein NEP1, putative, expressed
Cucumis sativus L.Csa002401 _
Glycyrrhiza uralensis Fisch.Glyur000504s00018082.1 _
Codonopsis lanceolataCl_chr03_04310T _
Arachis hypogaea L.AH12G18940.1Ribosomal RNA small subunit methyltransferase NEP1 like

Expression pattern