Gene detail

Detail information of Am06G016370.1 Annotation

Gene ID	Annotation
Am06G016370.1	cation-chloride co-transporter 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am06G016370.1	mRNA	Chr06	71172012	71204360	+

Sequences

CDS:

>Am06G016370.1
ATGGGAGACAGTGACATTGAAGGCGGTGGTGGTGGTAGTGGAGACGATGGTTTCCGCTCACCTATCGGTCGCAAGTATCGTCCTGTGTTGGCGAACGATCGTGCCGTGCTCGAGATGTCTTCAATGGATCCTGGATCTTCTTCTTCGGCTTCTACTTCTGCGTTTCCAGATCCTCCTAATCTCAGAAAAATAAATGTAGGTAAGAGTGTTAATGGGAGTTCAGATGCTAAAGAAGGAAACTCTACTAATCTGCCTCAGCCCAATGGACCCCAGCAGGAATCTAAACTGGAATTGTTCGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACTGGTGAGCAAGTTGCACCGCCATCTAGTCCTAGAGATGGTGAGGATATTACCATCCCTGTTGGGCTACCAAAGCCTGCTGCTCCCAAACTAGGTACAATGATGGGTGTATTCATTCCATGTGTGCAAAGCATTTTGGGCATCATCTACTACATTCGATTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGATACATTGTTGCTTGTTGCTTTGTGTGGCACTTGTACGTTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCTATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTTTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTCTACGTATTGGGAGCTGTAGAAACATTTTTGAAAGCGGTTCCTTCTGCTGGGATGTTTAGAGAGTCTATCTCACTAGTTAATGGTACTGCAATTGCACAACCGATAGAGAGTCCAAGTTCACATGACCTGCAAATTTATGGGATTGTGGCGACTATTGTGTTATGCTTTATTGTTTTTGGAGGAGTGAAGATGATAAATCGGGTTGCACCTGCATTTCTCATACCTGTTGTATTCTCACTCATCTGCATATATTTGGGGATCCTATTGGCAAAGAAGGATCATCCCACAGAGGGAATTACTGGCTTGAGTTTGGAGACTTTTAAAGAAAATTGGAGTTCAGATTATCAAAAGACGAATGATGCTGGAATTCCAGAAACTGATGGCTCTGTAAGCTGGAATTTCAATTCTTTGGTGGGCCTCTTTTTCCCAGCAGTTACTGGAATAATGGCAGGTTCTAATCGATCATCTTCTCTGAAAGATACTCAACGATCAATTCCTGTTGGAACTTTAGCTGCAACTCTTTCAACTTCTGCAATGTATCTTATATCTGTGATAATGTTTGGCGCCATTGCCACCAGAGAAAAGCTTTTAACTGACAGGCTACTTACAGCAACGGTTGCCTGGCCTTTTCCTTCATTAATTAAAATTGGGATTATTCTTTCAACCATGGGTGCTGCTCTCCAGTGCCTGACTGGTGCCCCACGTCTGCTTGCAGCTATAGCCAATGATGATATTTTACCTATTTTAAACTACTTCAAAGTTGCAGATGGCAGTGAGCCACATGTTGCTACCCTTTTTACCGCTTTCCTATGTATTGGGTGTGTTGTTATTGGGAATCTGGATCTTATCACTCCAACTGTGACTATGTTTTTCCTTCTGTGTTATTCTGGTGTCAACTTATCCTGCTTCCTACTCGATCTTCTTGATGCCCCTAGTTGGCGTCCTAGATGGAAACTTCACCATTGGAGTCTGTCACTTTTGGGAGCATTACTTTGTATAGTGATCATGTTCCTAATCTCTTGGTCATTCACTGTGGTTTCTTTGGTCCTTGCAAGCCTTATATATAAATATGTGAGTATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGCGCCTATTTCCAACTGGCACTTCGTAGCCTTCGGTCGCTAGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCAATTCCGCTTGTATTTTGTCGACCCTGGGGCAAATTGCCAGAAAATGTTCCCTGTCATCCCAAACTAGCAGATTTCGCTAACTGTATGAAGAAAAAAGGTCGAGGAATGACCATATTTGTCTCTATACTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAAGCTGCTTGTAAACAACTTAGCACCTACATTGAGTACAAGAATTGTGAAGGGGTGGCCGAGATTGTTGTAGCTCCTAACATGTCTGTAGGCTTTCGCGGCATTGTTCAGACAATGGGCCTTGGCAATCTCAAACCGAACATCGTGGTGATGCGTTATCCAGAAATCTGGCGCCGTGAGAACTTAACAGATATCCCCGCCACCTTTGTTGGGATAATTAATGACTGCATCGTTGCAAACAAGGCAGTAGTTATAGTGAAGGGTCTTGATGAATGGCCAAATGTGTACCAGAAGCAGTATGGTACTATTGATTTGTATTGGATTGTAAGAGATGGGGGCCTCATGCTGCTTCTCTCTCAATTGCTCCTTACCAAGGAGAGCTTTGAGAGTTGTAAGATTCAGGTTTTCTGTATTGCAGAAGACGATGCAGATGCAGAGGGGCTGAAAGCTGATGTTAAAAAATTCCTTTACGATCTTCGGATGCAAGCAGAAGTCTTTGTCATAACAATGAAATGGGATGCACAAGCGGATAGTGGGTCTCCACAAGATGAGTCATTAGAAGCATTTAATAGTGCTAACCAAAGAATTGTTGATTATTTAACGGAAATGAAGGCAACAGCAGAGAGAGACGGTACCCCTCTAATGGCAGATGGTAAAACCGTTATTGTAAACGAGAAGCAAGTCGAGAAGTTTCTATTTACAACGCTTAAGCTCAATTCTATAATTTTGAGATACTCAAGAATGGCTGCTGTTGTGTTAGTAAGTCTGCCACCCCCTCCAGTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTACTGGAGAATGTACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG

Protein:

>Am06G016370.1
MGDSDIEGGGGGSGDDGFRSPIGRKYRPVLANDRAVLEMSSMDPGSSSSASTSAFPDPPNLRKINVGKSVNGSSDAKEGNSTNLPQPNGPQQESKLELFGFDSLVNILGLKSMTGEQVAPPSSPRDGEDITIPVGLPKPAAPKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGDTLLLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGMFRESISLVNGTAIAQPIESPSSHDLQIYGIVATIVLCFIVFGGVKMINRVAPAFLIPVVFSLICIYLGILLAKKDHPTEGITGLSLETFKENWSSDYQKTNDAGIPETDGSVSWNFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLSTSAMYLISVIMFGAIATREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQCLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVVIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKLHHWSLSLLGALLCIVIMFLISWSFTVVSLVLASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMTIFVSILDGDYHECAEDAKAACKQLSTYIEYKNCEGVAEIVVAPNMSVGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTDIPATFVGIINDCIVANKAVVIVKGLDEWPNVYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEDDADAEGLKADVKKFLYDLRMQAEVFVITMKWDAQADSGSPQDESLEAFNSANQRIVDYLTEMKATAERDGTPLMADGKTVIVNEKQVEKFLFTTLKLNSIILRYSRMAAVVLVSLPPPPVSHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT*

Promoter(3k):

>AM06G016370.1
CAGTACTAGATCAATTGGTAGTGGGAATGCATTGAGCATGTACCTAAGCCTCAGGGTACATGGTTCGATTCCCACGAAAGGCAAAAACTCTACATGGGGGGTAGAGAAGATCTTGAGTGCATCGCTGGGTAGCCTACTAAGTAAGAAAAGGGCCCAGGATGTTACAAAAAAAGGCGCCTTTTGTAGGGTGCATATTGTCCAACCCAAGTTCAAAACATATCACTATGCCATACATAAACACTAGTAAATTACTTCTTTTTTACCAAATTACTAATATTGTTTAACTGTCTTCAATTATATTCCTTTTTGTTGATTATGGTTTGATGATCTATGGCCTTTTATAGTGAATTTGGTGATGTATCTGCTCCATTTTTTTTATTTGTCTATGCATGAATAGTTCACCACACTAAATAGTTAGTTTATTTGATGATCTATGGCTTTACTGTTAAGTTAGTTTATGAGACTAAATAGCCAAATAATAGTTCATGTTTGTCTATGATTATTCTTACATTTTAGTTCCACTCAAAACAGGTGTGTATTTAAATTGTATTCTAGTTATACGATAAGGCTCAAAGTGGTGGTGGTTTGAAGTCATGAATAATGTAATATGGAACAATATCATTTTTTTAAACAAAAAGTAAACAATATAAAATTTTATTTTTTAATAATCGTTGCGTACTATGCGGGCTAGCCCGAAAAGCCTGTGGCCCGCATAGGGCCGGGCTTGGGTCGTAAAGGTTGTGCCCGAATTTCAACCCAGGCTTTTTAGCCCTGTCCGTAAAAGCCCGAACCCGTGGTGGGCCAGTCCGATGTGGGCCGGGTAGCCCATTTTTCCAGCTCTAAAAGTAGTTATACTTTTCTGCACTTTTGCAGGAATTATGTACTTGCAACATAATGACTATCTTCTCATTCCCGAAGCTTCTTAGCATGAGCTTGACAAATTAAATGAAGGCATTCAATTTGTCTAATTTTTTCTTAGGCATTTATTATCCTTCATCGATGCTTCTAACTCTTAAGGTGATATATCCTCGTTTCTTCTATTCCAGAGAAGCTTCTTGTGATGTATCTTTCTATTTTTGAGAAGCTTCTTATTTTGAGTCTTCTTAGTCTGAGAAGCTTCATACTTTGTCTTCTAATTTTGAGAAGCTTCTTGATTTGAGTCTTCTAATCTAAAGAAGCTATTTGACTTGGCCATTCTCATTTTGAGAAGCTATTTGGCATGTGCCTTCTCATCTTTGAGAAGCTTCTTGAAATGTATATTCTCATTTTGAAAAACTACCATATCTGACTTGATGTTTCTATCTTCTCACTATTTGTAGGTCTTCATTCATAGCTTCTAAGGCTTCAATTAACCTTCTCATAAGGTGCTATCCTCATTCCTGAAGCTTCTTAGCAAGAGCTTGACAAATTAAATGAAGGCATTCAATTTGTCTCATTTTTTCTTAGGCATTTATTATCCTTCATAAATGCTTCTGACTCTTAAGGTGATATATCCTCGTGTCTTCTATTCTTGAGAAGCTTCTTGTGATGTATCTTTCGATTTTTGAGTAGCTTATTGACTTGAGTCTTCTAATCTTAAGAAACTATTTGACTTGGCCATTCTCTTCTTGAGAAGCTACTTGGCTTGTGCCTTCTCATCTTTTAGAAGCTTCTTGAAATGTATCTTCTCATTTTGAGAAACTACCATATCTAACTTGATGTTTCTATCTTCTCACTATTTGTAGGTCTTCATTCTTAGCTTCTAAGGCTTCAATTAACCTTCTCATAAGGTGCCATCCTAGCACATAATCTTCTTGATACTTGATTGAATAGTTCCTGTACTTTTGATACTCAAGAAGATTCATTAGAAAGGTTTGTTTACATCAAAACTCATCTTAGGGATTTTGCCTCAACATTTCCTAACTTGGTTTCTAATGATCTGAGTGAAACTGAAAAAGCCATATTCTCTTTTGGTTCTCTTAAAGCCCCGGTGGTTTTAGTGGTTTTTTTACCAGAAAAATTGGGGAGTTATTAAGGAGGATGTCACTAAGGCAGTGGCTTCTTTCTTTGAGTTTGGAGTATCTGGGTGATAATGTCAATATGACCCTAGTGGACCTCATCCCTAAAATTCATATGCCAGAGTCTATTTCCCATGTAAGACCTATTAACTGCTGTAATTTTCTATATAAAATTATTGCAAAGTTTATTGTCTCTAGACTTAAACCTATCATGGATAATACTGTGACTCCCACGAGAGTGACTTTGTGGGTGGGCGCCTTATTTAGGATAACCTTATTAAGGCCATCAGGCTATTCATTTCTTGAAAAGGAGTCACACAAGCGGGGTACACTTGAGGTGCTAGATCAATAATAAGAGCTTAGACTTGTATCCTAAAAGTGCTGAGTTCAAATCCCTTCGGTGACAGTTGTAATATAGCCATTAGTGCCACTTTATTATTAATAAAATATCCCCCTTCCCCAATTTTTTTGTTTTGGAGTTTTTTAAATCAAATTTGTGTCAAAAGAATCTTAATCCTTGTTTCAACGATTTCCTACTCCTACCAGGCTAATAGGTTTAAAAGCCGCTATTTGTTTAGCCACTAATTGTTTAATTTTTTACTTTTTATTTTAAAAGTTCCGAGTGATAAAAATCTAAAATGTACATAAAGAATATAAAAAATAGATTTTTCGTTCCTAAGAATAAAATACTTTTCTAATCCGAATATAATTACTGAAATTTTTATTCAAAAACTATGAATTTTCTTGCTTAACCTCCAAACAAACACTAAATTCCTGACTTTTCCTTCCACTTGTTTTCCGTCTCGTATTCACATTCCCTTCAATTTCAACGAAAGTGTATATCCGCATCTCTCCTCTCTCTCTCGCCCATCCTTATATCGTCGAGTAACAAGTATACACAATATAAACTGTGAGATTTCAATTTTCTGTTGCATATTCTTTCCGTTTCTGTTTCTGTTTCCTATTTCTGATTCAGATTTGTGTGATTGCATTAGATCGAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00324.24	AA_permease	149	625	6.30E-60
PF03522.18	SLC12	659	780	1.50E-38
PF03522.18	SLC12	791	989	1.50E-38
PF13520.9	AA_permease_2	155	587	6.40E-14

Gene family

Gene family	Subfamily
Transporter family	CCC

Gene Ontology

GO term	Description	Category
GO:0006884	cell volume homeostasis	Biological Process
GO:0055075	potassium ion homeostasis	Biological Process
GO:1990573	potassium ion import across plasma membrane	Biological Process
GO:0015079	potassium ion transmembrane transporter activity	Molecular Function
GO:0015373	monoatomic anion:sodium symporter activity	Molecular Function

InterPro

InterPro term	Description
IPR018491	SLC12A transporter, C-terminal
IPR004842	SLC12A transporter family
IPR004841	Amino acid permease/ SLC12A domain

trEMBL

trEMBL term	Description
A4VCJ8	_

SwissProt

SwissProt term	Description
CCC1_ORYSJ	Cation-chloride cotransporter 1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G30450	cation-chloride co-transporter 1
Medicago sativa L.	_	_
Oryza sativa L.	LOC_Os08g23440.1	amino acid permease family protein, putative, expressed
Cucumis sativus L.	Csa001581	_
Glycyrrhiza uralensis Fisch.	Glyur000388s00027960.1	_
Codonopsis lanceolata	Cl_chr03_54970T	_
Arachis hypogaea L.	AH03G25700.1	Cation-chloride cotransporter 1 like

Expression pattern