Detail information of Am06G016290.1 Annotation
Gene IDAnnotation
Am06G016290.1 VPS54
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am06G016290.1mRNAChr067002302070048085-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF07928.15Vps547398698.40E-46
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0019905syntaxin bindingMolecular Function
GO:0015031protein transportBiological Process
GO:0005829cytosolCellular Component
GO:0006896Golgi to vacuole transportBiological Process
GO:0000139Golgi membraneCellular Component

InterPro
InterPro termDescription
IPR012501Vacuolar protein sorting-associated protein 54, C-terminal
IPR039745Vacuolar protein sorting-associated protein 54

trEMBL
trEMBL termDescription
A0A1S2XEU7 _

SwissProt
SwissProt termDescription
VPS54_ARATHVacuolar protein sorting-associated protein 54, chloroplastic

KEGG
KODescriptionEnzyme
K17600vacuolar protein sorting-associated protein 54

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G19490 VPS54
Medicago sativa L.MsG0080047868.01.T01 _
Oryza sativa L.LOC_Os04g13470.1expressed protein
Cucumis sativus L. _ _
Glycyrrhiza uralensis Fisch.Glyur000522s00031206.1 _
Codonopsis lanceolataCl_chr03_10200T _
Arachis hypogaea L.AH03G28110.2Vacuolar protein sorting-associated protein 54, chloroplastic like

Expression pattern